RNA–Protein interactions for RNA: ENST00000489131.1

TOP3A-206, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-206ENST00000489131 MARK1Q9P0L2 795 aa13.12□□□□□ -0.31
TOP3A-206ENST00000489131 CLEC1BQ9P126 229 aa13.12□□□□□ -0.31
TOP3A-206ENST00000489131 IPO11Q9UI26 975 aaKnown RBP13.12□□□□□ -0.31
TOP3A-206ENST00000489131 NUP205Q92621 2012 aa13.12□□□□□ -0.31
TOP3A-206ENST00000489131 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.11□□□□□ -0.31
TOP3A-206ENST00000489131 SPDYE4A6NLX3 237 aa13.11□□□□□ -0.31
TOP3A-206ENST00000489131 KCNK1O00180 336 aa13.11□□□□□ -0.31
TOP3A-206ENST00000489131 DFFAO00273 331 aa13.11□□□□□ -0.31
TOP3A-206ENST00000489131 SLC9A3R1O14745 358 aaPredicted RBP13.11□□□□□ -0.31
TOP3A-206ENST00000489131 KDELR3O43731 214 aa13.11□□□□□ -0.31
TOP3A-206ENST00000489131 METTL18O95568 372 aa13.11□□□□□ -0.31
TOP3A-206ENST00000489131 MAGEA3P43357 314 aa13.11□□□□□ -0.31
TOP3A-206ENST00000489131 OXCT1P55809 520 aa13.11□□□□□ -0.31
TOP3A-206ENST00000489131 RFTN1Q14699 578 aaPredicted RBP13.11□□□□□ -0.31
TOP3A-206ENST00000489131 CASP8Q14790 479 aa13.11□□□□□ -0.31
TOP3A-206ENST00000489131 KCTD19Q17RG1 926 aaPredicted RBP13.11□□□□□ -0.31
TOP3A-206ENST00000489131 RARS2Q5T160 578 aaKnown RBP13.11□□□□□ -0.31
TOP3A-206ENST00000489131 ALG1LQ6GMV1 187 aa13.11□□□□□ -0.31
TOP3A-206ENST00000489131 ITPRIPL1Q6GPH6 555 aa13.11□□□□□ -0.31
TOP3A-206ENST00000489131 PPP1R21Q6ZMI0 780 aa13.11□□□□□ -0.31
TOP3A-206ENST00000489131 ARHGAP36Q6ZRI8 547 aa13.11□□□□□ -0.31
TOP3A-206ENST00000489131 B4GALNT4Q76KP1 1039 aa13.11□□□□□ -0.31
TOP3A-206ENST00000489131 HDXQ7Z353 690 aa13.11□□□□□ -0.31
TOP3A-206ENST00000489131 CIR1Q86X95 450 aaPredicted RBP13.11□□□□□ -0.31
TOP3A-206ENST00000489131 CFAP52Q8N1V2 620 aa13.11□□□□□ -0.31
TOP3A-206ENST00000489131 CCDC33Q8N5R6 958 aa13.11□□□□□ -0.31
TOP3A-206ENST00000489131 CNTD1Q8N815 330 aa13.11□□□□□ -0.31
TOP3A-206ENST00000489131 ZNF557Q8N988 423 aaPredicted RBP13.11□□□□□ -0.31
TOP3A-206ENST00000489131 NETO2Q8NC67 525 aa13.11□□□□□ -0.31
TOP3A-206ENST00000489131 ALG14Q96F25 216 aa13.11□□□□□ -0.31
TOP3A-206ENST00000489131 ZNF419Q96HQ0 510 aaPredicted RBP13.11□□□□□ -0.31
TOP3A-206ENST00000489131 PKNOX2Q96KN3 472 aa13.11□□□□□ -0.31
TOP3A-206ENST00000489131 ASB16Q96NS5 453 aa13.11□□□□□ -0.31
TOP3A-206ENST00000489131 TTYH1Q9H313 450 aaPredicted RBP13.11□□□□□ -0.31
TOP3A-206ENST00000489131 ETNK1Q9HBU6 452 aa13.11□□□□□ -0.31
TOP3A-206ENST00000489131 RAB6BQ9NRW1 208 aa13.11□□□□□ -0.31
TOP3A-206ENST00000489131 OR51B4Q9Y5P0 310 aa13.11□□□□□ -0.31
TOP3A-206ENST00000489131 MTCH2Q9Y6C9 303 aa13.11□□□□□ -0.31
TOP3A-206ENST00000489131 LINC01565O15544 149 aa13.1□□□□□ -0.31
TOP3A-206ENST00000489131 TMEM63AO94886 807 aa13.1□□□□□ -0.31
TOP3A-206ENST00000489131 SUN1O94901 812 aa13.1□□□□□ -0.31
TOP3A-206ENST00000489131 MLNP12872 115 aa13.1□□□□□ -0.31
TOP3A-206ENST00000489131 CD68P34810 354 aaPredicted RBP13.1□□□□□ -0.31
TOP3A-206ENST00000489131 RENBPP51606 427 aa13.1□□□□□ -0.31
TOP3A-206ENST00000489131 PLK1P53350 603 aa13.1□□□□□ -0.31
TOP3A-206ENST00000489131 SLC12A1Q13621 1099 aa13.1□□□□□ -0.31
TOP3A-206ENST00000489131 SLC14A2Q15849 920 aa13.1□□□□□ -0.31
TOP3A-206ENST00000489131 FYB2Q5VWT5 728 aa13.1□□□□□ -0.31
TOP3A-206ENST00000489131 ANKRD22Q5VYY1 191 aa13.1□□□□□ -0.31
TOP3A-206ENST00000489131 KCTD11Q693B1 232 aa13.1□□□□□ -0.31
TOP3A-206ENST00000489131 TRMT10CQ7L0Y3 403 aaKnown RBP13.1□□□□□ -0.31
TOP3A-206ENST00000489131 OR52K2Q8NGK3 314 aa13.1□□□□□ -0.31
TOP3A-206ENST00000489131 FIBINQ8TAL6 211 aa13.1□□□□□ -0.31
TOP3A-206ENST00000489131 LRRN4Q8WUT4 740 aa13.1□□□□□ -0.31
TOP3A-206ENST00000489131 FGF13Q92913 245 aa13.1□□□□□ -0.31
TOP3A-206ENST00000489131 SMARCD2Q92925 531 aa13.1□□□□□ -0.31
TOP3A-206ENST00000489131 E2F7Q96AV8 911 aa13.1□□□□□ -0.31
TOP3A-206ENST00000489131 MSLNLQ96KJ4 702 aa13.1□□□□□ -0.31
TOP3A-206ENST00000489131 LMLNQ96KR4 655 aa13.1□□□□□ -0.31
TOP3A-206ENST00000489131 FCRL5Q96RD9 977 aa13.1□□□□□ -0.31
TOP3A-206ENST00000489131 GORASP1Q9BQQ3 440 aa13.1□□□□□ -0.31
TOP3A-206ENST00000489131 SMG9Q9H0W8 520 aaKnown RBP13.1□□□□□ -0.31
TOP3A-206ENST00000489131 ATP8A1Q9Y2Q0 1164 aa13.1□□□□□ -0.31
TOP3A-206ENST00000489131 ALOX15BO15296 676 aa13.09□□□□□ -0.31
TOP3A-206ENST00000489131 ZBTB24O43167 697 aaPredicted RBP13.09□□□□□ -0.31
TOP3A-206ENST00000489131 TBL1XO60907 577 aa13.09□□□□□ -0.31
TOP3A-206ENST00000489131 TBX10O75333 385 aa13.09□□□□□ -0.31
TOP3A-206ENST00000489131 CYBBP04839 570 aa13.09□□□□□ -0.31
TOP3A-206ENST00000489131 RHOCP08134 193 aa13.09□□□□□ -0.31
TOP3A-206ENST00000489131 ACVRL1P37023 503 aa13.09□□□□□ -0.31
TOP3A-206ENST00000489131 BASP1P80723 227 aaKnown RBP13.09□□□□□ -0.31
TOP3A-206ENST00000489131 DHX9Q08211 1270 aaKnown RBP13.09□□□□□ -0.31
TOP3A-206ENST00000489131 ARMC3Q5W041 872 aa13.09□□□□□ -0.31
TOP3A-206ENST00000489131 PID1Q7Z2X4 250 aa13.09□□□□□ -0.31
TOP3A-206ENST00000489131 IQCKQ8N0W5 287 aa13.09□□□□□ -0.31
TOP3A-206ENST00000489131 DCAF4L2Q8NA75 395 aa13.09□□□□□ -0.31
TOP3A-206ENST00000489131 DEPDC1BQ8WUY9 529 aa13.09□□□□□ -0.31
TOP3A-206ENST00000489131 TADA1Q96BN2 335 aa13.09□□□□□ -0.31
TOP3A-206ENST00000489131 LRRC39Q96DD0 335 aa13.09□□□□□ -0.31
TOP3A-206ENST00000489131 PABPC5Q96DU9 382 aaKnown RBP13.09□□□□□ -0.31
TOP3A-206ENST00000489131 SLC2A11Q9BYW1 496 aa13.09□□□□□ -0.31
TOP3A-206ENST00000489131 EPB41L4BQ9H329 900 aa13.09□□□□□ -0.31
TOP3A-206ENST00000489131 PABPC3Q9H361 631 aaKnown RBP13.09□□□□□ -0.31
TOP3A-206ENST00000489131 IGFLR1Q9H665 355 aa13.09□□□□□ -0.31
TOP3A-206ENST00000489131 SP110Q9HB58 689 aa13.09□□□□□ -0.31
TOP3A-206ENST00000489131 XAB2Q9HCS7 855 aaKnown RBP13.09□□□□□ -0.31
TOP3A-206ENST00000489131 KLHL8Q9P2G9 620 aaPredicted RBP13.09□□□□□ -0.31
TOP3A-206ENST00000489131 CDH7Q9ULB5 785 aa13.09□□□□□ -0.31
TOP3A-206ENST00000489131 HPCAL4Q9UM19 191 aa13.09□□□□□ -0.31
TOP3A-206ENST00000489131 A0A0D9SEW6 157 aa13.08□□□□□ -0.32
TOP3A-206ENST00000489131 TCRBV7S3A2A0A539 114 aa13.08□□□□□ -0.32
TOP3A-206ENST00000489131 J3KR12 359 aa13.08□□□□□ -0.32
TOP3A-206ENST00000489131 TRDMT1O14717 391 aaKnown RBP13.08□□□□□ -0.32
TOP3A-206ENST00000489131 PSMD3O43242 534 aa13.08□□□□□ -0.32
TOP3A-206ENST00000489131 TSPAN3O60637 253 aa13.08□□□□□ -0.32
TOP3A-206ENST00000489131 ZMPSTE24O75844 475 aa13.08□□□□□ -0.32
TOP3A-206ENST00000489131 SASH3O75995 380 aa13.08□□□□□ -0.32
TOP3A-206ENST00000489131 AP2A1O95782 977 aa13.08□□□□□ -0.32
TOP3A-206ENST00000489131 JCHAINP01591 159 aa13.08□□□□□ -0.32
TOP3A-206ENST00000489131 NUDT17P0C025 328 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms