RNA–Protein interactions for RNA: ENST00000489816.5

BRD9-208, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 3,170 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-208ENST00000489816 GPR152Q8TDT2 470 aa16.02■□□□□ 0.16
BRD9-208ENST00000489816 VPS39Q96JC1 886 aa16.02■□□□□ 0.16
BRD9-208ENST00000489816 SLC2A6Q9UGQ3 507 aa16.02■□□□□ 0.16
BRD9-208ENST00000489816 PLA2G4CQ9UP65 541 aa16.02■□□□□ 0.16
BRD9-208ENST00000489816 AIM2O14862 343 aa16.02■□□□□ 0.15
BRD9-208ENST00000489816 ZBTB14O43829 449 aa16.02■□□□□ 0.15
BRD9-208ENST00000489816 RPL34P49207 117 aaKnown RBP16.02■□□□□ 0.15
BRD9-208ENST00000489816 NAGLUP54802 743 aa16.02■□□□□ 0.15
BRD9-208ENST00000489816 SEPT6Q14141 434 aa16.02■□□□□ 0.15
BRD9-208ENST00000489816 USP10Q14694 798 aaKnown RBP16.02■□□□□ 0.15
BRD9-208ENST00000489816 SPRYD7Q5W111 196 aa16.02■□□□□ 0.15
BRD9-208ENST00000489816 TIFABQ6ZNK6 161 aa16.02■□□□□ 0.15
BRD9-208ENST00000489816 LRRTM3Q86VH5 581 aa16.02■□□□□ 0.15
BRD9-208ENST00000489816 DEFB107AQ8IZN7 70 aa16.02■□□□□ 0.15
BRD9-208ENST00000489816 KCTD4Q8WVF5 259 aa16.02■□□□□ 0.15
BRD9-208ENST00000489816 RBBP8Q99708 897 aa16.02■□□□□ 0.15
BRD9-208ENST00000489816 GABRDO14764 452 aa16.01■□□□□ 0.15
BRD9-208ENST00000489816 SPRP35270 261 aaPredicted RBP16.01■□□□□ 0.15
BRD9-208ENST00000489816 GARSP41250 739 aaKnown RBP16.01■□□□□ 0.15
BRD9-208ENST00000489816 MAP2K5Q13163 448 aa16.01■□□□□ 0.15
BRD9-208ENST00000489816 BLMHQ13867 455 aa16.01■□□□□ 0.15
BRD9-208ENST00000489816 PPM1LQ5SGD2 360 aa16.01■□□□□ 0.15
BRD9-208ENST00000489816 FRMD7Q6ZUT3 714 aa16.01■□□□□ 0.15
BRD9-208ENST00000489816 SCN4BQ8IWT1 228 aa16.01■□□□□ 0.15
BRD9-208ENST00000489816 CCNYL1Q8N7R7 359 aa16.01■□□□□ 0.15
BRD9-208ENST00000489816 SH3TC2Q8TF17 1288 aa16.01■□□□□ 0.15
BRD9-208ENST00000489816 SLC2A13Q96QE2 648 aa16.01■□□□□ 0.15
BRD9-208ENST00000489816 NUF2Q9BZD4 464 aa16.01■□□□□ 0.15
BRD9-208ENST00000489816 SMNDC1O75940 238 aaKnown RBP eCLIP16.01■□□□□ 0.159e-7■■■■□ 19.6
BRD9-208ENST00000489816 TM7SF2O76062 418 aa16.01■□□□□ 0.15
BRD9-208ENST00000489816 GCKP35557 465 aa16.01■□□□□ 0.15
BRD9-208ENST00000489816 TAF1CQ15572 869 aaPredicted RBP16.01■□□□□ 0.15
BRD9-208ENST00000489816 AGMOQ6ZNB7 445 aa16.01■□□□□ 0.15
BRD9-208ENST00000489816 ARCQ7LC44 396 aa16.01■□□□□ 0.15
BRD9-208ENST00000489816 ZNF354CQ86Y25 554 aa16.01■□□□□ 0.15
BRD9-208ENST00000489816 SLC41A1Q8IVJ1 513 aa16.01■□□□□ 0.15
BRD9-208ENST00000489816 SNX31Q8N9S9 440 aa16.01■□□□□ 0.15
BRD9-208ENST00000489816 FAM136AQ96C01 138 aa16.01■□□□□ 0.15
BRD9-208ENST00000489816 CPNE1Q99829 537 aa16.01■□□□□ 0.15
BRD9-208ENST00000489816 IGSF9Q9P2J2 1179 aa16.01■□□□□ 0.15
BRD9-208ENST00000489816 A0A088AWK7 358 aa16.01■□□□□ 0.15
BRD9-208ENST00000489816 TMEM233B4DJY2 109 aa16.01■□□□□ 0.15
BRD9-208ENST00000489816 AURKAO14965 403 aa16.01■□□□□ 0.15
BRD9-208ENST00000489816 CFLARO15519 480 aa16.01■□□□□ 0.15
BRD9-208ENST00000489816 JUNP05412 331 aaKnown RBP16.01■□□□□ 0.15
BRD9-208ENST00000489816 MX2P20592 715 aa16.01■□□□□ 0.15
BRD9-208ENST00000489816 CD52P31358 61 aa16.01■□□□□ 0.15
BRD9-208ENST00000489816 ARL13BQ3SXY8 428 aa16.01■□□□□ 0.15
BRD9-208ENST00000489816 ESRP1Q6NXG1 681 aaKnown RBP16.01■□□□□ 0.15
BRD9-208ENST00000489816 IZUMO2Q6UXV1 221 aa16.01■□□□□ 0.15
BRD9-208ENST00000489816 TFAP2DQ7Z6R9 452 aa16.01■□□□□ 0.15
BRD9-208ENST00000489816 ANKRD23Q86SG2 305 aa16.01■□□□□ 0.15
BRD9-208ENST00000489816 LMNTD2Q8IXW0 634 aa16.01■□□□□ 0.15
BRD9-208ENST00000489816 ARHGAP24Q8N264 748 aa16.01■□□□□ 0.15
BRD9-208ENST00000489816 GATA5Q9BWX5 397 aaPredicted RBP16.01■□□□□ 0.15
BRD9-208ENST00000489816 NMRAL1Q9HBL8 299 aa16.01■□□□□ 0.15
BRD9-208ENST00000489816 SOX13Q9UN79 622 aa16.01■□□□□ 0.15
BRD9-208ENST00000489816 NEMP2A6NFY4 417 aa16■□□□□ 0.15
BRD9-208ENST00000489816 ZNF487B1APH4 448 aa16■□□□□ 0.15
BRD9-208ENST00000489816 AXLP30530 894 aa16■□□□□ 0.15
BRD9-208ENST00000489816 CCNG1P51959 295 aa16■□□□□ 0.15
BRD9-208ENST00000489816 MAXP61244 160 aa16■□□□□ 0.15
BRD9-208ENST00000489816 LPCAT4Q643R3 524 aa16■□□□□ 0.15
BRD9-208ENST00000489816 GDF6Q6KF10 455 aaPredicted RBP16■□□□□ 0.15
BRD9-208ENST00000489816 PPFIBP2Q8ND30 876 aa16■□□□□ 0.15
BRD9-208ENST00000489816 GTF2IRD1Q9UHL9 959 aa16■□□□□ 0.15
BRD9-208ENST00000489816 RUVBL2Q9Y230 463 aaKnown RBP16■□□□□ 0.15
BRD9-208ENST00000489816 M0QZ92 97 aa16■□□□□ 0.15
BRD9-208ENST00000489816 MT-CO1P00395 513 aa16■□□□□ 0.15
BRD9-208ENST00000489816 ANPEPP15144 967 aa16■□□□□ 0.15
BRD9-208ENST00000489816 CNTFP26441 200 aa16■□□□□ 0.15
BRD9-208ENST00000489816 CPOXP36551 454 aa16■□□□□ 0.15
BRD9-208ENST00000489816 COPAP53621 1224 aa16■□□□□ 0.15
BRD9-208ENST00000489816 PPIDQ08752 370 aaKnown RBP16■□□□□ 0.15
BRD9-208ENST00000489816 CNGA3Q16281 694 aa16■□□□□ 0.15
BRD9-208ENST00000489816 SPANXN3Q5MJ09 141 aa16■□□□□ 0.15
BRD9-208ENST00000489816 C6orf163Q5TEZ5 329 aa16■□□□□ 0.15
BRD9-208ENST00000489816 LDB1Q86U70 411 aaPredicted RBP16■□□□□ 0.15
BRD9-208ENST00000489816 DQX1Q8TE96 717 aaKnown RBP16■□□□□ 0.15
BRD9-208ENST00000489816 EPAS1Q99814 870 aa16■□□□□ 0.15
BRD9-208ENST00000489816 DICER1Q9UPY3 1922 aaKnown RBP16■□□□□ 0.15
BRD9-208ENST00000489816 CHRNA1P02708 482 aa15.99■□□□□ 0.15
BRD9-208ENST00000489816 CPT1AP50416 773 aa15.99■□□□□ 0.15
BRD9-208ENST00000489816 PLK1P53350 603 aa15.99■□□□□ 0.15
BRD9-208ENST00000489816 LIMK2P53671 638 aa15.99■□□□□ 0.15
BRD9-208ENST00000489816 PURAQ00577 322 aaKnown RBP15.99■□□□□ 0.15
BRD9-208ENST00000489816 CDC42EP1Q00587 391 aa15.99■□□□□ 0.15
BRD9-208ENST00000489816 PDCD2Q16342 344 aaPredicted RBP15.99■□□□□ 0.15
BRD9-208ENST00000489816 XKR4Q5GH76 650 aa15.99■□□□□ 0.15
BRD9-208ENST00000489816 RABGAP1LQ5R372 815 aa15.99■□□□□ 0.15
BRD9-208ENST00000489816 GRTP1Q5TC63 336 aa15.99■□□□□ 0.15
BRD9-208ENST00000489816 RNF220Q5VTB9 566 aa15.99■□□□□ 0.15
BRD9-208ENST00000489816 PDZD4Q76G19 769 aaPredicted RBP15.99■□□□□ 0.15
BRD9-208ENST00000489816 TMEM135Q86UB9 458 aa15.99■□□□□ 0.15
BRD9-208ENST00000489816 TDRD5Q8NAT2 981 aaKnown RBP15.99■□□□□ 0.15
BRD9-208ENST00000489816 NDNQ99608 321 aa15.99■□□□□ 0.15
BRD9-208ENST00000489816 CYP4F12Q9HCS2 524 aa15.99■□□□□ 0.15
BRD9-208ENST00000489816 RCOR3Q9P2K3 495 aaPredicted RBP15.99■□□□□ 0.15
BRD9-208ENST00000489816 STX18Q9P2W9 335 aaKnown RBP15.99■□□□□ 0.15
BRD9-208ENST00000489816 G3V2L1 256 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms