RNA–Protein interactions for RNA: ENST00000491330.1

PDLIM2-217, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-217ENST00000491330 STRADAQ7RTN6 431 aa16.98■□□□□ 0.31
PDLIM2-217ENST00000491330 FAM131BQ86XD5 332 aa16.98■□□□□ 0.31
PDLIM2-217ENST00000491330 OXR1Q8N573 874 aa16.98■□□□□ 0.31
PDLIM2-217ENST00000491330 SH2D3CQ8N5H7 860 aa16.98■□□□□ 0.31
PDLIM2-217ENST00000491330 AOPEPQ8N6M6 819 aa16.98■□□□□ 0.31
PDLIM2-217ENST00000491330 SERAC1Q96JX3 654 aa16.98■□□□□ 0.31
PDLIM2-217ENST00000491330 C11orf70Q9BRQ4 267 aa16.98■□□□□ 0.31
PDLIM2-217ENST00000491330 TMEM59LQ9UK28 342 aa16.98■□□□□ 0.31
PDLIM2-217ENST00000491330 NOCTQ9UK39 431 aaKnown RBP16.98■□□□□ 0.31
PDLIM2-217ENST00000491330 DMTF1Q9Y222 760 aa16.98■□□□□ 0.31
PDLIM2-217ENST00000491330 HS3ST2Q9Y278 367 aa16.98■□□□□ 0.31
PDLIM2-217ENST00000491330 CBX4O00257 560 aa16.97■□□□□ 0.31
PDLIM2-217ENST00000491330 CD38P28907 300 aa16.97■□□□□ 0.31
PDLIM2-217ENST00000491330 GGCXP38435 758 aa16.97■□□□□ 0.31
PDLIM2-217ENST00000491330 GRK6P43250 576 aa16.97■□□□□ 0.31
PDLIM2-217ENST00000491330 JAM2P57087 298 aa16.97■□□□□ 0.31
PDLIM2-217ENST00000491330 STAT4Q14765 748 aa16.97■□□□□ 0.31
PDLIM2-217ENST00000491330 CDO1Q16878 200 aa16.97■□□□□ 0.31
PDLIM2-217ENST00000491330 KIF19Q2TAC6 998 aa16.97■□□□□ 0.31
PDLIM2-217ENST00000491330 RWDD4Q6NW29 188 aaKnown RBP16.97■□□□□ 0.31
PDLIM2-217ENST00000491330 TFAP2DQ7Z6R9 452 aa16.97■□□□□ 0.31
PDLIM2-217ENST00000491330 C14orf80Q86SX3 495 aa16.97■□□□□ 0.31
PDLIM2-217ENST00000491330 PIP4K2CQ8TBX8 421 aa16.97■□□□□ 0.31
PDLIM2-217ENST00000491330 FRS2Q8WU20 508 aa16.97■□□□□ 0.31
PDLIM2-217ENST00000491330 RXFP2Q8WXD0 754 aa16.97■□□□□ 0.31
PDLIM2-217ENST00000491330 SCNM1Q9BWG6 230 aa16.97■□□□□ 0.31
PDLIM2-217ENST00000491330 ADAM33Q9BZ11 813 aa16.97■□□□□ 0.31
PDLIM2-217ENST00000491330 ATP13A1Q9HD20 1204 aa16.97■□□□□ 0.31
PDLIM2-217ENST00000491330 GDF3Q9NR23 364 aa16.97■□□□□ 0.31
PDLIM2-217ENST00000491330 PPARGC1AQ9UBK2 798 aaKnown RBP16.97■□□□□ 0.31
PDLIM2-217ENST00000491330 OR12D3Q9UGF7 316 aa16.97■□□□□ 0.31
PDLIM2-217ENST00000491330 NEUROG3Q9Y4Z2 214 aa16.97■□□□□ 0.31
PDLIM2-217ENST00000491330 FRYLO94915 3013 aa16.96■□□□□ 0.31
PDLIM2-217ENST00000491330 KPNA3O00505 521 aaPredicted RBP16.96■□□□□ 0.31
PDLIM2-217ENST00000491330 GJB3O75712 270 aa16.96■□□□□ 0.31
PDLIM2-217ENST00000491330 TNFAIP3P21580 790 aa16.96■□□□□ 0.31
PDLIM2-217ENST00000491330 ADRA1BP35368 520 aa16.96■□□□□ 0.31
PDLIM2-217ENST00000491330 PTPN9P43378 593 aa16.96■□□□□ 0.31
PDLIM2-217ENST00000491330 ADPRHP54922 357 aa16.96■□□□□ 0.31
PDLIM2-217ENST00000491330 FMO1Q01740 532 aa16.96■□□□□ 0.31
PDLIM2-217ENST00000491330 OVGP1Q12889 678 aa16.96■□□□□ 0.31
PDLIM2-217ENST00000491330 POLD3Q15054 466 aaPredicted RBP16.96■□□□□ 0.31
PDLIM2-217ENST00000491330 SETMARQ53H47 684 aaPredicted RBP16.96■□□□□ 0.31
PDLIM2-217ENST00000491330 ALFQ53S48 1182 aa16.96■□□□□ 0.31
PDLIM2-217ENST00000491330 HS1BP3Q53T59 392 aa16.96■□□□□ 0.31
PDLIM2-217ENST00000491330 C2CD6Q53TS8 623 aa16.96■□□□□ 0.31
PDLIM2-217ENST00000491330 DNAJC24Q6P3W2 148 aa16.96■□□□□ 0.31
PDLIM2-217ENST00000491330 DCUN1D2Q6PH85 259 aa16.96■□□□□ 0.31
PDLIM2-217ENST00000491330 Q6ZVU0 165 aa16.96■□□□□ 0.31
PDLIM2-217ENST00000491330 ZNF354CQ86Y25 554 aa16.96■□□□□ 0.31
PDLIM2-217ENST00000491330 TMIEQ8NEW7 156 aa16.96■□□□□ 0.31
PDLIM2-217ENST00000491330 C1orf216Q8TAB5 229 aa16.96■□□□□ 0.31
PDLIM2-217ENST00000491330 SLC30A5Q8TAD4 765 aa16.96■□□□□ 0.31
PDLIM2-217ENST00000491330 SLC20A1Q8WUM9 679 aa16.96■□□□□ 0.31
PDLIM2-217ENST00000491330 AGPAT1Q99943 283 aa16.96■□□□□ 0.31
PDLIM2-217ENST00000491330 FUCA2Q9BTY2 467 aa16.96■□□□□ 0.31
PDLIM2-217ENST00000491330 CEP44Q9C0F1 390 aa16.96■□□□□ 0.31
PDLIM2-217ENST00000491330 HSD3B7Q9H2F3 369 aa16.96■□□□□ 0.31
PDLIM2-217ENST00000491330 PREBQ9HCU5 417 aa16.96■□□□□ 0.31
PDLIM2-217ENST00000491330 MPP6Q9NZW5 540 aa16.96■□□□□ 0.31
PDLIM2-217ENST00000491330 PPM1HQ9ULR3 514 aa16.96■□□□□ 0.31
PDLIM2-217ENST00000491330 SNX11Q9Y5W9 270 aa16.96■□□□□ 0.31
PDLIM2-217ENST00000491330 IGLV3-10A0A075B6K4 115 aa16.95■□□□□ 0.3
PDLIM2-217ENST00000491330 CXorf51AA0A1B0GTR3 108 aa16.95■□□□□ 0.3
PDLIM2-217ENST00000491330 A0A1W2PQC6 194 aa16.95■□□□□ 0.3
PDLIM2-217ENST00000491330 RNGTTO60942 597 aaKnown RBP16.95■□□□□ 0.3
PDLIM2-217ENST00000491330 CNTN5O94779 1100 aa16.95■□□□□ 0.3
PDLIM2-217ENST00000491330 ENDOD1O94919 500 aa16.95■□□□□ 0.3
PDLIM2-217ENST00000491330 ITGAVP06756 1048 aa16.95■□□□□ 0.3
PDLIM2-217ENST00000491330 PROS1P07225 676 aa16.95■□□□□ 0.3
PDLIM2-217ENST00000491330 GPD1P21695 349 aa16.95■□□□□ 0.3
PDLIM2-217ENST00000491330 CHRNA3P32297 505 aa16.95■□□□□ 0.3
PDLIM2-217ENST00000491330 MAPKAPK2P49137 400 aa16.95■□□□□ 0.3
PDLIM2-217ENST00000491330 KLK7P49862 253 aa16.95■□□□□ 0.3
PDLIM2-217ENST00000491330 DNA2P51530 1060 aa16.95■□□□□ 0.3
PDLIM2-217ENST00000491330 GNA12Q03113 381 aa16.95■□□□□ 0.3
PDLIM2-217ENST00000491330 C1QBPQ07021 282 aaKnown RBP16.95■□□□□ 0.3
PDLIM2-217ENST00000491330 CLEC16AQ2KHT3 1053 aa16.95■□□□□ 0.3
PDLIM2-217ENST00000491330 EFHC2Q5JST6 749 aa16.95■□□□□ 0.3
PDLIM2-217ENST00000491330 NAPEPLDQ6IQ20 393 aa16.95■□□□□ 0.3
PDLIM2-217ENST00000491330 NEK5Q6P3R8 708 aa16.95■□□□□ 0.3
PDLIM2-217ENST00000491330 UNQ6494/PRO21346Q6UXR6 183 aa16.95■□□□□ 0.3
PDLIM2-217ENST00000491330 APTXQ7Z2E3 356 aaKnown RBP16.95■□□□□ 0.3
PDLIM2-217ENST00000491330 AADATQ8N5Z0 425 aa16.95■□□□□ 0.3
PDLIM2-217ENST00000491330 EMC1Q8N766 993 aa16.95■□□□□ 0.3
PDLIM2-217ENST00000491330 IQCDQ96DY2 449 aa16.95■□□□□ 0.3
PDLIM2-217ENST00000491330 ALG14Q96F25 216 aa16.95■□□□□ 0.3
PDLIM2-217ENST00000491330 EDEM3Q9BZQ6 932 aa16.95■□□□□ 0.3
PDLIM2-217ENST00000491330 OSBPL2Q9H1P3 480 aa16.95■□□□□ 0.3
PDLIM2-217ENST00000491330 VPS51Q9UID3 782 aa16.95■□□□□ 0.3
PDLIM2-217ENST00000491330 PCOLCE2Q9UKZ9 415 aa16.95■□□□□ 0.3
PDLIM2-217ENST00000491330 OR51B4Q9Y5P0 310 aa16.95■□□□□ 0.3
PDLIM2-217ENST00000491330 SPTBN2O15020 2390 aa16.95■□□□□ 0.3
PDLIM2-217ENST00000491330 PRAMEF26H0Y7S4 382 aa16.94■□□□□ 0.3
PDLIM2-217ENST00000491330 PCDHGA12O60330 932 aa16.94■□□□□ 0.3
PDLIM2-217ENST00000491330 IGHV4-34P06331 123 aa16.94■□□□□ 0.3
PDLIM2-217ENST00000491330 SRCP12931 536 aa16.94■□□□□ 0.3
PDLIM2-217ENST00000491330 RHOQP17081 205 aa16.94■□□□□ 0.3
PDLIM2-217ENST00000491330 NUMBP49757 651 aa16.94■□□□□ 0.3
PDLIM2-217ENST00000491330 AIF1P55008 147 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms