RNA–Protein interactions for RNA: ENST00000489537.5

SF3A3-208, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 4

Gene SF3A3, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-208ENST00000489537 MT-ND3P03897 115 aa6.51□□□□□ -1.37
SF3A3-208ENST00000489537 SOD2P04179 222 aa6.51□□□□□ -1.37
SF3A3-208ENST00000489537 URODP06132 367 aa6.51□□□□□ -1.37
SF3A3-208ENST00000489537 FYNP06241 537 aa6.51□□□□□ -1.37
SF3A3-208ENST00000489537 SNRPAP09012 282 aaKnown RBP6.51□□□□□ -1.37
SF3A3-208ENST00000489537 BRAFP15056 766 aa6.51□□□□□ -1.37
SF3A3-208ENST00000489537 MYOGP15173 224 aa6.51□□□□□ -1.37
SF3A3-208ENST00000489537 PGAM1P18669 254 aa6.51□□□□□ -1.37
SF3A3-208ENST00000489537 PAMP19021 973 aa6.51□□□□□ -1.37
SF3A3-208ENST00000489537 AMPD1P23109 780 aa6.51□□□□□ -1.37
SF3A3-208ENST00000489537 PRKCHP24723 683 aa6.51□□□□□ -1.37
SF3A3-208ENST00000489537 DNAJB1P25685 340 aa6.51□□□□□ -1.37
SF3A3-208ENST00000489537 ALDH3A1P30838 453 aa6.51□□□□□ -1.37
SF3A3-208ENST00000489537 ELF1P32519 619 aa6.51□□□□□ -1.37
SF3A3-208ENST00000489537 CHKAP35790 457 aa6.51□□□□□ -1.37
SF3A3-208ENST00000489537 ELK3P41970 407 aa6.51□□□□□ -1.37
SF3A3-208ENST00000489537 SLC11A1P49279 550 aa6.51□□□□□ -1.37
SF3A3-208ENST00000489537 SLC11A2P49281 568 aa6.51□□□□□ -1.37
SF3A3-208ENST00000489537 HARS2P49590 506 aaKnown RBP6.51□□□□□ -1.37
SF3A3-208ENST00000489537 NDUFV1P49821 464 aa6.51□□□□□ -1.37
SF3A3-208ENST00000489537 ATP1A2P50993 1020 aa6.51□□□□□ -1.37
SF3A3-208ENST00000489537 GEMP55040 296 aa6.51□□□□□ -1.37
SF3A3-208ENST00000489537 OXCT1P55809 520 aa6.51□□□□□ -1.37
SF3A3-208ENST00000489537 TBX4P57082 545 aa6.51□□□□□ -1.37
SF3A3-208ENST00000489537 IFI35P80217 286 aaPredicted RBP6.51□□□□□ -1.37
SF3A3-208ENST00000489537 GBE1Q04446 702 aa6.51□□□□□ -1.37
SF3A3-208ENST00000489537 CDH17Q12864 832 aa6.51□□□□□ -1.37
SF3A3-208ENST00000489537 EIF4EBP2Q13542 120 aaPredicted RBP6.51□□□□□ -1.37
SF3A3-208ENST00000489537 ADGRE1Q14246 886 aa6.51□□□□□ -1.37
SF3A3-208ENST00000489537 SPARCL1Q14515 664 aa6.51□□□□□ -1.37
SF3A3-208ENST00000489537 PSMD5Q16401 504 aa6.51□□□□□ -1.37
SF3A3-208ENST00000489537 CA9Q16790 459 aa6.51□□□□□ -1.37
SF3A3-208ENST00000489537 UGP2Q16851 508 aa6.51□□□□□ -1.37
SF3A3-208ENST00000489537 LONRF1Q17RB8 773 aa6.51□□□□□ -1.37
SF3A3-208ENST00000489537 MGAT5BQ3V5L5 792 aa6.51□□□□□ -1.37
SF3A3-208ENST00000489537 PARP15Q460N3 678 aa6.51□□□□□ -1.37
SF3A3-208ENST00000489537 RABGAP1LQ5R372 815 aa6.51□□□□□ -1.37
SF3A3-208ENST00000489537 SYPL2Q5VXT5 272 aa6.51□□□□□ -1.37
SF3A3-208ENST00000489537 ZNF783Q6ZMS7 281 aa6.51□□□□□ -1.37
SF3A3-208ENST00000489537 NLRP9Q7RTR0 991 aa6.51□□□□□ -1.37
SF3A3-208ENST00000489537 PID1Q7Z2X4 250 aa6.51□□□□□ -1.37
SF3A3-208ENST00000489537 SPRED2Q7Z698 418 aa6.51□□□□□ -1.37
SF3A3-208ENST00000489537 CCDC91Q7Z6B0 441 aa6.51□□□□□ -1.37
SF3A3-208ENST00000489537 TAC4Q86UU9 113 aa6.51□□□□□ -1.37
SF3A3-208ENST00000489537 LRRTM3Q86VH5 581 aa6.51□□□□□ -1.37
SF3A3-208ENST00000489537 CEP57Q86XR8 500 aa6.51□□□□□ -1.37
SF3A3-208ENST00000489537 LMNTD2Q8IXW0 634 aa6.51□□□□□ -1.37
SF3A3-208ENST00000489537 UMODL1-AS1Q8N2C9 162 aa6.51□□□□□ -1.37
SF3A3-208ENST00000489537 RTL3Q8N8U3 475 aaKnown RBP6.51□□□□□ -1.37
SF3A3-208ENST00000489537 ZNF557Q8N988 423 aaPredicted RBP6.51□□□□□ -1.37
SF3A3-208ENST00000489537 COLGALT1Q8NBJ5 622 aa6.51□□□□□ -1.37
SF3A3-208ENST00000489537 OR2W6PQ8NHA6 318 aa6.51□□□□□ -1.37
SF3A3-208ENST00000489537 ZNF461Q8TAF7 563 aa6.51□□□□□ -1.37
SF3A3-208ENST00000489537 RAB3IL1Q8TBN0 382 aa6.51□□□□□ -1.37
SF3A3-208ENST00000489537 ATXN2LQ8WWM7 1075 aaKnown RBP6.51□□□□□ -1.37
SF3A3-208ENST00000489537 LINC01599Q8WXQ3 324 aa6.51□□□□□ -1.37
SF3A3-208ENST00000489537 PLD4Q96BZ4 506 aa6.51□□□□□ -1.37
SF3A3-208ENST00000489537 STAMBPL1Q96FJ0 436 aa6.51□□□□□ -1.37
SF3A3-208ENST00000489537 P2RY11Q96G91 374 aa6.51□□□□□ -1.37
SF3A3-208ENST00000489537 TRMT2BQ96GJ1 504 aaKnown RBP6.51□□□□□ -1.37
SF3A3-208ENST00000489537 SCARF2Q96GP6 870 aaPredicted RBP6.51□□□□□ -1.37
SF3A3-208ENST00000489537 ZNF599Q96NL3 588 aa6.51□□□□□ -1.37
SF3A3-208ENST00000489537 XPO6Q96QU8 1125 aaKnown RBP6.51□□□□□ -1.37
SF3A3-208ENST00000489537 EBNA1BP2Q99848 306 aaKnown RBP6.51□□□□□ -1.37
SF3A3-208ENST00000489537 FAM118BQ9BPY3 351 aa6.51□□□□□ -1.37
SF3A3-208ENST00000489537 MAGEB5Q9BZ81 275 aa6.51□□□□□ -1.37
SF3A3-208ENST00000489537 ZYG11BQ9C0D3 744 aa6.51□□□□□ -1.37
SF3A3-208ENST00000489537 IL22Q9GZX6 179 aa6.51□□□□□ -1.37
SF3A3-208ENST00000489537 GBA3Q9H227 469 aa6.51□□□□□ -1.37
SF3A3-208ENST00000489537 PRDM12Q9H4Q4 367 aa6.51□□□□□ -1.37
SF3A3-208ENST00000489537 KCNK9Q9NPC2 374 aa6.51□□□□□ -1.37
SF3A3-208ENST00000489537 ENTPD7Q9NQZ7 604 aa6.51□□□□□ -1.37
SF3A3-208ENST00000489537 RNF19AQ9NV58 838 aa6.51□□□□□ -1.37
SF3A3-208ENST00000489537 GPATCH2LQ9NWQ4 482 aa6.51□□□□□ -1.37
SF3A3-208ENST00000489537 SPG21Q9NZD8 308 aa6.51□□□□□ -1.37
SF3A3-208ENST00000489537 TRPM5Q9NZQ8 1165 aa6.51□□□□□ -1.37
SF3A3-208ENST00000489537 MARCH2Q9P0N8 246 aa6.51□□□□□ -1.37
SF3A3-208ENST00000489537 SAE1Q9UBE0 346 aaPredicted RBP6.51□□□□□ -1.37
SF3A3-208ENST00000489537 PRKAG2Q9UGJ0 569 aa6.51□□□□□ -1.37
SF3A3-208ENST00000489537 DPP7Q9UHL4 492 aa6.51□□□□□ -1.37
SF3A3-208ENST00000489537 IPO11Q9UI26 975 aaKnown RBP6.51□□□□□ -1.37
SF3A3-208ENST00000489537 ZNF510Q9Y2H8 683 aa6.51□□□□□ -1.37
SF3A3-208ENST00000489537 YBX2Q9Y2T7 364 aaKnown RBP6.51□□□□□ -1.37
SF3A3-208ENST00000489537 DYRK1BQ9Y463 629 aa6.51□□□□□ -1.37
SF3A3-208ENST00000489537 PCDHB12Q9Y5F1 795 aa6.51□□□□□ -1.37
SF3A3-208ENST00000489537 TEX264Q9Y6I9 313 aa6.51□□□□□ -1.37
SF3A3-208ENST00000489537 FAM169AQ9Y6X4 670 aa6.51□□□□□ -1.37
SF3A3-208ENST00000489537 TTC28Q96AY4 2481 aa6.5□□□□□ -1.37
SF3A3-208ENST00000489537 GBF1Q92538 1859 aa6.5□□□□□ -1.37
SF3A3-208ENST00000489537 SYNJ2BP-COX16A0A087WUM0 186 aa6.5□□□□□ -1.37
SF3A3-208ENST00000489537 CXorf51AA0A1B0GTR3 108 aa6.5□□□□□ -1.37
SF3A3-208ENST00000489537 MTMR11A4FU01 709 aa6.5□□□□□ -1.37
SF3A3-208ENST00000489537 I3L4J1 428 aa6.5□□□□□ -1.37
SF3A3-208ENST00000489537 MFSD11O43934 449 aa6.5□□□□□ -1.37
SF3A3-208ENST00000489537 ALDH1A2O94788 518 aa6.5□□□□□ -1.37
SF3A3-208ENST00000489537 LRIG2O94898 1065 aa6.5□□□□□ -1.37
SF3A3-208ENST00000489537 AP2A1O95782 977 aa6.5□□□□□ -1.37
SF3A3-208ENST00000489537 SHBGP04278 402 aa6.5□□□□□ -1.37
SF3A3-208ENST00000489537 ZDHHC11BP0C7U3 371 aa6.5□□□□□ -1.37
SF3A3-208ENST00000489537 ZSCAN5DPP0CG00 497 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms