RNA–Protein interactions for RNA: ENST00000490398.5

COL9A3-214, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 4

Gene COL9A3, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-214ENST00000490398 C4orf47A7E2U8 309 aa18.57■□□□□ 0.56
COL9A3-214ENST00000490398 METTL12A8MUP2 240 aa18.57■□□□□ 0.56
COL9A3-214ENST00000490398 TM4SF5O14894 197 aa18.57■□□□□ 0.56
COL9A3-214ENST00000490398 FOXD2O60548 495 aaPredicted RBP18.57■□□□□ 0.56
COL9A3-214ENST00000490398 CFIP05156 583 aa18.57■□□□□ 0.56
COL9A3-214ENST00000490398 SLC8A1P32418 973 aa18.57■□□□□ 0.56
COL9A3-214ENST00000490398 VASPP50552 380 aaPredicted RBP18.57■□□□□ 0.56
COL9A3-214ENST00000490398 LIMK1P53667 647 aa18.57■□□□□ 0.56
COL9A3-214ENST00000490398 ARF5P84085 180 aa18.57■□□□□ 0.56
COL9A3-214ENST00000490398 SCAPQ12770 1279 aa18.57■□□□□ 0.56
COL9A3-214ENST00000490398 CA9Q16790 459 aa18.57■□□□□ 0.56
COL9A3-214ENST00000490398 TDRD12Q587J7 1177 aaKnown RBP18.57■□□□□ 0.56
COL9A3-214ENST00000490398 C6orf118Q5T5N4 469 aa18.57■□□□□ 0.56
COL9A3-214ENST00000490398 DAB2IPQ5VWQ8 1189 aa18.57■□□□□ 0.56
COL9A3-214ENST00000490398 SLC23A3Q6PIS1 610 aa18.57■□□□□ 0.56
COL9A3-214ENST00000490398 DGLUCYQ7Z3D6 616 aa18.57■□□□□ 0.56
COL9A3-214ENST00000490398 CADM4Q8NFZ8 388 aa18.57■□□□□ 0.56
COL9A3-214ENST00000490398 DNASE2BQ8WZ79 361 aa18.57■□□□□ 0.56
COL9A3-214ENST00000490398 SYN2Q92777 582 aaPredicted RBP18.57■□□□□ 0.56
COL9A3-214ENST00000490398 ZNF653Q96CK0 615 aa18.57■□□□□ 0.56
COL9A3-214ENST00000490398 RTKNQ9BST9 563 aa18.57■□□□□ 0.56
COL9A3-214ENST00000490398 NEUROG2Q9H2A3 272 aa18.57■□□□□ 0.56
COL9A3-214ENST00000490398 CAPN10Q9HC96 672 aa18.57■□□□□ 0.56
COL9A3-214ENST00000490398 FBXL12Q9NXK8 326 aa18.57■□□□□ 0.56
COL9A3-214ENST00000490398 ARHGAP20Q9P2F6 1191 aa18.57■□□□□ 0.56
COL9A3-214ENST00000490398 MYO1AQ9UBC5 1043 aa18.57■□□□□ 0.56
COL9A3-214ENST00000490398 HS3ST2Q9Y278 367 aa18.57■□□□□ 0.56
COL9A3-214ENST00000490398 A0A087X0T9 212 aa18.56■□□□□ 0.56
COL9A3-214ENST00000490398 MED19A0JLT2 244 aaPredicted RBP18.56■□□□□ 0.56
COL9A3-214ENST00000490398 ILVBLA1L0T0 632 aa18.56■□□□□ 0.56
COL9A3-214ENST00000490398 MEI4A8MW99 385 aa18.56■□□□□ 0.56
COL9A3-214ENST00000490398 BNIP3LO60238 219 aa18.56■□□□□ 0.56
COL9A3-214ENST00000490398 ZNF821O75541 412 aaPredicted RBP18.56■□□□□ 0.56
COL9A3-214ENST00000490398 CD160O95971 181 aa18.56■□□□□ 0.56
COL9A3-214ENST00000490398 SERPING1P05155 500 aa18.56■□□□□ 0.56
COL9A3-214ENST00000490398 FAM228BP0C875 321 aa18.56■□□□□ 0.56
COL9A3-214ENST00000490398 RHOQP17081 205 aa18.56■□□□□ 0.56
COL9A3-214ENST00000490398 ENGP17813 658 aa18.56■□□□□ 0.56
COL9A3-214ENST00000490398 PSMA2P25787 234 aa18.56■□□□□ 0.56
COL9A3-214ENST00000490398 NNMTP40261 264 aa18.56■□□□□ 0.56
COL9A3-214ENST00000490398 GNA12Q03113 381 aa18.56■□□□□ 0.56
COL9A3-214ENST00000490398 POM121L1PQ3SYA9 428 aa18.56■□□□□ 0.56
COL9A3-214ENST00000490398 ACBD5Q5T8D3 534 aaPredicted RBP18.56■□□□□ 0.56
COL9A3-214ENST00000490398 LEKR1Q6ZMV7 388 aa18.56■□□□□ 0.56
COL9A3-214ENST00000490398 ZCCHC9Q8N567 271 aaKnown RBP18.56■□□□□ 0.56
COL9A3-214ENST00000490398 DCAF4L2Q8NA75 395 aa18.56■□□□□ 0.56
COL9A3-214ENST00000490398 ATP11CQ8NB49 1132 aa18.56■□□□□ 0.56
COL9A3-214ENST00000490398 CHST14Q8NCH0 376 aa18.56■□□□□ 0.56
COL9A3-214ENST00000490398 GANCQ8TET4 914 aa18.56■□□□□ 0.56
COL9A3-214ENST00000490398 FOXJ1Q92949 421 aa18.56■□□□□ 0.56
COL9A3-214ENST00000490398 TBC1D31Q96DN5 1066 aa18.56■□□□□ 0.56
COL9A3-214ENST00000490398 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.56■□□□□ 0.56
COL9A3-214ENST00000490398 BTBD1Q9H0C5 482 aa18.56■□□□□ 0.56
COL9A3-214ENST00000490398 TNKS2Q9H2K2 1166 aa18.56■□□□□ 0.56
COL9A3-214ENST00000490398 NOL6Q9H6R4 1146 aaKnown RBP18.56■□□□□ 0.56
COL9A3-214ENST00000490398 TMEM248Q9NWD8 314 aa18.56■□□□□ 0.56
COL9A3-214ENST00000490398 EIF2B4Q9UI10 523 aaKnown RBP18.56■□□□□ 0.56
COL9A3-214ENST00000490398 LUC7L2Q9Y383 392 aaKnown RBP18.56■□□□□ 0.56
COL9A3-214ENST00000490398 CEP192Q8TEP8 1941 aa18.55■□□□□ 0.56
COL9A3-214ENST00000490398 ANKRD62A6NC57 917 aa18.55■□□□□ 0.56
COL9A3-214ENST00000490398 CBX4O00257 560 aa18.55■□□□□ 0.56
COL9A3-214ENST00000490398 RNASEH2AO75792 299 aaKnown RBP18.55■□□□□ 0.56
COL9A3-214ENST00000490398 SEMA4FO95754 770 aa18.55■□□□□ 0.56
COL9A3-214ENST00000490398 IL1BP01584 269 aa18.55■□□□□ 0.56
COL9A3-214ENST00000490398 CTSLP07711 333 aa18.55■□□□□ 0.56
COL9A3-214ENST00000490398 DRD3P35462 400 aa18.55■□□□□ 0.56
COL9A3-214ENST00000490398 MAPK8P45983 427 aa18.55■□□□□ 0.56
COL9A3-214ENST00000490398 KRT83P78385 493 aa18.55■□□□□ 0.56
COL9A3-214ENST00000490398 SEMA3BQ13214 749 aa18.55■□□□□ 0.56
COL9A3-214ENST00000490398 ELAVL3Q14576 367 aaKnown RBP18.55■□□□□ 0.56
COL9A3-214ENST00000490398 DUOXA1Q1HG43 343 aa18.55■□□□□ 0.56
COL9A3-214ENST00000490398 CYP4V2Q6ZWL3 525 aaPredicted RBP18.55■□□□□ 0.56
COL9A3-214ENST00000490398 HDDC3Q8N4P3 179 aa18.55■□□□□ 0.56
COL9A3-214ENST00000490398 C1orf216Q8TAB5 229 aa18.55■□□□□ 0.56
COL9A3-214ENST00000490398 ARHGEF2Q92974 986 aaKnown RBP18.55■□□□□ 0.56
COL9A3-214ENST00000490398 ARHGEF26Q96DR7 871 aa18.55■□□□□ 0.56
COL9A3-214ENST00000490398 PPP1R9BQ96SB3 815 aa18.55■□□□□ 0.56
COL9A3-214ENST00000490398 ORAI3Q9BRQ5 295 aa18.55■□□□□ 0.56
COL9A3-214ENST00000490398 C2orf49Q9BVC5 232 aaPredicted RBP18.55■□□□□ 0.56
COL9A3-214ENST00000490398 ACE2Q9BYF1 805 aaPredicted RBP18.55■□□□□ 0.56
COL9A3-214ENST00000490398 MIR1-1HGQ9H1L0 117 aa18.55■□□□□ 0.56
COL9A3-214ENST00000490398 ATP13A1Q9HD20 1204 aa18.55■□□□□ 0.56
COL9A3-214ENST00000490398 PCSK1NQ9UHG2 260 aa18.55■□□□□ 0.56
COL9A3-214ENST00000490398 NENFQ9UMX5 172 aa18.55■□□□□ 0.56
COL9A3-214ENST00000490398 SLC6A14Q9UN76 642 aa18.55■□□□□ 0.56
COL9A3-214ENST00000490398 ZBTB32Q9Y2Y4 487 aaPredicted RBP18.55■□□□□ 0.56
COL9A3-214ENST00000490398 DOCK4Q8N1I0 1966 aa18.54■□□□□ 0.56
COL9A3-214ENST00000490398 FAM47DPA6NHR8 397 aa18.54■□□□□ 0.56
COL9A3-214ENST00000490398 CREB3O43889 395 aa18.54■□□□□ 0.56
COL9A3-214ENST00000490398 RNASEH1O60930 286 aaKnown RBP18.54■□□□□ 0.56
COL9A3-214ENST00000490398 IGHV4-34P06331 123 aa18.54■□□□□ 0.56
COL9A3-214ENST00000490398 SERPINF2P08697 491 aa18.54■□□□□ 0.56
COL9A3-214ENST00000490398 TCF4P15884 667 aa18.54■□□□□ 0.56
COL9A3-214ENST00000490398 L1CAMP32004 1257 aa18.54■□□□□ 0.56
COL9A3-214ENST00000490398 GALCP54803 685 aa18.54■□□□□ 0.56
COL9A3-214ENST00000490398 BNC1Q01954 994 aa18.54■□□□□ 0.56
COL9A3-214ENST00000490398 TTC31Q49AM3 519 aaPredicted RBP18.54■□□□□ 0.56
COL9A3-214ENST00000490398 EFHC2Q5JST6 749 aa18.54■□□□□ 0.56
COL9A3-214ENST00000490398 WDR45BQ5MNZ6 344 aa18.54■□□□□ 0.56
COL9A3-214ENST00000490398 PPP1R2P3Q6NXS1 205 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms