RNA–Protein interactions for RNA: ENST00000490557.1

HMGB1P38-201, Transcript of high mobility group box 1 pseudogene 38, humanhuman

BASIC

Gene HMGB1P38, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P38-201ENST00000490557 AADACL2Q6P093 401 aa5.31□□□□□ -1.56
HMGB1P38-201ENST00000490557 CYP26C1Q6V0L0 522 aa5.31□□□□□ -1.56
HMGB1P38-201ENST00000490557 TRAPPC11Q7Z392 1133 aa5.31□□□□□ -1.56
HMGB1P38-201ENST00000490557 LRRTM4Q86VH4 590 aa5.31□□□□□ -1.56
HMGB1P38-201ENST00000490557 SH3KBP1Q96B97 665 aa5.31□□□□□ -1.56
HMGB1P38-201ENST00000490557 HMCESQ96FZ2 354 aa5.31□□□□□ -1.56
HMGB1P38-201ENST00000490557 TWNKQ96RR1 684 aa5.31□□□□□ -1.56
HMGB1P38-201ENST00000490557 WDR83Q9BRX9 315 aaKnown RBP5.31□□□□□ -1.56
HMGB1P38-201ENST00000490557 LDHAL6BQ9BYZ2 381 aaPredicted RBP5.31□□□□□ -1.56
HMGB1P38-201ENST00000490557 CTDSP1Q9GZU7 261 aa5.31□□□□□ -1.56
HMGB1P38-201ENST00000490557 FOXP1Q9H334 677 aaPredicted RBP5.31□□□□□ -1.56
HMGB1P38-201ENST00000490557 TASP1Q9H6P5 420 aa5.31□□□□□ -1.56
HMGB1P38-201ENST00000490557 ZNF304Q9HCX3 659 aa5.31□□□□□ -1.56
HMGB1P38-201ENST00000490557 Q9N2J8 555 aa5.31□□□□□ -1.56
HMGB1P38-201ENST00000490557 VWA3AA6NCI4 1184 aa5.3□□□□□ -1.56
HMGB1P38-201ENST00000490557 CREB3O43889 395 aa5.3□□□□□ -1.56
HMGB1P38-201ENST00000490557 TULP3O75386 442 aa5.3□□□□□ -1.56
HMGB1P38-201ENST00000490557 MOSPD3O75425 235 aa5.3□□□□□ -1.56
HMGB1P38-201ENST00000490557 WNT1P04628 370 aa5.3□□□□□ -1.56
HMGB1P38-201ENST00000490557 ARSAP15289 507 aa5.3□□□□□ -1.56
HMGB1P38-201ENST00000490557 PRKCHP24723 683 aa5.3□□□□□ -1.56
HMGB1P38-201ENST00000490557 SLC16A2P36021 539 aa5.3□□□□□ -1.56
HMGB1P38-201ENST00000490557 MVDP53602 400 aa5.3□□□□□ -1.56
HMGB1P38-201ENST00000490557 TBL3Q12788 808 aaKnown RBP5.3□□□□□ -1.56
HMGB1P38-201ENST00000490557 IL13RA2Q14627 380 aa5.3□□□□□ -1.56
HMGB1P38-201ENST00000490557 PLK5Q496M5 336 aa5.3□□□□□ -1.56
HMGB1P38-201ENST00000490557 ENTPD8Q5MY95 495 aa5.3□□□□□ -1.56
HMGB1P38-201ENST00000490557 PIK3CD-AS1Q5SR53 167 aa5.3□□□□□ -1.56
HMGB1P38-201ENST00000490557 VWA5B1Q5TIE3 1220 aa5.3□□□□□ -1.56
HMGB1P38-201ENST00000490557 AAGABQ6PD74 315 aa5.3□□□□□ -1.56
HMGB1P38-201ENST00000490557 PIM3Q86V86 326 aa5.3□□□□□ -1.56
HMGB1P38-201ENST00000490557 GHDCQ8N2G8 530 aa5.3□□□□□ -1.56
HMGB1P38-201ENST00000490557 SLC25A41Q8N5S1 370 aa5.3□□□□□ -1.56
HMGB1P38-201ENST00000490557 SCAIQ8N9R8 606 aa5.3□□□□□ -1.56
HMGB1P38-201ENST00000490557 WIPF2Q8TF74 440 aaPredicted RBP5.3□□□□□ -1.56
HMGB1P38-201ENST00000490557 NOC3LQ8WTT2 800 aaKnown RBP5.3□□□□□ -1.56
HMGB1P38-201ENST00000490557 USP13Q92995 863 aaPredicted RBP5.3□□□□□ -1.56
HMGB1P38-201ENST00000490557 MASTLQ96GX5 879 aa5.3□□□□□ -1.56
HMGB1P38-201ENST00000490557 NLRP4Q96MN2 994 aa5.3□□□□□ -1.56
HMGB1P38-201ENST00000490557 CD180Q99467 661 aa5.3□□□□□ -1.56
HMGB1P38-201ENST00000490557 NPLQ9BXD5 320 aaPredicted RBP5.3□□□□□ -1.56
HMGB1P38-201ENST00000490557 HIPK3Q9H422 1215 aa5.3□□□□□ -1.56
HMGB1P38-201ENST00000490557 STN1Q9H668 368 aaKnown RBP5.3□□□□□ -1.56
HMGB1P38-201ENST00000490557 ALKBH4Q9NXW9 302 aa5.3□□□□□ -1.56
HMGB1P38-201ENST00000490557 UPB1Q9UBR1 384 aa5.3□□□□□ -1.56
HMGB1P38-201ENST00000490557 AFG3L2Q9Y4W6 797 aa5.3□□□□□ -1.56
HMGB1P38-201ENST00000490557 RRN3P2A6NIE6 340 aa5.29□□□□□ -1.56
HMGB1P38-201ENST00000490557 TLX3O43711 291 aaPredicted RBP5.29□□□□□ -1.56
HMGB1P38-201ENST00000490557 KIF1CO43896 1103 aaKnown RBP5.29□□□□□ -1.56
HMGB1P38-201ENST00000490557 CKMT1AP12532 417 aa5.29□□□□□ -1.56
HMGB1P38-201ENST00000490557 CNTFP26441 200 aa5.29□□□□□ -1.56
HMGB1P38-201ENST00000490557 MAP3K21Q5TCX8 1036 aa5.29□□□□□ -1.56
HMGB1P38-201ENST00000490557 ATG16L1Q676U5 607 aa5.29□□□□□ -1.56
HMGB1P38-201ENST00000490557 C11orf87Q6NUJ2 197 aa5.29□□□□□ -1.56
HMGB1P38-201ENST00000490557 MMP21Q8N119 569 aa5.29□□□□□ -1.56
HMGB1P38-201ENST00000490557 CMASQ8NFW8 434 aaPredicted RBP5.29□□□□□ -1.56
HMGB1P38-201ENST00000490557 FAR1Q8WVX9 515 aa5.29□□□□□ -1.56
HMGB1P38-201ENST00000490557 RNFT2Q96EX2 444 aa5.29□□□□□ -1.56
HMGB1P38-201ENST00000490557 TEFMQ96QE5 360 aaKnown RBP5.29□□□□□ -1.56
HMGB1P38-201ENST00000490557 REEP2Q9BRK0 252 aa5.29□□□□□ -1.56
HMGB1P38-201ENST00000490557 C1QTNF7Q9BXJ2 289 aa5.29□□□□□ -1.56
HMGB1P38-201ENST00000490557 FZD3Q9NPG1 666 aa5.29□□□□□ -1.56
HMGB1P38-201ENST00000490557 RNF146Q9NTX7 359 aa5.29□□□□□ -1.56
HMGB1P38-201ENST00000490557 PCSK5Q92824 1860 aa5.28□□□□□ -1.56
HMGB1P38-201ENST00000490557 C11orf97A0A1B0GVM6 126 aaPredicted RBP5.28□□□□□ -1.56
HMGB1P38-201ENST00000490557 A0A1W2PPC1 479 aa5.28□□□□□ -1.56
HMGB1P38-201ENST00000490557 DHX16O60231 1041 aaKnown RBP5.28□□□□□ -1.56
HMGB1P38-201ENST00000490557 TMCC1O94876 653 aa5.28□□□□□ -1.56
HMGB1P38-201ENST00000490557 NDUFB8O95169 186 aa5.28□□□□□ -1.56
HMGB1P38-201ENST00000490557 CHRNB1P11230 501 aa5.28□□□□□ -1.56
HMGB1P38-201ENST00000490557 TRPC3Q13507 836 aa5.28□□□□□ -1.56
HMGB1P38-201ENST00000490557 SEMA3AQ14563 771 aa5.28□□□□□ -1.56
HMGB1P38-201ENST00000490557 ZNF425Q6IV72 752 aa5.28□□□□□ -1.56
HMGB1P38-201ENST00000490557 COLCA1Q6ZS62 124 aa5.28□□□□□ -1.56
HMGB1P38-201ENST00000490557 KDELC2Q7Z4H8 507 aa5.28□□□□□ -1.56
HMGB1P38-201ENST00000490557 CAMK1DQ8IU85 385 aa5.28□□□□□ -1.56
HMGB1P38-201ENST00000490557 TMEM199Q8N511 208 aa5.28□□□□□ -1.56
HMGB1P38-201ENST00000490557 NRACQ8N912 160 aa5.28□□□□□ -1.56
HMGB1P38-201ENST00000490557 ZNF548Q8NEK5 533 aaPredicted RBP5.28□□□□□ -1.56
HMGB1P38-201ENST00000490557 TMEM174Q8WUU8 243 aa5.28□□□□□ -1.56
HMGB1P38-201ENST00000490557 IGFBPL1Q8WX77 278 aa5.28□□□□□ -1.56
HMGB1P38-201ENST00000490557 LPAR1Q92633 364 aa5.28□□□□□ -1.56
HMGB1P38-201ENST00000490557 FCRL4Q96PJ5 515 aa5.28□□□□□ -1.56
HMGB1P38-201ENST00000490557 FRG2BQ96QU4 278 aa5.28□□□□□ -1.56
HMGB1P38-201ENST00000490557 TTC12Q9H892 705 aaPredicted RBP5.28□□□□□ -1.56
HMGB1P38-201ENST00000490557 SPAG4Q9NPE6 437 aa5.28□□□□□ -1.56
HMGB1P38-201ENST00000490557 PNRC2Q9NPJ4 139 aaKnown RBP5.28□□□□□ -1.56
HMGB1P38-201ENST00000490557 SEMA4BQ9NPR2 832 aaPredicted RBP5.28□□□□□ -1.56
HMGB1P38-201ENST00000490557 TLR8Q9NR97 1041 aaKnown RBP5.28□□□□□ -1.56
HMGB1P38-201ENST00000490557 CD207Q9UJ71 328 aa5.28□□□□□ -1.56
HMGB1P38-201ENST00000490557 CDH22Q9UJ99 828 aa5.28□□□□□ -1.56
HMGB1P38-201ENST00000490557 GTF2A1LQ9UNN4 478 aa5.28□□□□□ -1.56
HMGB1P38-201ENST00000490557 RAP2CQ9Y3L5 183 aa5.28□□□□□ -1.56
HMGB1P38-201ENST00000490557 LRRFIP2Q9Y608 721 aaKnown RBP5.28□□□□□ -1.56
HMGB1P38-201ENST00000490557 SLC4A4Q9Y6R1 1079 aa5.28□□□□□ -1.56
HMGB1P38-201ENST00000490557 IGLV5-39A0A0G2JS06 123 aa5.27□□□□□ -1.57
HMGB1P38-201ENST00000490557 TMEM272A0A1B0GTI8 110 aa5.27□□□□□ -1.57
HMGB1P38-201ENST00000490557 OR6C68A6NDL8 312 aa5.27□□□□□ -1.57
HMGB1P38-201ENST00000490557 A6NNC1 897 aa5.27□□□□□ -1.57
HMGB1P38-201ENST00000490557 ZNF814B7Z6K7 855 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms