RNA–Protein interactions for RNA: ENST00000490391.1

PDLIM1-203, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 458 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-203ENST00000490391 SNX25Q9H3E2 840 aa7.4□□□□□ -1.22
PDLIM1-203ENST00000490391 FBXO44Q9H4M3 255 aa7.4□□□□□ -1.22
PDLIM1-203ENST00000490391 CSNK1G1Q9HCP0 422 aa7.4□□□□□ -1.22
PDLIM1-203ENST00000490391 ZNF71Q9NQZ8 489 aaPredicted RBP7.4□□□□□ -1.22
PDLIM1-203ENST00000490391 KRT82Q9NSB4 513 aa7.4□□□□□ -1.22
PDLIM1-203ENST00000490391 ABCB8Q9NUT2 735 aa7.4□□□□□ -1.22
PDLIM1-203ENST00000490391 SUN2Q9UH99 717 aa7.4□□□□□ -1.22
PDLIM1-203ENST00000490391 CYTH4Q9UIA0 394 aa7.4□□□□□ -1.22
PDLIM1-203ENST00000490391 GGA2Q9UJY4 613 aa7.4□□□□□ -1.22
PDLIM1-203ENST00000490391 SCML2Q9UQR0 700 aa7.4□□□□□ -1.22
PDLIM1-203ENST00000490391 DMTF1Q9Y222 760 aa7.4□□□□□ -1.22
PDLIM1-203ENST00000490391 ATP8B3O60423 1300 aa7.39□□□□□ -1.23
PDLIM1-203ENST00000490391 CPED1A4D0V7 1026 aa7.39□□□□□ -1.23
PDLIM1-203ENST00000490391 A8MXQ7 604 aa7.39□□□□□ -1.23
PDLIM1-203ENST00000490391 HHLA1C9JL84 531 aa7.39□□□□□ -1.23
PDLIM1-203ENST00000490391 NTN3O00634 580 aaPredicted RBP7.39□□□□□ -1.23
PDLIM1-203ENST00000490391 AP1G2O75843 785 aa7.39□□□□□ -1.23
PDLIM1-203ENST00000490391 CYBBP04839 570 aa7.39□□□□□ -1.23
PDLIM1-203ENST00000490391 PRKCGP05129 697 aa7.39□□□□□ -1.23
PDLIM1-203ENST00000490391 PABPC1P11940 636 aaKnown RBP7.39□□□□□ -1.23
PDLIM1-203ENST00000490391 HGFP14210 728 aa7.39□□□□□ -1.23
PDLIM1-203ENST00000490391 GOT1P17174 413 aa7.39□□□□□ -1.23
PDLIM1-203ENST00000490391 MAT2AP31153 395 aaKnown RBP7.39□□□□□ -1.23
PDLIM1-203ENST00000490391 SLC8A1P32418 973 aa7.39□□□□□ -1.23
PDLIM1-203ENST00000490391 NUDT1P36639 197 aa7.39□□□□□ -1.23
PDLIM1-203ENST00000490391 PRPHP41219 470 aa7.39□□□□□ -1.23
PDLIM1-203ENST00000490391 TOB1P50616 345 aaPredicted RBP7.39□□□□□ -1.23
PDLIM1-203ENST00000490391 METAP1P53582 386 aa7.39□□□□□ -1.23
PDLIM1-203ENST00000490391 MLLT10P55197 1068 aa7.39□□□□□ -1.23
PDLIM1-203ENST00000490391 GUCY1B3Q02153 619 aa7.39□□□□□ -1.23
PDLIM1-203ENST00000490391 SFSWAPQ12872 951 aaKnown RBP7.39□□□□□ -1.23
PDLIM1-203ENST00000490391 EIF3IQ13347 325 aaKnown RBP7.39□□□□□ -1.23
PDLIM1-203ENST00000490391 STAT4Q14765 748 aa7.39□□□□□ -1.23
PDLIM1-203ENST00000490391 ZCCHC8Q6NZY4 707 aaKnown RBP7.39□□□□□ -1.23
PDLIM1-203ENST00000490391 SND1Q7KZF4 910 aaKnown RBP eCLIP7.39□□□□□ -1.23
PDLIM1-203ENST00000490391 RAB11FIP2Q7L804 512 aa7.39□□□□□ -1.23
PDLIM1-203ENST00000490391 SCD5Q86SK9 330 aa7.39□□□□□ -1.23
PDLIM1-203ENST00000490391 PRPF39Q86UA1 669 aaKnown RBP7.39□□□□□ -1.23
PDLIM1-203ENST00000490391 TRIM69Q86WT6 500 aa7.39□□□□□ -1.23
PDLIM1-203ENST00000490391 SKAP1Q86WV1 359 aa7.39□□□□□ -1.23
PDLIM1-203ENST00000490391 ZFAND4Q86XD8 727 aa7.39□□□□□ -1.23
PDLIM1-203ENST00000490391 JAMLQ86YT9 394 aa7.39□□□□□ -1.23
PDLIM1-203ENST00000490391 DENND1CQ8IV53 801 aa7.39□□□□□ -1.23
PDLIM1-203ENST00000490391 AHI1Q8N157 1196 aa7.39□□□□□ -1.23
PDLIM1-203ENST00000490391 SLC22A18ASQ8N1D0 253 aa7.39□□□□□ -1.23
PDLIM1-203ENST00000490391 FBXO39Q8N4B4 442 aa7.39□□□□□ -1.23
PDLIM1-203ENST00000490391 NECAB1Q8N987 351 aa7.39□□□□□ -1.23
PDLIM1-203ENST00000490391 ZNF548Q8NEK5 533 aaPredicted RBP7.39□□□□□ -1.23
PDLIM1-203ENST00000490391 C9orf43Q8TAL5 461 aaPredicted RBP7.39□□□□□ -1.23
PDLIM1-203ENST00000490391 WFDC5Q8TCV5 224 aa7.39□□□□□ -1.23
PDLIM1-203ENST00000490391 GTF3C6Q969F1 213 aa7.39□□□□□ -1.23
PDLIM1-203ENST00000490391 KLHDC7BQ96G42 594 aa7.39□□□□□ -1.23
PDLIM1-203ENST00000490391 POM121Q96HA1 1249 aa7.39□□□□□ -1.23
PDLIM1-203ENST00000490391 LMLNQ96KR4 655 aa7.39□□□□□ -1.23
PDLIM1-203ENST00000490391 MRGPRX3Q96LB0 322 aa7.39□□□□□ -1.23
PDLIM1-203ENST00000490391 FAM129BQ96TA1 746 aa7.39□□□□□ -1.23
PDLIM1-203ENST00000490391 DUSP23Q9BVJ7 150 aa7.39□□□□□ -1.23
PDLIM1-203ENST00000490391 DCLK3Q9C098 648 aa7.39□□□□□ -1.23
PDLIM1-203ENST00000490391 PDRG1Q9NUG6 133 aa7.39□□□□□ -1.23
PDLIM1-203ENST00000490391 POLEQ07864 2286 aa7.39□□□□□ -1.23
PDLIM1-203ENST00000490391 STAB1Q9NY15 2570 aa7.38□□□□□ -1.23
PDLIM1-203ENST00000490391 DIDO1Q9BTC0 2240 aaKnown RBP7.38□□□□□ -1.23
PDLIM1-203ENST00000490391 UBE4BO95155 1302 aa7.38□□□□□ -1.23
PDLIM1-203ENST00000490391 TBC1D3DA0A087WVF3 549 aa7.38□□□□□ -1.23
PDLIM1-203ENST00000490391 TBC1D3IA0A087WXS9 549 aa7.38□□□□□ -1.23
PDLIM1-203ENST00000490391 TBC1D3EA0A087X179 549 aa7.38□□□□□ -1.23
PDLIM1-203ENST00000490391 TBC1D3KA0A087X1G2 549 aa7.38□□□□□ -1.23
PDLIM1-203ENST00000490391 SLC12A8A0AV02 714 aa7.38□□□□□ -1.23
PDLIM1-203ENST00000490391 GOLGA8IPA6NC78 632 aa7.38□□□□□ -1.23
PDLIM1-203ENST00000490391 TBC1D3FA6NER0 549 aaPredicted RBP7.38□□□□□ -1.23
PDLIM1-203ENST00000490391 NEMP2A6NFY4 417 aa7.38□□□□□ -1.23
PDLIM1-203ENST00000490391 GOLGA8JA6NMD2 632 aa7.38□□□□□ -1.23
PDLIM1-203ENST00000490391 TBC1D3LB9A6J9 549 aa7.38□□□□□ -1.23
PDLIM1-203ENST00000490391 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.38□□□□□ -1.23
PDLIM1-203ENST00000490391 PRAMEF26H0Y7S4 382 aa7.38□□□□□ -1.23
PDLIM1-203ENST00000490391 FAM229AH3BQW9 127 aa7.38□□□□□ -1.23
PDLIM1-203ENST00000490391 PLRG1O43660 514 aaKnown RBP7.38□□□□□ -1.23
PDLIM1-203ENST00000490391 RNASEH1O60930 286 aaKnown RBP7.38□□□□□ -1.23
PDLIM1-203ENST00000490391 CST3P01034 146 aaPredicted RBP7.38□□□□□ -1.23
PDLIM1-203ENST00000490391 ATP5BP06576 529 aaKnown RBP7.38□□□□□ -1.23
PDLIM1-203ENST00000490391 KRT7P08729 469 aa7.38□□□□□ -1.23
PDLIM1-203ENST00000490391 TBC1D3HP0C7X1 549 aa7.38□□□□□ -1.23
PDLIM1-203ENST00000490391 GNLYP22749 145 aa7.38□□□□□ -1.23
PDLIM1-203ENST00000490391 CD70P32970 193 aa7.38□□□□□ -1.23
PDLIM1-203ENST00000490391 DDIT3P35638 169 aa7.38□□□□□ -1.23
PDLIM1-203ENST00000490391 PSMD8P48556 350 aa7.38□□□□□ -1.23
PDLIM1-203ENST00000490391 COG7P83436 770 aa7.38□□□□□ -1.23
PDLIM1-203ENST00000490391 GNL2Q13823 731 aaKnown RBP7.38□□□□□ -1.23
PDLIM1-203ENST00000490391 POM121L1PQ3SYA9 428 aa7.38□□□□□ -1.23
PDLIM1-203ENST00000490391 MPPE1Q53F39 396 aa7.38□□□□□ -1.23
PDLIM1-203ENST00000490391 ZNF468Q5VIY5 522 aaPredicted RBP7.38□□□□□ -1.23
PDLIM1-203ENST00000490391 TBC1D3GQ6DHY5 549 aa7.38□□□□□ -1.23
PDLIM1-203ENST00000490391 TBC1D3CQ6IPX1 549 aa7.38□□□□□ -1.23
PDLIM1-203ENST00000490391 ZNF720Q7Z2F6 126 aa7.38□□□□□ -1.23
PDLIM1-203ENST00000490391 TRAPPC11Q7Z392 1133 aa7.38□□□□□ -1.23
PDLIM1-203ENST00000490391 NLRP8Q86W28 1048 aa7.38□□□□□ -1.23
PDLIM1-203ENST00000490391 TBC1D3Q8IZP1 549 aaPredicted RBP7.38□□□□□ -1.23
PDLIM1-203ENST00000490391 OR13H1Q8NG92 308 aa7.38□□□□□ -1.23
PDLIM1-203ENST00000490391 HVCN1Q96D96 273 aa7.38□□□□□ -1.23
PDLIM1-203ENST00000490391 IFT43Q96FT9 208 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 247.3 ms