RNA–Protein interactions for RNA: ENST00000490258.1

CRNKL1-203, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 2

Gene CRNKL1, Length 733 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-203ENST00000490258 RIPK3Q9Y572 518 aa3.6□□□□□ -1.83
CRNKL1-203ENST00000490258 USH1CQ9Y6N9 552 aa3.6□□□□□ -1.83
CRNKL1-203ENST00000490258 COMMD3-BMI1R4GMX3 469 aa3.6□□□□□ -1.83
CRNKL1-203ENST00000490258 ASTN1O14525 1302 aa3.6□□□□□ -1.83
CRNKL1-203ENST00000490258 NFASCO94856 1347 aa3.6□□□□□ -1.83
CRNKL1-203ENST00000490258 MYO3BQ8WXR4 1341 aa3.6□□□□□ -1.83
CRNKL1-203ENST00000490258 PASKQ96RG2 1323 aa3.6□□□□□ -1.83
CRNKL1-203ENST00000490258 IGSF9BQ9UPX0 1349 aa3.6□□□□□ -1.83
CRNKL1-203ENST00000490258 RALGAPA2Q2PPJ7 1873 aa3.59□□□□□ -1.83
CRNKL1-203ENST00000490258 FAM47DPA6NHR8 397 aa3.59□□□□□ -1.83
CRNKL1-203ENST00000490258 A8MXQ7 604 aa3.59□□□□□ -1.83
CRNKL1-203ENST00000490258 ANKRD63C9JTQ0 380 aa3.59□□□□□ -1.83
CRNKL1-203ENST00000490258 KLRF2D3W0D1 207 aa3.59□□□□□ -1.83
CRNKL1-203ENST00000490258 IFRD1O00458 451 aaPredicted RBP3.59□□□□□ -1.83
CRNKL1-203ENST00000490258 PDXKO00764 312 aa3.59□□□□□ -1.83
CRNKL1-203ENST00000490258 CETN3O15182 167 aa3.59□□□□□ -1.83
CRNKL1-203ENST00000490258 LAMTOR5O43504 91 aa3.59□□□□□ -1.83
CRNKL1-203ENST00000490258 TSPAN6O43657 245 aa3.59□□□□□ -1.83
CRNKL1-203ENST00000490258 AP1G1O43747 822 aa3.59□□□□□ -1.83
CRNKL1-203ENST00000490258 STRNO43815 780 aa3.59□□□□□ -1.83
CRNKL1-203ENST00000490258 EDF1O60869 148 aaKnown RBP3.59□□□□□ -1.83
CRNKL1-203ENST00000490258 ZBED4O75132 1171 aa3.59□□□□□ -1.83
CRNKL1-203ENST00000490258 CDH16O75309 829 aa3.59□□□□□ -1.83
CRNKL1-203ENST00000490258 ENTPD3O75355 529 aa3.59□□□□□ -1.83
CRNKL1-203ENST00000490258 CSDE1O75534 798 aaKnown RBP3.59□□□□□ -1.83
CRNKL1-203ENST00000490258 CNMDO75829 334 aa3.59□□□□□ -1.83
CRNKL1-203ENST00000490258 ZWINTO95229 277 aa3.59□□□□□ -1.83
CRNKL1-203ENST00000490258 ENO2P09104 434 aaPredicted RBP3.59□□□□□ -1.83
CRNKL1-203ENST00000490258 FAM163BP0C2L3 166 aa3.59□□□□□ -1.83
CRNKL1-203ENST00000490258 PABPC4LP0CB38 370 aaKnown RBP3.59□□□□□ -1.83
CRNKL1-203ENST00000490258 ZNF888P0CJ79 500 aaPredicted RBP3.59□□□□□ -1.83
CRNKL1-203ENST00000490258 SETSIPP0DME0 302 aa3.59□□□□□ -1.83
CRNKL1-203ENST00000490258 IVDP26440 423 aa3.59□□□□□ -1.83
CRNKL1-203ENST00000490258 MARK3P27448 753 aa3.59□□□□□ -1.83
CRNKL1-203ENST00000490258 PTPN4P29074 926 aa3.59□□□□□ -1.83
CRNKL1-203ENST00000490258 CTGFP29279 349 aa3.59□□□□□ -1.83
CRNKL1-203ENST00000490258 SDHAP31040 664 aa3.59□□□□□ -1.83
CRNKL1-203ENST00000490258 MAN1A1P33908 653 aa3.59□□□□□ -1.83
CRNKL1-203ENST00000490258 GJA4P35212 333 aa3.59□□□□□ -1.83
CRNKL1-203ENST00000490258 SOX5P35711 763 aa3.59□□□□□ -1.83
CRNKL1-203ENST00000490258 COILP38432 576 aaPredicted RBP3.59□□□□□ -1.83
CRNKL1-203ENST00000490258 STAT1P42224 750 aa3.59□□□□□ -1.83
CRNKL1-203ENST00000490258 IFNAR2P48551 515 aa3.59□□□□□ -1.83
CRNKL1-203ENST00000490258 RASSF2P50749 326 aa3.59□□□□□ -1.83
CRNKL1-203ENST00000490258 DNA2P51530 1060 aa3.59□□□□□ -1.83
CRNKL1-203ENST00000490258 RAP1GDS1P52306 607 aa3.59□□□□□ -1.83
CRNKL1-203ENST00000490258 EPHB1P54762 984 aa3.59□□□□□ -1.83
CRNKL1-203ENST00000490258 GALCP54803 685 aa3.59□□□□□ -1.83
CRNKL1-203ENST00000490258 NAPAP54920 295 aa3.59□□□□□ -1.83
CRNKL1-203ENST00000490258 PLTPP55058 493 aa3.59□□□□□ -1.83
CRNKL1-203ENST00000490258 RNASELQ05823 741 aaKnown RBP3.59□□□□□ -1.83
CRNKL1-203ENST00000490258 SLC34A1Q06495 639 aa3.59□□□□□ -1.83
CRNKL1-203ENST00000490258 SULT2A1Q06520 285 aa3.59□□□□□ -1.83
CRNKL1-203ENST00000490258 ZNF543Q08ER8 600 aa3.59□□□□□ -1.83
CRNKL1-203ENST00000490258 ABHD18Q0P651 414 aa3.59□□□□□ -1.83
CRNKL1-203ENST00000490258 AP1B1Q10567 949 aa3.59□□□□□ -1.83
CRNKL1-203ENST00000490258 MTA1Q13330 715 aa3.59□□□□□ -1.83
CRNKL1-203ENST00000490258 PTK6Q13882 451 aa3.59□□□□□ -1.83
CRNKL1-203ENST00000490258 STAT4Q14765 748 aa3.59□□□□□ -1.83
CRNKL1-203ENST00000490258 MYBPC3Q14896 1274 aa3.59□□□□□ -1.83
CRNKL1-203ENST00000490258 KRT72Q14CN4 511 aa3.59□□□□□ -1.83
CRNKL1-203ENST00000490258 NFE2Q16621 373 aaPredicted RBP3.59□□□□□ -1.83
CRNKL1-203ENST00000490258 TBR1Q16650 682 aa3.59□□□□□ -1.83
CRNKL1-203ENST00000490258 PDK4Q16654 411 aa3.59□□□□□ -1.83
CRNKL1-203ENST00000490258 EXOC3L4Q17RC7 722 aa3.59□□□□□ -1.83
CRNKL1-203ENST00000490258 KNOP1Q1ED39 458 aaKnown RBP3.59□□□□□ -1.83
CRNKL1-203ENST00000490258 TMEM266Q2M3C6 531 aa3.59□□□□□ -1.83
CRNKL1-203ENST00000490258 CATSPEREQ5SY80 951 aa3.59□□□□□ -1.83
CRNKL1-203ENST00000490258 SYDE2Q5VT97 1194 aa3.59□□□□□ -1.83
CRNKL1-203ENST00000490258 WDR78Q5VTH9 848 aa3.59□□□□□ -1.83
CRNKL1-203ENST00000490258 SNX30Q5VWJ9 437 aa3.59□□□□□ -1.83
CRNKL1-203ENST00000490258 CST9Q5W186 159 aa3.59□□□□□ -1.83
CRNKL1-203ENST00000490258 KRT79Q5XKE5 535 aa3.59□□□□□ -1.83
CRNKL1-203ENST00000490258 BTBD8Q5XKL5 378 aa3.59□□□□□ -1.83
CRNKL1-203ENST00000490258 TATDN1Q6P1N9 297 aa3.59□□□□□ -1.83
CRNKL1-203ENST00000490258 ZNF585AQ6P3V2 769 aa3.59□□□□□ -1.83
CRNKL1-203ENST00000490258 TMEM154Q6P9G4 183 aa3.59□□□□□ -1.83
CRNKL1-203ENST00000490258 TRMT10BQ6PF06 316 aaKnown RBP3.59□□□□□ -1.83
CRNKL1-203ENST00000490258 ARHGEF18Q6ZSZ5 1173 aa3.59□□□□□ -1.83
CRNKL1-203ENST00000490258 INTS8Q75QN2 995 aaKnown RBP3.59□□□□□ -1.83
CRNKL1-203ENST00000490258 RTN4RL1Q86UN2 441 aaPredicted RBP3.59□□□□□ -1.83
CRNKL1-203ENST00000490258 TRIM74Q86UV6 250 aa3.59□□□□□ -1.83
CRNKL1-203ENST00000490258 TRIM73Q86UV7 250 aa3.59□□□□□ -1.83
CRNKL1-203ENST00000490258 APOBEC3FQ8IUX4 373 aaKnown RBP3.59□□□□□ -1.83
CRNKL1-203ENST00000490258 CCDC65Q8IXS2 484 aa3.59□□□□□ -1.83
CRNKL1-203ENST00000490258 RAVER1Q8IY67 606 aaKnown RBP3.59□□□□□ -1.83
CRNKL1-203ENST00000490258 SCYL3Q8IZE3 742 aa3.59□□□□□ -1.83
CRNKL1-203ENST00000490258 LRRC43Q8N309 656 aa3.59□□□□□ -1.83
CRNKL1-203ENST00000490258 CISD2Q8N5K1 135 aaKnown RBP3.59□□□□□ -1.83
CRNKL1-203ENST00000490258 AMER2Q8N7J2 671 aa3.59□□□□□ -1.83
CRNKL1-203ENST00000490258 SMC1BQ8NDV3 1235 aa3.59□□□□□ -1.83
CRNKL1-203ENST00000490258 ZSWIM2Q8NEG5 633 aa3.59□□□□□ -1.83
CRNKL1-203ENST00000490258 SLC35G2Q8TBE7 412 aa3.59□□□□□ -1.83
CRNKL1-203ENST00000490258 LRRC8CQ8TDW0 803 aa3.59□□□□□ -1.83
CRNKL1-203ENST00000490258 TBCKQ8TEA7 893 aa3.59□□□□□ -1.83
CRNKL1-203ENST00000490258 TMEM174Q8WUU8 243 aa3.59□□□□□ -1.83
CRNKL1-203ENST00000490258 NRG4Q8WWG1 115 aa3.59□□□□□ -1.83
CRNKL1-203ENST00000490258 ASB15Q8WXK1 588 aa3.59□□□□□ -1.83
CRNKL1-203ENST00000490258 MAML1Q92585 1016 aa3.59□□□□□ -1.83
CRNKL1-203ENST00000490258 DCPSQ96C86 337 aaKnown RBP3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms