RNA–Protein interactions for RNA: ENST00000490062.1

ERCC3-207, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 4

Gene ERCC3, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-207ENST00000490062 CAMK2GQ13555 558 aaPredicted RBP17.85■□□□□ 0.45
ERCC3-207ENST00000490062 PAFAH1B3Q15102 231 aaKnown RBP17.85■□□□□ 0.45
ERCC3-207ENST00000490062 ANKRD20A8PQ5CZ79 823 aa17.85■□□□□ 0.45
ERCC3-207ENST00000490062 RETSATQ6NUM9 610 aa17.85■□□□□ 0.45
ERCC3-207ENST00000490062 TMCO3Q6UWJ1 677 aa17.85■□□□□ 0.45
ERCC3-207ENST00000490062 RASSF3Q86WH2 238 aa17.85■□□□□ 0.45
ERCC3-207ENST00000490062 LRRC49Q8IUZ0 686 aa17.85■□□□□ 0.45
ERCC3-207ENST00000490062 NPWQ8N729 165 aa17.85■□□□□ 0.45
ERCC3-207ENST00000490062 EXD1Q8NHP7 514 aa17.85■□□□□ 0.45
ERCC3-207ENST00000490062 PCDH19Q8TAB3 1148 aa17.85■□□□□ 0.45
ERCC3-207ENST00000490062 CYB5D2Q8WUJ1 264 aa17.85■□□□□ 0.45
ERCC3-207ENST00000490062 RNF157Q96PX1 679 aa17.85■□□□□ 0.45
ERCC3-207ENST00000490062 ATP13A1Q9HD20 1204 aa17.85■□□□□ 0.45
ERCC3-207ENST00000490062 C2orf42Q9NWW7 574 aa17.85■□□□□ 0.45
ERCC3-207ENST00000490062 CACNA2D2Q9NY47 1150 aa17.85■□□□□ 0.45
ERCC3-207ENST00000490062 EBF1Q9UH73 591 aa17.85■□□□□ 0.45
ERCC3-207ENST00000490062 SUN2Q9UH99 717 aa17.85■□□□□ 0.45
ERCC3-207ENST00000490062 LRRD1A4D1F6 860 aa17.84■□□□□ 0.45
ERCC3-207ENST00000490062 RASA4BC9J798 803 aa17.84■□□□□ 0.45
ERCC3-207ENST00000490062 RASA4O43374 803 aa17.84■□□□□ 0.45
ERCC3-207ENST00000490062 HOXB2P14652 356 aa17.84■□□□□ 0.45
ERCC3-207ENST00000490062 AMPD1P23109 780 aa17.84■□□□□ 0.45
ERCC3-207ENST00000490062 ACVRL1P37023 503 aa17.84■□□□□ 0.45
ERCC3-207ENST00000490062 NNMTP40261 264 aa17.84■□□□□ 0.45
ERCC3-207ENST00000490062 CTSOP43234 321 aaPredicted RBP17.84■□□□□ 0.45
ERCC3-207ENST00000490062 COPS2P61201 443 aa17.84■□□□□ 0.45
ERCC3-207ENST00000490062 ST8SIA6P61647 398 aa17.84■□□□□ 0.45
ERCC3-207ENST00000490062 ARF5P84085 180 aa17.84■□□□□ 0.45
ERCC3-207ENST00000490062 HNRNPA1L2Q32P51 320 aaKnown RBP17.84■□□□□ 0.45
ERCC3-207ENST00000490062 SLC9A4Q6AI14 798 aa17.84■□□□□ 0.45
ERCC3-207ENST00000490062 SERPINA13PQ6UXR4 307 aa17.84■□□□□ 0.45
ERCC3-207ENST00000490062 TMEM92Q6UXU6 159 aa17.84■□□□□ 0.45
ERCC3-207ENST00000490062 METTL3Q86U44 580 aaKnown RBP17.84■□□□□ 0.45
ERCC3-207ENST00000490062 SH2D3CQ8N5H7 860 aa17.84■□□□□ 0.45
ERCC3-207ENST00000490062 CCDC33Q8N5R6 958 aa17.84■□□□□ 0.45
ERCC3-207ENST00000490062 PQLC3Q8N755 202 aa17.84■□□□□ 0.45
ERCC3-207ENST00000490062 FRS2Q8WU20 508 aa17.84■□□□□ 0.45
ERCC3-207ENST00000490062 CASKIN2Q8WXE0 1202 aa17.84■□□□□ 0.45
ERCC3-207ENST00000490062 KRT35Q92764 455 aa17.84■□□□□ 0.45
ERCC3-207ENST00000490062 CALN1Q9BXU9 219 aa17.84■□□□□ 0.45
ERCC3-207ENST00000490062 ETNK2Q9NVF9 386 aa17.84■□□□□ 0.45
ERCC3-207ENST00000490062 SLC25A13Q9UJS0 675 aa17.84■□□□□ 0.45
ERCC3-207ENST00000490062 AMFRQ9UKV5 643 aa17.84■□□□□ 0.45
ERCC3-207ENST00000490062 GUCA1BQ9UMX6 200 aa17.84■□□□□ 0.45
ERCC3-207ENST00000490062 SLC8A2Q9UPR5 921 aa17.84■□□□□ 0.45
ERCC3-207ENST00000490062 EFR3BQ9Y2G0 817 aa17.84■□□□□ 0.45
ERCC3-207ENST00000490062 CACNA1HO95180 2353 aa17.83■□□□□ 0.45
ERCC3-207ENST00000490062 TARSL2A2RTX5 802 aaKnown RBP17.83■□□□□ 0.44
ERCC3-207ENST00000490062 ARHGAP42A6NI28 874 aa17.83■□□□□ 0.44
ERCC3-207ENST00000490062 ZSCAN12O43309 604 aa17.83■□□□□ 0.44
ERCC3-207ENST00000490062 SNAP91O60641 907 aa17.83■□□□□ 0.44
ERCC3-207ENST00000490062 ZRANB2O95218 330 aaKnown RBP eCLIP17.83■□□□□ 0.44
ERCC3-207ENST00000490062 CD160O95971 181 aa17.83■□□□□ 0.44
ERCC3-207ENST00000490062 KRT1P04264 644 aa17.83■□□□□ 0.44
ERCC3-207ENST00000490062 PRKCHP24723 683 aa17.83■□□□□ 0.44
ERCC3-207ENST00000490062 PTPN7P35236 360 aa17.83■□□□□ 0.44
ERCC3-207ENST00000490062 GJC1P36383 396 aa17.83■□□□□ 0.44
ERCC3-207ENST00000490062 CDKN2BP42772 138 aa17.83■□□□□ 0.44
ERCC3-207ENST00000490062 MMRN1Q13201 1228 aa17.83■□□□□ 0.44
ERCC3-207ENST00000490062 PPP2R5EQ16537 467 aa17.83■□□□□ 0.44
ERCC3-207ENST00000490062 FNDC3BQ53EP0 1204 aaKnown RBP17.83■□□□□ 0.44
ERCC3-207ENST00000490062 INO80DQ53TQ3 878 aaPredicted RBP17.83■□□□□ 0.44
ERCC3-207ENST00000490062 NCBP2-AS2Q69YL0 99 aa17.83■□□□□ 0.44
ERCC3-207ENST00000490062 PEX26Q7Z412 305 aa17.83■□□□□ 0.44
ERCC3-207ENST00000490062 PLPP6Q8IY26 295 aa17.83■□□□□ 0.44
ERCC3-207ENST00000490062 RCOR2Q8IZ40 523 aa17.83■□□□□ 0.44
ERCC3-207ENST00000490062 ISG20Q96AZ6 181 aaKnown RBP17.83■□□□□ 0.44
ERCC3-207ENST00000490062 HMCESQ96FZ2 354 aa17.83■□□□□ 0.44
ERCC3-207ENST00000490062 HES6Q96HZ4 224 aa17.83■□□□□ 0.44
ERCC3-207ENST00000490062 RBM41Q96IZ5 413 aaKnown RBP17.83■□□□□ 0.44
ERCC3-207ENST00000490062 CEP44Q9C0F1 390 aa17.83■□□□□ 0.44
ERCC3-207ENST00000490062 SLC39A8Q9C0K1 460 aa17.83■□□□□ 0.44
ERCC3-207ENST00000490062 PDFQ9HBH1 243 aa17.83■□□□□ 0.44
ERCC3-207ENST00000490062 POLMQ9NP87 494 aaPredicted RBP17.83■□□□□ 0.44
ERCC3-207ENST00000490062 SLCO3A1Q9UIG8 710 aa17.83■□□□□ 0.44
ERCC3-207ENST00000490062 HPCAL4Q9UM19 191 aa17.83■□□□□ 0.44
ERCC3-207ENST00000490062 RAD54BQ9Y620 910 aa17.83■□□□□ 0.44
ERCC3-207ENST00000490062 WASH3PC4AMC7 463 aa17.82■□□□□ 0.44
ERCC3-207ENST00000490062 APBB3O95704 486 aa17.82■□□□□ 0.44
ERCC3-207ENST00000490062 SRCP12931 536 aa17.82■□□□□ 0.44
ERCC3-207ENST00000490062 ZFXP17010 805 aaPredicted RBP17.82■□□□□ 0.44
ERCC3-207ENST00000490062 COL9A1P20849 921 aa17.82■□□□□ 0.44
ERCC3-207ENST00000490062 MARCKSL1P49006 195 aa17.82■□□□□ 0.44
ERCC3-207ENST00000490062 SERPINH1P50454 418 aaKnown RBP17.82■□□□□ 0.44
ERCC3-207ENST00000490062 STARD3Q14849 445 aa17.82■□□□□ 0.44
ERCC3-207ENST00000490062 ANGPT1Q15389 498 aa17.82■□□□□ 0.44
ERCC3-207ENST00000490062 IL31Q6EBC2 164 aa17.82■□□□□ 0.44
ERCC3-207ENST00000490062 MFSD7Q6UXD7 560 aa17.82■□□□□ 0.44
ERCC3-207ENST00000490062 REXO1L1PQ8IX06 675 aa17.82■□□□□ 0.44
ERCC3-207ENST00000490062 TRIM58Q8NG06 486 aa17.82■□□□□ 0.44
ERCC3-207ENST00000490062 FATE1Q969F0 183 aa17.82■□□□□ 0.44
ERCC3-207ENST00000490062 ZNF830Q96NB3 372 aaPredicted RBP17.82■□□□□ 0.44
ERCC3-207ENST00000490062 SPON2Q9BUD6 331 aa17.82■□□□□ 0.44
ERCC3-207ENST00000490062 ZDHHC4Q9NPG8 344 aa17.82■□□□□ 0.44
ERCC3-207ENST00000490062 KLHL11Q9NVR0 708 aa17.82■□□□□ 0.44
ERCC3-207ENST00000490062 FANCMQ8IYD8 2048 aa17.81■□□□□ 0.44
ERCC3-207ENST00000490062 EDDM13A0A1B0GTR0 161 aa17.81■□□□□ 0.44
ERCC3-207ENST00000490062 CBX4O00257 560 aa17.81■□□□□ 0.44
ERCC3-207ENST00000490062 PRAMEF11O60813 436 aa17.81■□□□□ 0.44
ERCC3-207ENST00000490062 GLDCP23378 1020 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms