RNA–Protein interactions for RNA: ENST00000489898.1

SRSF4-204, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 3

Gene SRSF4, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-204ENST00000489898 A0A1W2PPC4 97 aa12.14□□□□□ -0.47
SRSF4-204ENST00000489898 E9PAM4 449 aa12.14□□□□□ -0.47
SRSF4-204ENST00000489898 HYAL3O43820 417 aaPredicted RBP12.14□□□□□ -0.47
SRSF4-204ENST00000489898 OPHN1O60890 802 aa12.14□□□□□ -0.47
SRSF4-204ENST00000489898 SLC2A3P11169 496 aa12.14□□□□□ -0.47
SRSF4-204ENST00000489898 CD27P26842 260 aa12.14□□□□□ -0.47
SRSF4-204ENST00000489898 KRT9P35527 623 aa12.14□□□□□ -0.47
SRSF4-204ENST00000489898 CSNK1EP49674 416 aaKnown RBP12.14□□□□□ -0.47
SRSF4-204ENST00000489898 CDH4P55283 916 aa12.14□□□□□ -0.47
SRSF4-204ENST00000489898 NRG1Q02297 640 aaPredicted RBP12.14□□□□□ -0.47
SRSF4-204ENST00000489898 FOXC1Q12948 553 aa12.14□□□□□ -0.47
SRSF4-204ENST00000489898 SLC14A1Q13336 389 aa12.14□□□□□ -0.47
SRSF4-204ENST00000489898 TPD52L1Q16890 204 aaPredicted RBP12.14□□□□□ -0.47
SRSF4-204ENST00000489898 HLA-BQ31612 363 aa12.14□□□□□ -0.47
SRSF4-204ENST00000489898 CCDC14Q49A88 953 aa12.14□□□□□ -0.47
SRSF4-204ENST00000489898 RABGAP1LQ5R372 815 aa12.14□□□□□ -0.47
SRSF4-204ENST00000489898 KIAA0895LQ68EN5 471 aa12.14□□□□□ -0.47
SRSF4-204ENST00000489898 CYP4V2Q6ZWL3 525 aaPredicted RBP12.14□□□□□ -0.47
SRSF4-204ENST00000489898 FAM131BQ86XD5 332 aa12.14□□□□□ -0.47
SRSF4-204ENST00000489898 ZNF677Q86XU0 584 aa12.14□□□□□ -0.47
SRSF4-204ENST00000489898 RGL4Q8IZJ4 473 aa12.14□□□□□ -0.47
SRSF4-204ENST00000489898 CCDC185Q8N715 623 aa12.14□□□□□ -0.47
SRSF4-204ENST00000489898 DCAF4L2Q8NA75 395 aa12.14□□□□□ -0.47
SRSF4-204ENST00000489898 OR2A12Q8NGT7 310 aa12.14□□□□□ -0.47
SRSF4-204ENST00000489898 SLC30A5Q8TAD4 765 aa12.14□□□□□ -0.47
SRSF4-204ENST00000489898 NOX5Q96PH1 765 aa12.14□□□□□ -0.47
SRSF4-204ENST00000489898 C11orf70Q9BRQ4 267 aa12.14□□□□□ -0.47
SRSF4-204ENST00000489898 ZDHHC5Q9C0B5 715 aa12.14□□□□□ -0.47
SRSF4-204ENST00000489898 BTBD1Q9H0C5 482 aa12.14□□□□□ -0.47
SRSF4-204ENST00000489898 NOL6Q9H6R4 1146 aaKnown RBP12.14□□□□□ -0.47
SRSF4-204ENST00000489898 SGK2Q9HBY8 427 aa12.14□□□□□ -0.47
SRSF4-204ENST00000489898 NLRC4Q9NPP4 1024 aa12.14□□□□□ -0.47
SRSF4-204ENST00000489898 FBXL12Q9NXK8 326 aa12.14□□□□□ -0.47
SRSF4-204ENST00000489898 RRN3Q9NYV6 651 aa12.14□□□□□ -0.47
SRSF4-204ENST00000489898 PPM1HQ9ULR3 514 aa12.14□□□□□ -0.47
SRSF4-204ENST00000489898 SCML1Q9UN30 329 aa12.14□□□□□ -0.47
SRSF4-204ENST00000489898 SCN8AQ9UQD0 1980 aa12.14□□□□□ -0.47
SRSF4-204ENST00000489898 CFAP46Q8IYW2 2715 aa12.13□□□□□ -0.47
SRSF4-204ENST00000489898 TYW5A2RUC4 315 aaKnown RBP12.13□□□□□ -0.47
SRSF4-204ENST00000489898 H0Y8X5 98 aa12.13□□□□□ -0.47
SRSF4-204ENST00000489898 GOLGA8SH3BPF8 625 aa12.13□□□□□ -0.47
SRSF4-204ENST00000489898 TEX33O43247 280 aa12.13□□□□□ -0.47
SRSF4-204ENST00000489898 PLRG1O43660 514 aaKnown RBP12.13□□□□□ -0.47
SRSF4-204ENST00000489898 CLDN11O75508 207 aa12.13□□□□□ -0.47
SRSF4-204ENST00000489898 DNTTP04053 509 aa12.13□□□□□ -0.47
SRSF4-204ENST00000489898 ACADMP11310 421 aa12.13□□□□□ -0.47
SRSF4-204ENST00000489898 ABCB4P21439 1286 aa12.13□□□□□ -0.47
SRSF4-204ENST00000489898 SLC8A1P32418 973 aa12.13□□□□□ -0.47
SRSF4-204ENST00000489898 PTPN9P43378 593 aa12.13□□□□□ -0.47
SRSF4-204ENST00000489898 AFF3P51826 1226 aaKnown RBP12.13□□□□□ -0.47
SRSF4-204ENST00000489898 BPIFB4P59827 614 aa12.13□□□□□ -0.47
SRSF4-204ENST00000489898 OGDHQ02218 1023 aa12.13□□□□□ -0.47
SRSF4-204ENST00000489898 ARID5AQ03989 594 aa12.13□□□□□ -0.47
SRSF4-204ENST00000489898 E2F5Q15329 346 aa12.13□□□□□ -0.47
SRSF4-204ENST00000489898 STX1AQ16623 288 aa12.13□□□□□ -0.47
SRSF4-204ENST00000489898 CLEC16AQ2KHT3 1053 aa12.13□□□□□ -0.47
SRSF4-204ENST00000489898 TTC31Q49AM3 519 aaPredicted RBP12.13□□□□□ -0.47
SRSF4-204ENST00000489898 SYCP2LQ5T4T6 812 aa12.13□□□□□ -0.47
SRSF4-204ENST00000489898 SLCO6A1Q86UG4 719 aa12.13□□□□□ -0.47
SRSF4-204ENST00000489898 PHF13Q86YI8 300 aaPredicted RBP12.13□□□□□ -0.47
SRSF4-204ENST00000489898 CHST14Q8NCH0 376 aa12.13□□□□□ -0.47
SRSF4-204ENST00000489898 OR7D4Q8NG98 312 aa12.13□□□□□ -0.47
SRSF4-204ENST00000489898 ARRDC3Q96B67 414 aa12.13□□□□□ -0.47
SRSF4-204ENST00000489898 C1orf74Q96LT6 269 aa12.13□□□□□ -0.47
SRSF4-204ENST00000489898 SPAG5Q96R06 1193 aa12.13□□□□□ -0.47
SRSF4-204ENST00000489898 MIR1-1HGQ9H1L0 117 aa12.13□□□□□ -0.47
SRSF4-204ENST00000489898 GPR27Q9NS67 375 aa12.13□□□□□ -0.47
SRSF4-204ENST00000489898 SUN2Q9UH99 717 aa12.13□□□□□ -0.47
SRSF4-204ENST00000489898 WASF2Q9Y6W5 498 aa12.13□□□□□ -0.47
SRSF4-204ENST00000489898 ACACAQ13085 2346 aa12.12□□□□□ -0.47
SRSF4-204ENST00000489898 SPENQ96T58 3664 aaKnown RBP12.12□□□□□ -0.47
SRSF4-204ENST00000489898 ALOX15BO15296 676 aa12.12□□□□□ -0.47
SRSF4-204ENST00000489898 RTN2O75298 545 aa12.12□□□□□ -0.47
SRSF4-204ENST00000489898 SYPP08247 313 aa12.12□□□□□ -0.47
SRSF4-204ENST00000489898 C5AR1P21730 350 aa12.12□□□□□ -0.47
SRSF4-204ENST00000489898 RRM1P23921 792 aa12.12□□□□□ -0.47
SRSF4-204ENST00000489898 RDXP35241 583 aaKnown RBP12.12□□□□□ -0.47
SRSF4-204ENST00000489898 CCR5P51681 352 aa12.12□□□□□ -0.47
SRSF4-204ENST00000489898 RNASE9P60153 205 aaKnown RBP12.12□□□□□ -0.47
SRSF4-204ENST00000489898 SIM1P81133 766 aaPredicted RBP12.12□□□□□ -0.47
SRSF4-204ENST00000489898 DEUP1Q05D60 604 aa12.12□□□□□ -0.47
SRSF4-204ENST00000489898 TYRO3Q06418 890 aa12.12□□□□□ -0.47
SRSF4-204ENST00000489898 SCAPQ12770 1279 aa12.12□□□□□ -0.47
SRSF4-204ENST00000489898 CNTN1Q12860 1018 aa12.12□□□□□ -0.47
SRSF4-204ENST00000489898 RNF219Q5W0B1 726 aaPredicted RBP12.12□□□□□ -0.47
SRSF4-204ENST00000489898 C22orf39Q6P5X5 142 aa12.12□□□□□ -0.47
SRSF4-204ENST00000489898 UNQ6494/PRO21346Q6UXR6 183 aa12.12□□□□□ -0.47
SRSF4-204ENST00000489898 LINGO4Q6UY18 593 aa12.12□□□□□ -0.47
SRSF4-204ENST00000489898 TFAP2DQ7Z6R9 452 aa12.12□□□□□ -0.47
SRSF4-204ENST00000489898 SETD3Q86TU7 594 aaPredicted RBP12.12□□□□□ -0.47
SRSF4-204ENST00000489898 ERICH1Q86X53 443 aa12.12□□□□□ -0.47
SRSF4-204ENST00000489898 SPATS2Q86XZ4 545 aaKnown RBP12.12□□□□□ -0.47
SRSF4-204ENST00000489898 AOPEPQ8N6M6 819 aa12.12□□□□□ -0.47
SRSF4-204ENST00000489898 KDF1Q8NAX2 398 aaPredicted RBP12.12□□□□□ -0.47
SRSF4-204ENST00000489898 TMEM145Q8NBT3 493 aa12.12□□□□□ -0.47
SRSF4-204ENST00000489898 OR2T34Q8NGX1 318 aa12.12□□□□□ -0.47
SRSF4-204ENST00000489898 HAPLN3Q96S86 360 aa12.12□□□□□ -0.47
SRSF4-204ENST00000489898 ACE2Q9BYF1 805 aaPredicted RBP12.12□□□□□ -0.47
SRSF4-204ENST00000489898 GAREM1Q9H706 876 aa12.12□□□□□ -0.47
SRSF4-204ENST00000489898 TM7SF3Q9NS93 570 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms