RNA–Protein interactions for RNA: ENST00000489130.2

SRRM1-216, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 2

Gene SRRM1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-216ENST00000489130 PCDHGB2Q9Y5G2 931 aa12.88□□□□□ -0.35
SRRM1-216ENST00000489130 A0A0D9SEW6 157 aa12.87□□□□□ -0.35
SRRM1-216ENST00000489130 C2CD4BA6NLJ0 364 aa12.87□□□□□ -0.35
SRRM1-216ENST00000489130 MCF2LO15068 1137 aa12.87□□□□□ -0.35
SRRM1-216ENST00000489130 SLC7A4O43246 635 aa12.87□□□□□ -0.35
SRRM1-216ENST00000489130 SNAP91O60641 907 aa12.87□□□□□ -0.35
SRRM1-216ENST00000489130 CBFA2T3O75081 653 aa12.87□□□□□ -0.35
SRRM1-216ENST00000489130 TRIM16O95361 564 aa12.87□□□□□ -0.35
SRRM1-216ENST00000489130 TOP3BO95985 862 aaKnown RBP12.87□□□□□ -0.35
SRRM1-216ENST00000489130 MT-CO1P00395 513 aa12.87□□□□□ -0.35
SRRM1-216ENST00000489130 ATP1A3P13637 1013 aa12.87□□□□□ -0.35
SRRM1-216ENST00000489130 CDK11BP21127 795 aaKnown RBP12.87□□□□□ -0.35
SRRM1-216ENST00000489130 OR1E1P30953 314 aa12.87□□□□□ -0.35
SRRM1-216ENST00000489130 PTPN9P43378 593 aa12.87□□□□□ -0.35
SRRM1-216ENST00000489130 NSFP46459 744 aaKnown RBP12.87□□□□□ -0.35
SRRM1-216ENST00000489130 CCR5P51681 352 aa12.87□□□□□ -0.35
SRRM1-216ENST00000489130 CLCN6P51797 869 aa12.87□□□□□ -0.35
SRRM1-216ENST00000489130 METAP1P53582 386 aa12.87□□□□□ -0.35
SRRM1-216ENST00000489130 ATP11AP98196 1134 aa12.87□□□□□ -0.35
SRRM1-216ENST00000489130 NRG1Q02297 640 aaPredicted RBP12.87□□□□□ -0.35
SRRM1-216ENST00000489130 CLEC16AQ2KHT3 1053 aa12.87□□□□□ -0.35
SRRM1-216ENST00000489130 CCDC14Q49A88 953 aa12.87□□□□□ -0.35
SRRM1-216ENST00000489130 ACCSLQ4AC99 568 aa12.87□□□□□ -0.35
SRRM1-216ENST00000489130 FAM46CQ5VWP2 391 aa12.87□□□□□ -0.35
SRRM1-216ENST00000489130 LAYNQ6UX15 382 aa12.87□□□□□ -0.35
SRRM1-216ENST00000489130 ZNF783Q6ZMS7 281 aa12.87□□□□□ -0.35
SRRM1-216ENST00000489130 TFAP2DQ7Z6R9 452 aa12.87□□□□□ -0.35
SRRM1-216ENST00000489130 PHF13Q86YI8 300 aaPredicted RBP12.87□□□□□ -0.35
SRRM1-216ENST00000489130 AOPEPQ8N6M6 819 aa12.87□□□□□ -0.35
SRRM1-216ENST00000489130 OR14C36Q8NHC7 312 aa12.87□□□□□ -0.35
SRRM1-216ENST00000489130 JOSD2Q8TAC2 188 aa12.87□□□□□ -0.35
SRRM1-216ENST00000489130 RXFP2Q8WXD0 754 aa12.87□□□□□ -0.35
SRRM1-216ENST00000489130 SLC6A18Q96N87 628 aa12.87□□□□□ -0.35
SRRM1-216ENST00000489130 SCNM1Q9BWG6 230 aa12.87□□□□□ -0.35
SRRM1-216ENST00000489130 ZYG11BQ9C0D3 744 aa12.87□□□□□ -0.35
SRRM1-216ENST00000489130 KDM4CQ9H3R0 1056 aa12.87□□□□□ -0.35
SRRM1-216ENST00000489130 EBF2Q9HAK2 575 aa12.87□□□□□ -0.35
SRRM1-216ENST00000489130 PPARGC1AQ9UBK2 798 aaKnown RBP12.87□□□□□ -0.35
SRRM1-216ENST00000489130 VPS51Q9UID3 782 aa12.87□□□□□ -0.35
SRRM1-216ENST00000489130 PCOLCE2Q9UKZ9 415 aa12.87□□□□□ -0.35
SRRM1-216ENST00000489130 SNX11Q9Y5W9 270 aa12.87□□□□□ -0.35
SRRM1-216ENST00000489130 TPRP12270 2363 aaKnown RBP12.86□□□□□ -0.35
SRRM1-216ENST00000489130 ILVBLA1L0T0 632 aa12.86□□□□□ -0.35
SRRM1-216ENST00000489130 C1QTNF3-AMACRE9PGA6 284 aa12.86□□□□□ -0.35
SRRM1-216ENST00000489130 VILLO15195 856 aa12.86□□□□□ -0.35
SRRM1-216ENST00000489130 LATO43561 262 aa12.86□□□□□ -0.35
SRRM1-216ENST00000489130 SRGAP2O75044 1071 aa12.86□□□□□ -0.35
SRRM1-216ENST00000489130 SPINK2P20155 84 aa12.86□□□□□ -0.35
SRRM1-216ENST00000489130 SDC4P31431 198 aa12.86□□□□□ -0.35
SRRM1-216ENST00000489130 ADRA1BP35368 520 aa12.86□□□□□ -0.35
SRRM1-216ENST00000489130 CTSKP43235 329 aa12.86□□□□□ -0.35
SRRM1-216ENST00000489130 TRIP6Q15654 476 aaKnown RBP12.86□□□□□ -0.35
SRRM1-216ENST00000489130 ST3GAL2Q16842 350 aa12.86□□□□□ -0.35
SRRM1-216ENST00000489130 CDO1Q16878 200 aa12.86□□□□□ -0.35
SRRM1-216ENST00000489130 ZNF423Q2M1K9 1284 aa12.86□□□□□ -0.35
SRRM1-216ENST00000489130 C15orf59Q2T9L4 293 aaPredicted RBP12.86□□□□□ -0.35
SRRM1-216ENST00000489130 ARL13BQ3SXY8 428 aa12.86□□□□□ -0.35
SRRM1-216ENST00000489130 RAB6CQ53S08 254 aa12.86□□□□□ -0.35
SRRM1-216ENST00000489130 KCNT1Q5JUK3 1230 aa12.86□□□□□ -0.35
SRRM1-216ENST00000489130 MANEALQ5VSG8 457 aa12.86□□□□□ -0.35
SRRM1-216ENST00000489130 AGBL4Q5VU57 503 aa12.86□□□□□ -0.35
SRRM1-216ENST00000489130 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.86□□□□□ -0.35
SRRM1-216ENST00000489130 MON1BQ7L1V2 547 aa12.86□□□□□ -0.35
SRRM1-216ENST00000489130 STRADAQ7RTN6 431 aa12.86□□□□□ -0.35
SRRM1-216ENST00000489130 ADAT2Q7Z6V5 191 aaKnown RBP12.86□□□□□ -0.35
SRRM1-216ENST00000489130 PHLDB2Q86SQ0 1253 aa12.86□□□□□ -0.35
SRRM1-216ENST00000489130 GLRX5Q86SX6 157 aa12.86□□□□□ -0.35
SRRM1-216ENST00000489130 ATP11CQ8NB49 1132 aa12.86□□□□□ -0.35
SRRM1-216ENST00000489130 C3orf20Q8ND61 904 aa12.86□□□□□ -0.35
SRRM1-216ENST00000489130 BAHD1Q8TBE0 780 aaPredicted RBP12.86□□□□□ -0.35
SRRM1-216ENST00000489130 CENPIQ92674 756 aaPredicted RBP12.86□□□□□ -0.35
SRRM1-216ENST00000489130 BPIFA3Q9BQP9 254 aa12.86□□□□□ -0.35
SRRM1-216ENST00000489130 ACE2Q9BYF1 805 aaPredicted RBP12.86□□□□□ -0.35
SRRM1-216ENST00000489130 NAT10Q9H0A0 1025 aaKnown RBP12.86□□□□□ -0.35
SRRM1-216ENST00000489130 RAB6CQ9H0N0 254 aa12.86□□□□□ -0.35
SRRM1-216ENST00000489130 ADAM22Q9P0K1 906 aa12.86□□□□□ -0.35
SRRM1-216ENST00000489130 PCDHB9Q9Y5E1 797 aa12.86□□□□□ -0.35
SRRM1-216ENST00000489130 SPEGQ15772 3267 aa12.86□□□□□ -0.35
SRRM1-216ENST00000489130 ZFHX4Q86UP3 3567 aa12.85□□□□□ -0.35
SRRM1-216ENST00000489130 WDFY3Q8IZQ1 3526 aa12.85□□□□□ -0.35
SRRM1-216ENST00000489130 K7ERQ8 282 aa12.85□□□□□ -0.35
SRRM1-216ENST00000489130 FLRT2O43155 660 aa12.85□□□□□ -0.35
SRRM1-216ENST00000489130 PLRG1O43660 514 aaKnown RBP12.85□□□□□ -0.35
SRRM1-216ENST00000489130 HYAL3O43820 417 aaPredicted RBP12.85□□□□□ -0.35
SRRM1-216ENST00000489130 GJB6O95452 261 aa12.85□□□□□ -0.35
SRRM1-216ENST00000489130 CALB1P05937 261 aa12.85□□□□□ -0.35
SRRM1-216ENST00000489130 KRT3P12035 628 aa12.85□□□□□ -0.35
SRRM1-216ENST00000489130 RRM1P23921 792 aa12.85□□□□□ -0.35
SRRM1-216ENST00000489130 HDAC4P56524 1084 aa12.85□□□□□ -0.35
SRRM1-216ENST00000489130 PPP2CBP62714 309 aa12.85□□□□□ -0.35
SRRM1-216ENST00000489130 PPP2CAP67775 309 aa12.85□□□□□ -0.35
SRRM1-216ENST00000489130 CNTN1Q12860 1018 aa12.85□□□□□ -0.35
SRRM1-216ENST00000489130 ANO6Q4KMQ2 910 aa12.85□□□□□ -0.35
SRRM1-216ENST00000489130 OR7D4Q8NG98 312 aa12.85□□□□□ -0.35
SRRM1-216ENST00000489130 OR2A12Q8NGT7 310 aa12.85□□□□□ -0.35
SRRM1-216ENST00000489130 PIP4K2CQ8TBX8 421 aa12.85□□□□□ -0.35
SRRM1-216ENST00000489130 CCDC114Q96M63 670 aa12.85□□□□□ -0.35
SRRM1-216ENST00000489130 TMEM121BQ9BXQ6 578 aaPredicted RBP12.85□□□□□ -0.35
SRRM1-216ENST00000489130 OSBPL2Q9H1P3 480 aa12.85□□□□□ -0.35
SRRM1-216ENST00000489130 RETREG1Q9H6L5 497 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms