RNA–Protein interactions for RNA: ENST00000488989.1

CLDN11-208, Transcript of claudin 11, humanhuman

TSL 4

Gene CLDN11, Length 600 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-208ENST00000488989 ZMPSTE24O75844 475 aa16.37■□□□□ 0.21
CLDN11-208ENST00000488989 CISD3P0C7P0 127 aa16.37■□□□□ 0.21
CLDN11-208ENST00000488989 MZF1P28698 734 aaPredicted RBP16.37■□□□□ 0.21
CLDN11-208ENST00000488989 HLA-FP30511 346 aa16.37■□□□□ 0.21
CLDN11-208ENST00000488989 GDI1P31150 447 aa16.37■□□□□ 0.21
CLDN11-208ENST00000488989 CSKP41240 450 aa16.37■□□□□ 0.21
CLDN11-208ENST00000488989 IFI35P80217 286 aaPredicted RBP16.37■□□□□ 0.21
CLDN11-208ENST00000488989 AP1B1Q10567 949 aa16.37■□□□□ 0.21
CLDN11-208ENST00000488989 WASHC5Q12768 1159 aa16.37■□□□□ 0.21
CLDN11-208ENST00000488989 NR1H3Q13133 447 aa16.37■□□□□ 0.21
CLDN11-208ENST00000488989 PTK6Q13882 451 aa16.37■□□□□ 0.21
CLDN11-208ENST00000488989 P3H1Q32P28 736 aa16.37■□□□□ 0.21
CLDN11-208ENST00000488989 TEX35Q5T0J7 233 aa16.37■□□□□ 0.21
CLDN11-208ENST00000488989 ASTLQ6HA08 431 aaPredicted RBP16.37■□□□□ 0.21
CLDN11-208ENST00000488989 B4GALNT4Q76KP1 1039 aa16.37■□□□□ 0.21
CLDN11-208ENST00000488989 DCAF4L2Q8NA75 395 aa16.37■□□□□ 0.21
CLDN11-208ENST00000488989 LRRN4Q8WUT4 740 aa16.37■□□□□ 0.21
CLDN11-208ENST00000488989 RSAD2Q8WXG1 361 aa16.37■□□□□ 0.21
CLDN11-208ENST00000488989 ZNF599Q96NL3 588 aa16.37■□□□□ 0.21
CLDN11-208ENST00000488989 XPO6Q96QU8 1125 aaKnown RBP16.37■□□□□ 0.21
CLDN11-208ENST00000488989 IL12RB2Q99665 862 aa16.37■□□□□ 0.21
CLDN11-208ENST00000488989 PCDH9Q9HC56 1237 aa16.37■□□□□ 0.21
CLDN11-208ENST00000488989 TRPV5Q9NQA5 729 aa16.37■□□□□ 0.21
CLDN11-208ENST00000488989 SLC27A6Q9Y2P4 619 aa16.37■□□□□ 0.21
CLDN11-208ENST00000488989 PRUNE2Q8WUY3 3088 aa16.36■□□□□ 0.21
CLDN11-208ENST00000488989 SGK1O00141 431 aa16.36■□□□□ 0.21
CLDN11-208ENST00000488989 GCATO75600 419 aa16.36■□□□□ 0.21
CLDN11-208ENST00000488989 SP100P23497 879 aaPredicted RBP16.36■□□□□ 0.21
CLDN11-208ENST00000488989 CD70P32970 193 aa16.36■□□□□ 0.21
CLDN11-208ENST00000488989 CLCN6P51797 869 aa16.36■□□□□ 0.21
CLDN11-208ENST00000488989 TNK2Q07912 1038 aa16.36■□□□□ 0.21
CLDN11-208ENST00000488989 HNRNPDQ14103 355 aaKnown RBP16.36■□□□□ 0.21
CLDN11-208ENST00000488989 DMC1Q14565 340 aa16.36■□□□□ 0.21
CLDN11-208ENST00000488989 PLEKHG6Q3KR16 790 aa16.36■□□□□ 0.21
CLDN11-208ENST00000488989 CCDC70Q6NSX1 233 aa16.36■□□□□ 0.21
CLDN11-208ENST00000488989 TEX26Q8N6G2 289 aa16.36■□□□□ 0.21
CLDN11-208ENST00000488989 FAM71DQ8N9W8 422 aa16.36■□□□□ 0.21
CLDN11-208ENST00000488989 GLIS1Q8NBF1 620 aa16.36■□□□□ 0.21
CLDN11-208ENST00000488989 MYRIPQ8NFW9 859 aa16.36■□□□□ 0.21
CLDN11-208ENST00000488989 CCHCR1Q8TD31 782 aa16.36■□□□□ 0.21
CLDN11-208ENST00000488989 SEC14L1Q92503 715 aa16.36■□□□□ 0.21
CLDN11-208ENST00000488989 VAT1Q99536 393 aa16.36■□□□□ 0.21
CLDN11-208ENST00000488989 FERMT1Q9BQL6 677 aa16.36■□□□□ 0.21
CLDN11-208ENST00000488989 MUC3BQ9H195 1237 aa16.36■□□□□ 0.21
CLDN11-208ENST00000488989 KCNK12Q9HB15 430 aa16.36■□□□□ 0.21
CLDN11-208ENST00000488989 SP110Q9HB58 689 aa16.36■□□□□ 0.21
CLDN11-208ENST00000488989 ATP13A1Q9HD20 1204 aa16.36■□□□□ 0.21
CLDN11-208ENST00000488989 INTS6Q9UL03 887 aaKnown RBP16.36■□□□□ 0.21
CLDN11-208ENST00000488989 A0A0A0MRY4 1105 aa16.35■□□□□ 0.21
CLDN11-208ENST00000488989 TARSL2A2RTX5 802 aaKnown RBP16.35■□□□□ 0.21
CLDN11-208ENST00000488989 ZSCAN5CA6NGD5 496 aaPredicted RBP16.35■□□□□ 0.21
CLDN11-208ENST00000488989 LOC730098B7Z3J9 87 aa16.35■□□□□ 0.21
CLDN11-208ENST00000488989 J3KR12 359 aa16.35■□□□□ 0.21
CLDN11-208ENST00000488989 CTIFO43310 598 aaKnown RBP16.35■□□□□ 0.21
CLDN11-208ENST00000488989 KRT14P02533 472 aa16.35■□□□□ 0.21
CLDN11-208ENST00000488989 PABPC1P11940 636 aaKnown RBP16.35■□□□□ 0.21
CLDN11-208ENST00000488989 IL9P15248 144 aa16.35■□□□□ 0.21
CLDN11-208ENST00000488989 PTPN3P26045 913 aa16.35■□□□□ 0.21
CLDN11-208ENST00000488989 GJA4P35212 333 aa16.35■□□□□ 0.21
CLDN11-208ENST00000488989 EIF2DP41214 584 aaKnown RBP16.35■□□□□ 0.21
CLDN11-208ENST00000488989 DRG2P55039 364 aaKnown RBP16.35■□□□□ 0.21
CLDN11-208ENST00000488989 AAK1Q2M2I8 961 aa16.35■□□□□ 0.21
CLDN11-208ENST00000488989 ITPRIPL2Q3MIP1 535 aa16.35■□□□□ 0.21
CLDN11-208ENST00000488989 TEX44Q53QW1 395 aa16.35■□□□□ 0.21
CLDN11-208ENST00000488989 IL31Q6EBC2 164 aa16.35■□□□□ 0.21
CLDN11-208ENST00000488989 C4orf22Q6V702 233 aa16.35■□□□□ 0.21
CLDN11-208ENST00000488989 GSTA5Q7RTV2 222 aa16.35■□□□□ 0.21
CLDN11-208ENST00000488989 C12orf40Q86WS4 652 aa16.35■□□□□ 0.21
CLDN11-208ENST00000488989 APCDD1Q8J025 514 aa16.35■□□□□ 0.21
CLDN11-208ENST00000488989 CCDC89Q8N998 374 aa16.35■□□□□ 0.21
CLDN11-208ENST00000488989 UBXN4Q92575 508 aa16.35■□□□□ 0.21
CLDN11-208ENST00000488989 ACDQ96AP0 544 aa16.35■□□□□ 0.21
CLDN11-208ENST00000488989 SPATA13Q96N96 652 aa16.35■□□□□ 0.21
CLDN11-208ENST00000488989 ERP44Q9BS26 406 aa16.35■□□□□ 0.21
CLDN11-208ENST00000488989 TRIM51Q9BSJ1 452 aa16.35■□□□□ 0.21
CLDN11-208ENST00000488989 RAB17Q9H0T7 212 aa16.35■□□□□ 0.21
CLDN11-208ENST00000488989 ABCB8Q9NUT2 735 aa16.35■□□□□ 0.21
CLDN11-208ENST00000488989 DMGDHQ9UI17 866 aaKnown RBP16.35■□□□□ 0.21
CLDN11-208ENST00000488989 GGA2Q9UJY4 613 aa16.35■□□□□ 0.21
CLDN11-208ENST00000488989 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.34■□□□□ 0.21
CLDN11-208ENST00000488989 KCNK1O00180 336 aa16.34■□□□□ 0.21
CLDN11-208ENST00000488989 RNF103O00237 685 aa16.34■□□□□ 0.21
CLDN11-208ENST00000488989 OPHN1O60890 802 aa16.34■□□□□ 0.21
CLDN11-208ENST00000488989 TULP3O75386 442 aa16.34■□□□□ 0.21
CLDN11-208ENST00000488989 STK10O94804 968 aaKnown RBP16.34■□□□□ 0.21
CLDN11-208ENST00000488989 HEXIM1O94992 359 aaKnown RBP16.34■□□□□ 0.21
CLDN11-208ENST00000488989 IFNB1P01574 187 aa16.34■□□□□ 0.21
CLDN11-208ENST00000488989 CCNB1P14635 433 aa16.34■□□□□ 0.21
CLDN11-208ENST00000488989 IVDP26440 423 aa16.34■□□□□ 0.21
CLDN11-208ENST00000488989 RPL22P35268 128 aaKnown RBP16.34■□□□□ 0.21
CLDN11-208ENST00000488989 NRLP54845 237 aa16.34■□□□□ 0.21
CLDN11-208ENST00000488989 MRPS25P82663 173 aaKnown RBP16.34■□□□□ 0.21
CLDN11-208ENST00000488989 ARF5P84085 180 aa16.34■□□□□ 0.21
CLDN11-208ENST00000488989 TFF2Q03403 129 aa16.34■□□□□ 0.21
CLDN11-208ENST00000488989 ZBTB17Q13105 803 aa16.34■□□□□ 0.21
CLDN11-208ENST00000488989 RFTN1Q14699 578 aaPredicted RBP16.34■□□□□ 0.21
CLDN11-208ENST00000488989 PPP1R7Q15435 360 aa16.34■□□□□ 0.21
CLDN11-208ENST00000488989 PITRM1Q5JRX3 1037 aa16.34■□□□□ 0.21
CLDN11-208ENST00000488989 ANKRD20A2Q5SQ80 823 aa16.34■□□□□ 0.21
CLDN11-208ENST00000488989 TMCO4Q5TGY1 634 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms