RNA–Protein interactions for RNA: ENST00000489053.1

HDAC6-232, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-232ENST00000489053 CD27P26842 260 aa9.35□□□□□ -0.91
HDAC6-232ENST00000489053 RFC1P35251 1148 aaPredicted RBP9.35□□□□□ -0.91
HDAC6-232ENST00000489053 MAPKAPK2P49137 400 aa9.35□□□□□ -0.91
HDAC6-232ENST00000489053 IRAK1P51617 712 aa9.35□□□□□ -0.91
HDAC6-232ENST00000489053 GNA12Q03113 381 aa9.35□□□□□ -0.91
HDAC6-232ENST00000489053 ZNF252P-AS1Q0IIN9 211 aa9.35□□□□□ -0.91
HDAC6-232ENST00000489053 GRIK2Q13002 908 aa9.35□□□□□ -0.91
HDAC6-232ENST00000489053 SUZ12Q15022 739 aaKnown RBP9.35□□□□□ -0.91
HDAC6-232ENST00000489053 POLD3Q15054 466 aaPredicted RBP9.35□□□□□ -0.91
HDAC6-232ENST00000489053 INAVAQ3KP66 663 aa9.35□□□□□ -0.91
HDAC6-232ENST00000489053 POM121L1PQ3SYA9 428 aa9.35□□□□□ -0.91
HDAC6-232ENST00000489053 ALFQ53S48 1182 aa9.35□□□□□ -0.91
HDAC6-232ENST00000489053 OTUD1Q5VV17 481 aaPredicted RBP9.35□□□□□ -0.91
HDAC6-232ENST00000489053 KIAA0895LQ68EN5 471 aa9.35□□□□□ -0.91
HDAC6-232ENST00000489053 MON1BQ7L1V2 547 aa9.35□□□□□ -0.91
HDAC6-232ENST00000489053 LUZP1Q86V48 1076 aa9.35□□□□□ -0.91
HDAC6-232ENST00000489053 DEFB124Q8NES8 71 aa9.35□□□□□ -0.91
HDAC6-232ENST00000489053 OR2T34Q8NGX1 318 aa9.35□□□□□ -0.91
HDAC6-232ENST00000489053 JOSD2Q8TAC2 188 aa9.35□□□□□ -0.91
HDAC6-232ENST00000489053 SETD7Q8WTS6 366 aaKnown RBP9.35□□□□□ -0.91
HDAC6-232ENST00000489053 DNASE2BQ8WZ79 361 aa9.35□□□□□ -0.91
HDAC6-232ENST00000489053 IQCDQ96DY2 449 aa9.35□□□□□ -0.91
HDAC6-232ENST00000489053 PCDHB18PQ96TA0 734 aa9.35□□□□□ -0.91
HDAC6-232ENST00000489053 CNPY3Q9BT09 278 aa9.35□□□□□ -0.91
HDAC6-232ENST00000489053 ACE2Q9BYF1 805 aaPredicted RBP9.35□□□□□ -0.91
HDAC6-232ENST00000489053 RETREG1Q9H6L5 497 aa9.35□□□□□ -0.91
HDAC6-232ENST00000489053 CBX8Q9HC52 389 aa9.35□□□□□ -0.91
HDAC6-232ENST00000489053 CAPN10Q9HC96 672 aa9.35□□□□□ -0.91
HDAC6-232ENST00000489053 FSCN3Q9NQT6 498 aa9.35□□□□□ -0.91
HDAC6-232ENST00000489053 TMPRSS4Q9NRS4 437 aa9.35□□□□□ -0.91
HDAC6-232ENST00000489053 VPS51Q9UID3 782 aa9.35□□□□□ -0.91
HDAC6-232ENST00000489053 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.35□□□□□ -0.91
HDAC6-232ENST00000489053 SCINQ9Y6U3 715 aa9.35□□□□□ -0.91
HDAC6-232ENST00000489053 ABCA7Q8IZY2 2146 aa9.35□□□□□ -0.91
HDAC6-232ENST00000489053 MYO18AQ92614 2054 aaKnown RBP9.35□□□□□ -0.91
HDAC6-232ENST00000489053 THADAQ6YHU6 1953 aa9.34□□□□□ -0.91
HDAC6-232ENST00000489053 GON4LQ3T8J9 2241 aa9.34□□□□□ -0.91
HDAC6-232ENST00000489053 DRGXA6NNA5 263 aa9.34□□□□□ -0.91
HDAC6-232ENST00000489053 CBFA2T2O43439 604 aa9.34□□□□□ -0.91
HDAC6-232ENST00000489053 ATP9BO43861 1147 aa9.34□□□□□ -0.91
HDAC6-232ENST00000489053 CREB3O43889 395 aa9.34□□□□□ -0.91
HDAC6-232ENST00000489053 PRPSAP2O60256 369 aa9.34□□□□□ -0.91
HDAC6-232ENST00000489053 SNAP91O60641 907 aa9.34□□□□□ -0.91
HDAC6-232ENST00000489053 RNF8O76064 485 aa9.34□□□□□ -0.91
HDAC6-232ENST00000489053 ENDOD1O94919 500 aa9.34□□□□□ -0.91
HDAC6-232ENST00000489053 ADRB1P08588 477 aa9.34□□□□□ -0.91
HDAC6-232ENST00000489053 CEACAM1P13688 526 aa9.34□□□□□ -0.91
HDAC6-232ENST00000489053 RHOQP17081 205 aa9.34□□□□□ -0.91
HDAC6-232ENST00000489053 CSRP1P21291 193 aaKnown RBP9.34□□□□□ -0.91
HDAC6-232ENST00000489053 RRM1P23921 792 aa9.34□□□□□ -0.91
HDAC6-232ENST00000489053 EPHB2P29323 1055 aa9.34□□□□□ -0.91
HDAC6-232ENST00000489053 CSNK1EP49674 416 aaKnown RBP9.34□□□□□ -0.91
HDAC6-232ENST00000489053 ZNF143P52747 638 aaPredicted RBP9.34□□□□□ -0.91
HDAC6-232ENST00000489053 AIF1P55008 147 aa9.34□□□□□ -0.91
HDAC6-232ENST00000489053 FANCCQ00597 558 aa9.34□□□□□ -0.91
HDAC6-232ENST00000489053 SLC20A2Q08357 652 aa9.34□□□□□ -0.91
HDAC6-232ENST00000489053 HNRNPDQ14103 355 aaKnown RBP9.34□□□□□ -0.91
HDAC6-232ENST00000489053 NFKBIBQ15653 356 aa9.34□□□□□ -0.91
HDAC6-232ENST00000489053 TSR1Q2NL82 804 aaKnown RBP9.34□□□□□ -0.91
HDAC6-232ENST00000489053 ZSCAN23Q3MJ62 389 aa9.34□□□□□ -0.91
HDAC6-232ENST00000489053 C5orf22Q49AR2 442 aa9.34□□□□□ -0.91
HDAC6-232ENST00000489053 NCEH1Q6PIU2 408 aa9.34□□□□□ -0.91
HDAC6-232ENST00000489053 WDR59Q6PJI9 974 aa9.34□□□□□ -0.91
HDAC6-232ENST00000489053 LINGO4Q6UY18 593 aa9.34□□□□□ -0.91
HDAC6-232ENST00000489053 APTXQ7Z2E3 356 aaKnown RBP9.34□□□□□ -0.91
HDAC6-232ENST00000489053 TMC6Q7Z403 805 aa9.34□□□□□ -0.91
HDAC6-232ENST00000489053 PRPF39Q86UA1 669 aaKnown RBP9.34□□□□□ -0.91
HDAC6-232ENST00000489053 MCOLN2Q8IZK6 566 aa9.34□□□□□ -0.91
HDAC6-232ENST00000489053 SH2D3CQ8N5H7 860 aa9.34□□□□□ -0.91
HDAC6-232ENST00000489053 PAF1Q8N7H5 531 aa9.34□□□□□ -0.91
HDAC6-232ENST00000489053 OR7D4Q8NG98 312 aa9.34□□□□□ -0.91
HDAC6-232ENST00000489053 GRIN3AQ8TCU5 1115 aa9.34□□□□□ -0.91
HDAC6-232ENST00000489053 CPLX3Q8WVH0 158 aa9.34□□□□□ -0.91
HDAC6-232ENST00000489053 BIRC7Q96CA5 298 aa9.34□□□□□ -0.91
HDAC6-232ENST00000489053 ZNF653Q96CK0 615 aa9.34□□□□□ -0.91
HDAC6-232ENST00000489053 VCPIP1Q96JH7 1222 aa9.34□□□□□ -0.91
HDAC6-232ENST00000489053 EDEM3Q9BZQ6 932 aa9.34□□□□□ -0.91
HDAC6-232ENST00000489053 OSBPL2Q9H1P3 480 aa9.34□□□□□ -0.91
HDAC6-232ENST00000489053 NEUROG2Q9H2A3 272 aa9.34□□□□□ -0.91
HDAC6-232ENST00000489053 HSD3B7Q9H2F3 369 aa9.34□□□□□ -0.91
HDAC6-232ENST00000489053 HAUS4Q9H6D7 363 aa9.34□□□□□ -0.91
HDAC6-232ENST00000489053 GAREM1Q9H706 876 aa9.34□□□□□ -0.91
HDAC6-232ENST00000489053 CATSPERBQ9H7T0 1116 aa9.34□□□□□ -0.91
HDAC6-232ENST00000489053 MRPL47Q9HD33 250 aaKnown RBP9.34□□□□□ -0.91
HDAC6-232ENST00000489053 PPARGC1AQ9UBK2 798 aaKnown RBP9.34□□□□□ -0.91
HDAC6-232ENST00000489053 DNAI1Q9UI46 699 aa9.34□□□□□ -0.91
HDAC6-232ENST00000489053 BZW2Q9Y6E2 419 aaKnown RBP9.34□□□□□ -0.91
HDAC6-232ENST00000489053 RALGAPA1Q6GYQ0 2036 aa9.34□□□□□ -0.91
HDAC6-232ENST00000489053 ACACBO00763 2458 aa9.33□□□□□ -0.92
HDAC6-232ENST00000489053 IGLV3-10A0A075B6K4 115 aa9.33□□□□□ -0.92
HDAC6-232ENST00000489053 A0A0D9SEW6 157 aa9.33□□□□□ -0.92
HDAC6-232ENST00000489053 A0A1B0GVT2 93 aa9.33□□□□□ -0.92
HDAC6-232ENST00000489053 CDX4O14627 284 aaPredicted RBP9.33□□□□□ -0.92
HDAC6-232ENST00000489053 MCF2LO15068 1137 aa9.33□□□□□ -0.92
HDAC6-232ENST00000489053 FGF10O15520 208 aaPredicted RBP9.33□□□□□ -0.92
HDAC6-232ENST00000489053 SLC7A4O43246 635 aa9.33□□□□□ -0.92
HDAC6-232ENST00000489053 CCP110O43303 1012 aa9.33□□□□□ -0.92
HDAC6-232ENST00000489053 MYBL1P10243 752 aa9.33□□□□□ -0.92
HDAC6-232ENST00000489053 SRCP12931 536 aa9.33□□□□□ -0.92
HDAC6-232ENST00000489053 VAV1P15498 845 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms