RNA–Protein interactions for RNA: ENST00000489573.5

SMC4-221, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 1 (best)

Gene SMC4, Length 1,553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-221ENST00000489573 APRTP07741 180 aa22.12■■□□□ 1.13
SMC4-221ENST00000489573 TPSB2P20231 275 aa22.12■■□□□ 1.13
SMC4-221ENST00000489573 FSHRP23945 695 aa22.12■■□□□ 1.13
SMC4-221ENST00000489573 IL10RBQ08334 325 aa22.12■■□□□ 1.13
SMC4-221ENST00000489573 CBX2Q14781 532 aaPredicted RBP22.12■■□□□ 1.13
SMC4-221ENST00000489573 TPSAB1Q15661 275 aa22.12■■□□□ 1.13
SMC4-221ENST00000489573 LRIT3Q3SXY7 679 aa22.12■■□□□ 1.13
SMC4-221ENST00000489573 MPPE1Q53F39 396 aa22.12■■□□□ 1.13
SMC4-221ENST00000489573 SPDYCQ5MJ68 293 aa22.12■■□□□ 1.13
SMC4-221ENST00000489573 POTEHQ6S545 545 aa22.12■■□□□ 1.13
SMC4-221ENST00000489573 PPP1R21Q6ZMI0 780 aa22.12■■□□□ 1.13
SMC4-221ENST00000489573 USP33Q8TEY7 942 aa22.12■■□□□ 1.13
SMC4-221ENST00000489573 AGAP3Q96P47 875 aa22.12■■□□□ 1.13
SMC4-221ENST00000489573 KIF9Q9HAQ2 790 aa22.12■■□□□ 1.13
SMC4-221ENST00000489573 RSPH14Q9UHP6 348 aa22.12■■□□□ 1.13
SMC4-221ENST00000489573 J3KR12 359 aa22.11■■□□□ 1.13
SMC4-221ENST00000489573 LUC7L3O95232 432 aaKnown RBP22.11■■□□□ 1.13
SMC4-221ENST00000489573 WEE1P30291 646 aa22.11■■□□□ 1.13
SMC4-221ENST00000489573 HSD17B3P37058 310 aa22.11■■□□□ 1.13
SMC4-221ENST00000489573 ARL4CP56559 192 aa22.11■■□□□ 1.13
SMC4-221ENST00000489573 GAD2Q05329 585 aa22.11■■□□□ 1.13
SMC4-221ENST00000489573 MPP7Q5T2T1 576 aa22.11■■□□□ 1.13
SMC4-221ENST00000489573 CXorf57Q6NSI4 855 aaKnown RBP22.11■■□□□ 1.13
SMC4-221ENST00000489573 SYCE2Q6PIF2 218 aa22.11■■□□□ 1.13
SMC4-221ENST00000489573 ZNF783Q6ZMS7 281 aa22.11■■□□□ 1.13
SMC4-221ENST00000489573 CARNMT1Q8N4J0 409 aa22.11■■□□□ 1.13
SMC4-221ENST00000489573 OR52K2Q8NGK3 314 aa22.11■■□□□ 1.13
SMC4-221ENST00000489573 DDI1Q8WTU0 396 aa22.11■■□□□ 1.13
SMC4-221ENST00000489573 NSMCE1Q8WV22 266 aa22.11■■□□□ 1.13
SMC4-221ENST00000489573 UBLCP1Q8WVY7 318 aaPredicted RBP22.11■■□□□ 1.13
SMC4-221ENST00000489573 RBM15Q96T37 977 aaKnown RBP eCLIP22.11■■□□□ 1.135e-67■■■■■ 212.6
SMC4-221ENST00000489573 PHACTR1Q9C0D0 580 aa22.11■■□□□ 1.13
SMC4-221ENST00000489573 SHROOM3Q8TF72 1996 aa22.1■■□□□ 1.13
SMC4-221ENST00000489573 A0A0D9SEW6 157 aa22.1■■□□□ 1.13
SMC4-221ENST00000489573 A0A1W2PPC1 479 aa22.1■■□□□ 1.13
SMC4-221ENST00000489573 F5H423 210 aaPredicted RBP22.1■■□□□ 1.13
SMC4-221ENST00000489573 H0Y626 953 aa22.1■■□□□ 1.13
SMC4-221ENST00000489573 PEX11BO96011 259 aa22.1■■□□□ 1.13
SMC4-221ENST00000489573 HOXB8P17481 243 aaPredicted RBP22.1■■□□□ 1.13
SMC4-221ENST00000489573 CD68P34810 354 aaPredicted RBP22.1■■□□□ 1.13
SMC4-221ENST00000489573 ETFBP38117 255 aa22.1■■□□□ 1.13
SMC4-221ENST00000489573 HNRNPDQ14103 355 aaKnown RBP22.1■■□□□ 1.13
SMC4-221ENST00000489573 UAP1Q16222 522 aaPredicted RBP22.1■■□□□ 1.13
SMC4-221ENST00000489573 HIF1AQ16665 826 aa22.1■■□□□ 1.13
SMC4-221ENST00000489573 SYCP2LQ5T4T6 812 aa22.1■■□□□ 1.13
SMC4-221ENST00000489573 CENPUQ71F23 418 aa22.1■■□□□ 1.13
SMC4-221ENST00000489573 NPAS3Q8IXF0 933 aa22.1■■□□□ 1.13
SMC4-221ENST00000489573 MCUQ8NE86 351 aa22.1■■□□□ 1.13
SMC4-221ENST00000489573 OR7D4Q8NG98 312 aa22.1■■□□□ 1.13
SMC4-221ENST00000489573 FRMD8Q9BZ67 464 aaPredicted RBP22.1■■□□□ 1.13
SMC4-221ENST00000489573 EIF2B3Q9NR50 452 aaKnown RBP22.1■■□□□ 1.13
SMC4-221ENST00000489573 RBM22Q9NW64 420 aaKnown RBP eCLIP22.1■■□□□ 1.135e-24■■■■■ 66.5
SMC4-221ENST00000489573 TBC1D14Q9P2M4 693 aa22.1■■□□□ 1.13
SMC4-221ENST00000489573 PRAMEF11O60813 436 aa22.09■■□□□ 1.13
SMC4-221ENST00000489573 NEBLO76041 1014 aa22.09■■□□□ 1.13
SMC4-221ENST00000489573 CYBBP04839 570 aa22.09■■□□□ 1.13
SMC4-221ENST00000489573 NFKB1P19838 968 aa22.09■■□□□ 1.13
SMC4-221ENST00000489573 HOXD9P28356 352 aaPredicted RBP22.09■■□□□ 1.13
SMC4-221ENST00000489573 LMAN1P49257 510 aa22.09■■□□□ 1.13
SMC4-221ENST00000489573 RENBPP51606 427 aa22.09■■□□□ 1.13
SMC4-221ENST00000489573 ADAM15Q13444 863 aa22.09■■□□□ 1.13
SMC4-221ENST00000489573 CDH18Q13634 790 aa22.09■■□□□ 1.13
SMC4-221ENST00000489573 IL31Q6EBC2 164 aa22.09■■□□□ 1.13
SMC4-221ENST00000489573 TRMT10CQ7L0Y3 403 aaKnown RBP22.09■■□□□ 1.13
SMC4-221ENST00000489573 RELL1Q8IUW5 271 aa22.09■■□□□ 1.13
SMC4-221ENST00000489573 CELF5Q8N6W0 485 aaKnown RBP22.09■■□□□ 1.13
SMC4-221ENST00000489573 CNTD1Q8N815 330 aa22.09■■□□□ 1.13
SMC4-221ENST00000489573 PABPC5Q96DU9 382 aaKnown RBP22.09■■□□□ 1.13
SMC4-221ENST00000489573 ACBD3Q9H3P7 528 aa22.09■■□□□ 1.13
SMC4-221ENST00000489573 C2orf16Q68DN1 1984 aa22.09■■□□□ 1.13
SMC4-221ENST00000489573 TMEM265A0A087WTH1 108 aa22.08■■□□□ 1.13
SMC4-221ENST00000489573 EIF3HO15372 352 aaKnown RBP eCLIP22.08■■□□□ 1.13
SMC4-221ENST00000489573 CDK16Q00536 496 aa22.08■■□□□ 1.13
SMC4-221ENST00000489573 CFAP58Q5T655 872 aa22.08■■□□□ 1.13
SMC4-221ENST00000489573 RNF219Q5W0B1 726 aaPredicted RBP22.08■■□□□ 1.13
SMC4-221ENST00000489573 TPGS1Q6ZTW0 290 aa22.08■■□□□ 1.13
SMC4-221ENST00000489573 GET4Q7L5D6 327 aaPredicted RBP22.08■■□□□ 1.13
SMC4-221ENST00000489573 MFN1Q8IWA4 741 aa22.08■■□□□ 1.13
SMC4-221ENST00000489573 PDIK1LQ8N165 341 aa22.08■■□□□ 1.13
SMC4-221ENST00000489573 SPON2Q9BUD6 331 aa22.08■■□□□ 1.13
SMC4-221ENST00000489573 MUC3BQ9H195 1237 aa22.08■■□□□ 1.13
SMC4-221ENST00000489573 PABPC3Q9H361 631 aaKnown RBP22.08■■□□□ 1.13
SMC4-221ENST00000489573 CDC42EP4Q9H3Q1 356 aaKnown RBP22.08■■□□□ 1.13
SMC4-221ENST00000489573 SEMA4AQ9H3S1 761 aa22.08■■□□□ 1.13
SMC4-221ENST00000489573 SAYSD1Q9NPB0 183 aa22.08■■□□□ 1.13
SMC4-221ENST00000489573 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP22.08■■□□□ 1.12
SMC4-221ENST00000489573 KDELR3O43731 214 aa22.08■■□□□ 1.12
SMC4-221ENST00000489573 HLA-DQB2P05538 268 aa22.08■■□□□ 1.12
SMC4-221ENST00000489573 OXCT1P55809 520 aa22.08■■□□□ 1.12
SMC4-221ENST00000489573 PRPSAP1Q14558 356 aa22.08■■□□□ 1.12
SMC4-221ENST00000489573 TMCO4Q5TGY1 634 aa22.08■■□□□ 1.12
SMC4-221ENST00000489573 MARC1Q5VT66 337 aa22.08■■□□□ 1.12
SMC4-221ENST00000489573 ALS2CLQ60I27 953 aa22.08■■□□□ 1.12
SMC4-221ENST00000489573 CCDC117Q8IWD4 279 aaPredicted RBP22.08■■□□□ 1.12
SMC4-221ENST00000489573 BHMTQ93088 406 aa22.08■■□□□ 1.12
SMC4-221ENST00000489573 OTUB2Q96DC9 234 aa22.08■■□□□ 1.12
SMC4-221ENST00000489573 ZNF419Q96HQ0 510 aaPredicted RBP22.08■■□□□ 1.12
SMC4-221ENST00000489573 ZNF599Q96NL3 588 aa22.08■■□□□ 1.12
SMC4-221ENST00000489573 GORASP1Q9BQQ3 440 aa22.08■■□□□ 1.12
SMC4-221ENST00000489573 ACE2Q9BYF1 805 aaPredicted RBP22.08■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms