RNA–Protein interactions for RNA: ENST00000489357.5

VTI1A-207, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 3

Gene VTI1A, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-207ENST00000489357 BIRC5O15392 142 aa8.66□□□□□ -1.02
VTI1A-207ENST00000489357 HCRTO43612 131 aa8.66□□□□□ -1.02
VTI1A-207ENST00000489357 MFSD11O43934 449 aa8.66□□□□□ -1.02
VTI1A-207ENST00000489357 LPXNO60711 386 aa8.66□□□□□ -1.02
VTI1A-207ENST00000489357 BEST1O76090 585 aa8.66□□□□□ -1.02
VTI1A-207ENST00000489357 OAZ2O95190 189 aa8.66□□□□□ -1.02
VTI1A-207ENST00000489357 IGLV3-25P01717 112 aa8.66□□□□□ -1.02
VTI1A-207ENST00000489357 FYNP06241 537 aa8.66□□□□□ -1.02
VTI1A-207ENST00000489357 TROVE2P10155 538 aaKnown RBP eCLIP8.66□□□□□ -1.02
VTI1A-207ENST00000489357 SLC2A3P11169 496 aa8.66□□□□□ -1.02
VTI1A-207ENST00000489357 NCAM1P13591 858 aa8.66□□□□□ -1.02
VTI1A-207ENST00000489357 PGAM1P18669 254 aa8.66□□□□□ -1.02
VTI1A-207ENST00000489357 AMPD1P23109 780 aa8.66□□□□□ -1.02
VTI1A-207ENST00000489357 ACAT1P24752 427 aaKnown RBP8.66□□□□□ -1.02
VTI1A-207ENST00000489357 HOXC13P31276 330 aa8.66□□□□□ -1.02
VTI1A-207ENST00000489357 RPA3P35244 121 aaPredicted RBP8.66□□□□□ -1.02
VTI1A-207ENST00000489357 HADHAP40939 763 aa8.66□□□□□ -1.02
VTI1A-207ENST00000489357 LIG3P49916 1009 aa8.66□□□□□ -1.02
VTI1A-207ENST00000489357 NEK3P51956 506 aa8.66□□□□□ -1.02
VTI1A-207ENST00000489357 RELBQ01201 579 aa8.66□□□□□ -1.02
VTI1A-207ENST00000489357 DSC1Q08554 894 aa8.66□□□□□ -1.02
VTI1A-207ENST00000489357 EIF4EBP2Q13542 120 aaPredicted RBP8.66□□□□□ -1.02
VTI1A-207ENST00000489357 PPP2R5DQ14738 602 aa8.66□□□□□ -1.02
VTI1A-207ENST00000489357 NFE2Q16621 373 aaPredicted RBP8.66□□□□□ -1.02
VTI1A-207ENST00000489357 SPANXN3Q5MJ09 141 aa8.66□□□□□ -1.02
VTI1A-207ENST00000489357 KIAA0319Q5VV43 1072 aa8.66□□□□□ -1.02
VTI1A-207ENST00000489357 SYPL2Q5VXT5 272 aa8.66□□□□□ -1.02
VTI1A-207ENST00000489357 OVOS1Q6IE37 1185 aa8.66□□□□□ -1.02
VTI1A-207ENST00000489357 LVRNQ6Q4G3 990 aa8.66□□□□□ -1.02
VTI1A-207ENST00000489357 KYAT3Q6YP21 454 aaKnown RBP8.66□□□□□ -1.02
VTI1A-207ENST00000489357 ZNF534Q76KX8 674 aa8.66□□□□□ -1.02
VTI1A-207ENST00000489357 SPRED2Q7Z698 418 aa8.66□□□□□ -1.02
VTI1A-207ENST00000489357 LCA5Q86VQ0 697 aa8.66□□□□□ -1.02
VTI1A-207ENST00000489357 LINC00528Q8N1L1 170 aa8.66□□□□□ -1.02
VTI1A-207ENST00000489357 COLGALT1Q8NBJ5 622 aa8.66□□□□□ -1.02
VTI1A-207ENST00000489357 ZMIZ2Q8NF64 920 aa8.66□□□□□ -1.02
VTI1A-207ENST00000489357 SLC7A14Q8TBB6 771 aa8.66□□□□□ -1.02
VTI1A-207ENST00000489357 URGCPQ8TCY9 931 aa8.66□□□□□ -1.02
VTI1A-207ENST00000489357 MGARPQ8TDB4 240 aa8.66□□□□□ -1.02
VTI1A-207ENST00000489357 ATP2A3Q93084 1043 aa8.66□□□□□ -1.02
VTI1A-207ENST00000489357 P2RY11Q96G91 374 aa8.66□□□□□ -1.02
VTI1A-207ENST00000489357 TSGA13Q96PP4 275 aa8.66□□□□□ -1.02
VTI1A-207ENST00000489357 SIKE1Q9BRV8 207 aa8.66□□□□□ -1.02
VTI1A-207ENST00000489357 IQCGQ9H095 443 aaKnown RBP8.66□□□□□ -1.02
VTI1A-207ENST00000489357 RETREG1Q9H6L5 497 aa8.66□□□□□ -1.02
VTI1A-207ENST00000489357 WDCPQ9H6R7 721 aa8.66□□□□□ -1.02
VTI1A-207ENST00000489357 CWH43Q9H720 699 aa8.66□□□□□ -1.02
VTI1A-207ENST00000489357 COMMD8Q9NX08 183 aa8.66□□□□□ -1.02
VTI1A-207ENST00000489357 DDIT4Q9NX09 232 aa8.66□□□□□ -1.02
VTI1A-207ENST00000489357 PHTF1Q9UMS5 762 aa8.66□□□□□ -1.02
VTI1A-207ENST00000489357 CAPN7Q9Y6W3 813 aa8.66□□□□□ -1.02
VTI1A-207ENST00000489357 NCOR1O75376 2440 aa8.66□□□□□ -1.02
VTI1A-207ENST00000489357 A0A1W2PPM1 405 aa8.65□□□□□ -1.02
VTI1A-207ENST00000489357 EPOPA6NHQ4 379 aa8.65□□□□□ -1.02
VTI1A-207ENST00000489357 CLDN5O00501 218 aa8.65□□□□□ -1.02
VTI1A-207ENST00000489357 C2CD2LO14523 706 aa8.65□□□□□ -1.02
VTI1A-207ENST00000489357 NRP1O14786 923 aa8.65□□□□□ -1.02
VTI1A-207ENST00000489357 SYN3O14994 580 aa8.65□□□□□ -1.02
VTI1A-207ENST00000489357 RASSF9O75901 435 aa8.65□□□□□ -1.02
VTI1A-207ENST00000489357 METTL18O95568 372 aa8.65□□□□□ -1.02
VTI1A-207ENST00000489357 AP2A1O95782 977 aa8.65□□□□□ -1.02
VTI1A-207ENST00000489357 RB1P06400 928 aa8.65□□□□□ -1.02
VTI1A-207ENST00000489357 POLBP06746 335 aa8.65□□□□□ -1.02
VTI1A-207ENST00000489357 BMP1P13497 986 aa8.65□□□□□ -1.02
VTI1A-207ENST00000489357 ERCC2P18074 760 aa8.65□□□□□ -1.02
VTI1A-207ENST00000489357 DNAJB1P25685 340 aa8.65□□□□□ -1.02
VTI1A-207ENST00000489357 BMPR1AP36894 532 aa8.65□□□□□ -1.02
VTI1A-207ENST00000489357 ETV4P43268 484 aa8.65□□□□□ -1.02
VTI1A-207ENST00000489357 GATMP50440 423 aa8.65□□□□□ -1.02
VTI1A-207ENST00000489357 RASSF2P50749 326 aa8.65□□□□□ -1.02
VTI1A-207ENST00000489357 AFF1P51825 1210 aaKnown RBP8.65□□□□□ -1.02
VTI1A-207ENST00000489357 YWHAHQ04917 246 aaPredicted RBP8.65□□□□□ -1.02
VTI1A-207ENST00000489357 GAD2Q05329 585 aa8.65□□□□□ -1.02
VTI1A-207ENST00000489357 IFRD2Q12894 506 aaPredicted RBP8.65□□□□□ -1.02
VTI1A-207ENST00000489357 BNIP1Q12981 228 aa8.65□□□□□ -1.02
VTI1A-207ENST00000489357 NME3Q13232 169 aa8.65□□□□□ -1.02
VTI1A-207ENST00000489357 RIPK1Q13546 671 aa8.65□□□□□ -1.02
VTI1A-207ENST00000489357 INSCQ1MX18 579 aa8.65□□□□□ -1.02
VTI1A-207ENST00000489357 HP1BP3Q5SSJ5 553 aaPredicted RBP8.65□□□□□ -1.02
VTI1A-207ENST00000489357 BSPRYQ5W0U4 402 aa8.65□□□□□ -1.02
VTI1A-207ENST00000489357 FAM117BQ6P1L5 589 aa8.65□□□□□ -1.02
VTI1A-207ENST00000489357 UNC5AQ6ZN44 842 aa8.65□□□□□ -1.02
VTI1A-207ENST00000489357 BHLHA9Q7RTU4 235 aa8.65□□□□□ -1.02
VTI1A-207ENST00000489357 TRIM46Q7Z4K8 759 aa8.65□□□□□ -1.02
VTI1A-207ENST00000489357 LINC00523Q86TU6 105 aa8.65□□□□□ -1.02
VTI1A-207ENST00000489357 IGDCC3Q8IVU1 814 aa8.65□□□□□ -1.02
VTI1A-207ENST00000489357 DCP1BQ8IZD4 617 aaKnown RBP8.65□□□□□ -1.02
VTI1A-207ENST00000489357 KDF1Q8NAX2 398 aaPredicted RBP8.65□□□□□ -1.02
VTI1A-207ENST00000489357 C3orf58Q8NDZ4 430 aa8.65□□□□□ -1.02
VTI1A-207ENST00000489357 GDAP1Q8TB36 358 aa8.65□□□□□ -1.02
VTI1A-207ENST00000489357 MAGEC3Q8TD91 643 aa8.65□□□□□ -1.02
VTI1A-207ENST00000489357 TCP10LQ8TDR4 215 aa8.65□□□□□ -1.02
VTI1A-207ENST00000489357 ZNF75CPQ92670 426 aaPredicted RBP8.65□□□□□ -1.02
VTI1A-207ENST00000489357 MYLPFQ96A32 169 aa8.65□□□□□ -1.02
VTI1A-207ENST00000489357 SAMD11Q96NU1 681 aa8.65□□□□□ -1.02
VTI1A-207ENST00000489357 LPIN3Q9BQK8 851 aa8.65□□□□□ -1.02
VTI1A-207ENST00000489357 RTP3Q9BQQ7 232 aa8.65□□□□□ -1.02
VTI1A-207ENST00000489357 TUBB6Q9BUF5 446 aa8.65□□□□□ -1.02
VTI1A-207ENST00000489357 GBA3Q9H227 469 aa8.65□□□□□ -1.02
VTI1A-207ENST00000489357 SMOC2Q9H3U7 446 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms