RNA–Protein interactions for RNA: ENST00000489028.1

RFC4-213, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-213ENST00000489028 SELENOVP59797 346 aa4.01□□□□□ -1.77
RFC4-213ENST00000489028 ZNF484Q5JVG2 852 aa4.01□□□□□ -1.77
RFC4-213ENST00000489028 TMEM71Q6P5X7 295 aa4.01□□□□□ -1.77
RFC4-213ENST00000489028 AAGABQ6PD74 315 aa4.01□□□□□ -1.77
RFC4-213ENST00000489028 MEPCEQ7L2J0 689 aaKnown RBP4.01□□□□□ -1.77
RFC4-213ENST00000489028 BHLHA9Q7RTU4 235 aa4.01□□□□□ -1.77
RFC4-213ENST00000489028 TRIM74Q86UV6 250 aa4.01□□□□□ -1.77
RFC4-213ENST00000489028 TRIM73Q86UV7 250 aa4.01□□□□□ -1.77
RFC4-213ENST00000489028 SUGP1Q8IWZ8 645 aaKnown RBP4.01□□□□□ -1.77
RFC4-213ENST00000489028 ENAHQ8N8S7 591 aaPredicted RBP4.01□□□□□ -1.77
RFC4-213ENST00000489028 LRRC57Q8N9N7 239 aa4.01□□□□□ -1.77
RFC4-213ENST00000489028 C7orf57Q8NEG2 295 aa4.01□□□□□ -1.77
RFC4-213ENST00000489028 OR6Y1Q8NGX8 325 aa4.01□□□□□ -1.77
RFC4-213ENST00000489028 OIT3Q8WWZ8 545 aa4.01□□□□□ -1.77
RFC4-213ENST00000489028 KTI12Q96EK9 354 aaPredicted RBP4.01□□□□□ -1.77
RFC4-213ENST00000489028 RPS6KC1Q96S38 1066 aa4.01□□□□□ -1.77
RFC4-213ENST00000489028 POLDIP3Q9BY77 421 aaKnown RBP4.01□□□□□ -1.77
RFC4-213ENST00000489028 B3GNT4Q9C0J1 378 aa4.01□□□□□ -1.77
RFC4-213ENST00000489028 TWSG1Q9GZX9 223 aa4.01□□□□□ -1.77
RFC4-213ENST00000489028 RBM38Q9H0Z9 239 aaKnown RBP4.01□□□□□ -1.77
RFC4-213ENST00000489028 PTPRHQ9HD43 1115 aa4.01□□□□□ -1.77
RFC4-213ENST00000489028 TLR8Q9NR97 1041 aaKnown RBP4.01□□□□□ -1.77
RFC4-213ENST00000489028 RNF146Q9NTX7 359 aa4.01□□□□□ -1.77
RFC4-213ENST00000489028 ZDHHC7Q9NXF8 308 aa4.01□□□□□ -1.77
RFC4-213ENST00000489028 PLEKHB1Q9UF11 243 aaPredicted RBP4.01□□□□□ -1.77
RFC4-213ENST00000489028 BAG5Q9UL15 447 aa4.01□□□□□ -1.77
RFC4-213ENST00000489028 RPS10-NUDT3A0A1W2PQS6 291 aa4□□□□□ -1.77
RFC4-213ENST00000489028 GAGE12JA6NER3 117 aa4□□□□□ -1.77
RFC4-213ENST00000489028 B9A039 149 aa4□□□□□ -1.77
RFC4-213ENST00000489028 I6L893 689 aaPredicted RBP4□□□□□ -1.77
RFC4-213ENST00000489028 GTPBP1O00178 669 aaKnown RBP4□□□□□ -1.77
RFC4-213ENST00000489028 SYN3O14994 580 aa4□□□□□ -1.77
RFC4-213ENST00000489028 LDHAP00338 332 aaKnown RBP4□□□□□ -1.77
RFC4-213ENST00000489028 LCATP04180 440 aa4□□□□□ -1.77
RFC4-213ENST00000489028 FCGR2AP12318 317 aa4□□□□□ -1.77
RFC4-213ENST00000489028 PLA2G2AP14555 144 aa4□□□□□ -1.77
RFC4-213ENST00000489028 GSTM2P28161 218 aa4□□□□□ -1.77
RFC4-213ENST00000489028 ADD2P35612 726 aa4□□□□□ -1.77
RFC4-213ENST00000489028 CDKN2AP42771 156 aaKnown RBP4□□□□□ -1.77
RFC4-213ENST00000489028 PGGT1BP53609 377 aa4□□□□□ -1.77
RFC4-213ENST00000489028 OAZ1P54368 228 aa4□□□□□ -1.77
RFC4-213ENST00000489028 C5orf22Q49AR2 442 aa4□□□□□ -1.77
RFC4-213ENST00000489028 RUSC1-AS1Q66K80 236 aa4□□□□□ -1.77
RFC4-213ENST00000489028 LVRNQ6Q4G3 990 aa4□□□□□ -1.77
RFC4-213ENST00000489028 GALNT7Q86SF2 657 aa4□□□□□ -1.77
RFC4-213ENST00000489028 BRSK2Q8IWQ3 736 aa4□□□□□ -1.77
RFC4-213ENST00000489028 FAM217AQ8IXS0 508 aa4□□□□□ -1.77
RFC4-213ENST00000489028 LINS1Q8NG48 757 aa4□□□□□ -1.77
RFC4-213ENST00000489028 ADAMTS15Q8TE58 950 aa4□□□□□ -1.77
RFC4-213ENST00000489028 TRAPPC12Q8WVT3 735 aa4□□□□□ -1.77
RFC4-213ENST00000489028 GOLGA1Q92805 767 aa4□□□□□ -1.77
RFC4-213ENST00000489028 ZNF479Q96JC4 524 aa4□□□□□ -1.77
RFC4-213ENST00000489028 LYZL4Q96KX0 146 aa4□□□□□ -1.77
RFC4-213ENST00000489028 ARPC5LQ9BPX5 153 aa4□□□□□ -1.77
RFC4-213ENST00000489028 KRTAP1-5Q9BYS1 174 aa4□□□□□ -1.77
RFC4-213ENST00000489028 MYLK2Q9H1R3 596 aa4□□□□□ -1.77
RFC4-213ENST00000489028 PLAC1Q9HBJ0 212 aa4□□□□□ -1.77
RFC4-213ENST00000489028 TMLHEQ9NVH6 421 aa4□□□□□ -1.77
RFC4-213ENST00000489028 THAP1Q9NVV9 213 aa4□□□□□ -1.77
RFC4-213ENST00000489028 ZNF580Q9UK33 172 aa4□□□□□ -1.77
RFC4-213ENST00000489028 DDAH2O95865 285 aa3.99□□□□□ -1.77
RFC4-213ENST00000489028 TFRCP02786 760 aaKnown RBP3.99□□□□□ -1.77
RFC4-213ENST00000489028 UNGP13051 313 aaPredicted RBP3.99□□□□□ -1.77
RFC4-213ENST00000489028 CYP4B1P13584 511 aa3.99□□□□□ -1.77
RFC4-213ENST00000489028 CHRNB2P17787 502 aa3.99□□□□□ -1.77
RFC4-213ENST00000489028 TKTP29401 623 aaKnown RBP3.99□□□□□ -1.77
RFC4-213ENST00000489028 PNPLA4P41247 253 aa3.99□□□□□ -1.77
RFC4-213ENST00000489028 RFX2P48378 723 aa3.99□□□□□ -1.77
RFC4-213ENST00000489028 RASSF2P50749 326 aa3.99□□□□□ -1.77
RFC4-213ENST00000489028 RBM5P52756 815 aaKnown RBP eCLIP3.99□□□□□ -1.77
RFC4-213ENST00000489028 MVDP53602 400 aa3.99□□□□□ -1.77
RFC4-213ENST00000489028 ERV3-1Q14264 604 aa3.99□□□□□ -1.77
RFC4-213ENST00000489028 DUSP6Q16828 381 aa3.99□□□□□ -1.77
RFC4-213ENST00000489028 SYTL3Q4VX76 610 aa3.99□□□□□ -1.77
RFC4-213ENST00000489028 UBAP2Q5T6F2 1119 aaKnown RBP3.99□□□□□ -1.77
RFC4-213ENST00000489028 CRELD2Q6UXH1 353 aaPredicted RBP3.99□□□□□ -1.77
RFC4-213ENST00000489028 Q6ZTK2 550 aa3.99□□□□□ -1.77
RFC4-213ENST00000489028 IGFN1Q86VF2 1251 aa3.99□□□□□ -1.77
RFC4-213ENST00000489028 MOGAT3Q86VF5 341 aa3.99□□□□□ -1.77
RFC4-213ENST00000489028 GALNT15Q8N3T1 639 aa3.99□□□□□ -1.77
RFC4-213ENST00000489028 FSIP1Q8NA03 581 aa3.99□□□□□ -1.77
RFC4-213ENST00000489028 GABPB2Q8TAK5 448 aaPredicted RBP3.99□□□□□ -1.77
RFC4-213ENST00000489028 THAP4Q8WY91 577 aa3.99□□□□□ -1.77
RFC4-213ENST00000489028 RUBCNQ92622 972 aa3.99□□□□□ -1.77
RFC4-213ENST00000489028 MIB2Q96AX9 1013 aa3.99□□□□□ -1.77
RFC4-213ENST00000489028 LTV1Q96GA3 475 aaPredicted RBP3.99□□□□□ -1.77
RFC4-213ENST00000489028 FRG2BQ96QU4 278 aa3.99□□□□□ -1.77
RFC4-213ENST00000489028 HIPK2Q9H2X6 1198 aa3.99□□□□□ -1.77
RFC4-213ENST00000489028 CHODLQ9H9P2 273 aa3.99□□□□□ -1.77
RFC4-213ENST00000489028 SAYSD1Q9NPB0 183 aa3.99□□□□□ -1.77
RFC4-213ENST00000489028 KRCC1Q9NPI7 259 aaPredicted RBP3.99□□□□□ -1.77
RFC4-213ENST00000489028 HDAC6Q9UBN7 1215 aa3.99□□□□□ -1.77
RFC4-213ENST00000489028 PCDHA7Q9UN72 937 aa3.99□□□□□ -1.77
RFC4-213ENST00000489028 OSGIN2Q9Y236 505 aa3.99□□□□□ -1.77
RFC4-213ENST00000489028 EVPLQ92817 2033 aa3.99□□□□□ -1.77
RFC4-213ENST00000489028 A0A1B0GVT2 93 aa3.98□□□□□ -1.77
RFC4-213ENST00000489028 INAFM1C9JVW0 142 aa3.98□□□□□ -1.77
RFC4-213ENST00000489028 STMND1H3BQB6 276 aa3.98□□□□□ -1.77
RFC4-213ENST00000489028 IKBKBO14920 756 aa3.98□□□□□ -1.77
RFC4-213ENST00000489028 RGS14O43566 566 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms