RNA–Protein interactions for RNA: ENST00000488765.1

MCF2L-229, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 3,205 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-229ENST00000488765 RGSL1A5PLK6 1076 aa16.48■□□□□ 0.23
MCF2L-229ENST00000488765 TMEM233B4DJY2 109 aa16.48■□□□□ 0.23
MCF2L-229ENST00000488765 PLIN3O60664 434 aa16.48■□□□□ 0.23
MCF2L-229ENST00000488765 BMP10O95393 424 aa16.48■□□□□ 0.23
MCF2L-229ENST00000488765 IL1BP01584 269 aa16.48■□□□□ 0.23
MCF2L-229ENST00000488765 OSBPP22059 807 aa16.48■□□□□ 0.23
MCF2L-229ENST00000488765 TYK2P29597 1187 aa16.48■□□□□ 0.23
MCF2L-229ENST00000488765 ADSLP30566 484 aaPredicted RBP16.48■□□□□ 0.23
MCF2L-229ENST00000488765 SH3PXD2AQ5TCZ1 1133 aa16.48■□□□□ 0.23
MCF2L-229ENST00000488765 PTCD2Q8WV60 388 aaKnown RBP16.48■□□□□ 0.23
MCF2L-229ENST00000488765 ITPKCQ96DU7 683 aa16.48■□□□□ 0.23
MCF2L-229ENST00000488765 CTRCQ99895 268 aa16.48■□□□□ 0.23
MCF2L-229ENST00000488765 TRIM39Q9HCM9 518 aa16.48■□□□□ 0.23
MCF2L-229ENST00000488765 EGFL7Q9UHF1 273 aa16.48■□□□□ 0.23
MCF2L-229ENST00000488765 PADI4Q9UM07 663 aa16.48■□□□□ 0.23
MCF2L-229ENST00000488765 MYO18AQ92614 2054 aaKnown RBP16.48■□□□□ 0.23
MCF2L-229ENST00000488765 C9JVG2 144 aa16.47■□□□□ 0.23
MCF2L-229ENST00000488765 LTFP02788 710 aa16.47■□□□□ 0.23
MCF2L-229ENST00000488765 ELK4P28324 431 aa16.47■□□□□ 0.23
MCF2L-229ENST00000488765 GLRBP48167 497 aa16.47■□□□□ 0.23
MCF2L-229ENST00000488765 SESN2P58004 480 aaPredicted RBP16.47■□□□□ 0.23
MCF2L-229ENST00000488765 PAGE2BQ5JRK9 111 aa16.47■□□□□ 0.23
MCF2L-229ENST00000488765 PEX5LQ8IYB4 626 aa16.47■□□□□ 0.23
MCF2L-229ENST00000488765 JOSD2Q8TAC2 188 aa16.47■□□□□ 0.23
MCF2L-229ENST00000488765 ZNF516Q92618 1163 aa16.47■□□□□ 0.23
MCF2L-229ENST00000488765 CSF3RQ99062 836 aa16.47■□□□□ 0.23
MCF2L-229ENST00000488765 RIC8BQ9NVN3 520 aa16.47■□□□□ 0.23
MCF2L-229ENST00000488765 FETUBQ9UGM5 382 aa16.47■□□□□ 0.23
MCF2L-229ENST00000488765 TMEM191CA6NGB0 347 aa16.47■□□□□ 0.23
MCF2L-229ENST00000488765 PTP4A2Q12974 167 aa16.47■□□□□ 0.23
MCF2L-229ENST00000488765 SLC22A16Q86VW1 577 aa16.47■□□□□ 0.23
MCF2L-229ENST00000488765 SLC38A6Q8IZM9 456 aa16.47■□□□□ 0.23
MCF2L-229ENST00000488765 CALML6Q8TD86 181 aa16.47■□□□□ 0.23
MCF2L-229ENST00000488765 ZFP90Q8TF47 636 aa16.47■□□□□ 0.23
MCF2L-229ENST00000488765 SLCO4A1Q96BD0 722 aa16.47■□□□□ 0.23
MCF2L-229ENST00000488765 CEP41Q9BYV8 373 aa16.47■□□□□ 0.23
MCF2L-229ENST00000488765 TRIT1Q9H3H1 467 aaKnown RBP16.47■□□□□ 0.23
MCF2L-229ENST00000488765 NANOGQ9H9S0 305 aa16.47■□□□□ 0.23
MCF2L-229ENST00000488765 TMEM8AQ9HCN3 771 aa16.47■□□□□ 0.23
MCF2L-229ENST00000488765 ZSCAN5BA6NJL1 495 aa16.47■□□□□ 0.23
MCF2L-229ENST00000488765 CLOCKO15516 846 aa16.47■□□□□ 0.23
MCF2L-229ENST00000488765 BCAS2O75934 225 aaPredicted RBP16.47■□□□□ 0.23
MCF2L-229ENST00000488765 C1QAP02745 245 aa16.47■□□□□ 0.23
MCF2L-229ENST00000488765 NME5P56597 212 aa16.47■□□□□ 0.23
MCF2L-229ENST00000488765 OXA1LQ15070 435 aa16.47■□□□□ 0.23
MCF2L-229ENST00000488765 NHSL2Q5HYW2 709 aa16.47■□□□□ 0.23
MCF2L-229ENST00000488765 WDR44Q5JSH3 913 aa16.47■□□□□ 0.23
MCF2L-229ENST00000488765 CAND1Q86VP6 1230 aaKnown RBP16.47■□□□□ 0.23
MCF2L-229ENST00000488765 GLT1D1Q96MS3 346 aa16.47■□□□□ 0.23
MCF2L-229ENST00000488765 ZNF577Q9BSK1 485 aa16.47■□□□□ 0.23
MCF2L-229ENST00000488765 POPDC2Q9HBU9 364 aa16.47■□□□□ 0.23
MCF2L-229ENST00000488765 LTB4R2Q9NPC1 389 aa16.47■□□□□ 0.23
MCF2L-229ENST00000488765 GPATCH2LQ9NWQ4 482 aa16.47■□□□□ 0.23
MCF2L-229ENST00000488765 PRR12Q9ULL5 1215 aa16.47■□□□□ 0.23
MCF2L-229ENST00000488765 TAF1LQ8IZX4 1826 aa16.46■□□□□ 0.23
MCF2L-229ENST00000488765 DLEC1Q9Y238 1755 aa16.46■□□□□ 0.23
MCF2L-229ENST00000488765 A8MV72 311 aaPredicted RBP16.46■□□□□ 0.23
MCF2L-229ENST00000488765 ACOT8O14734 319 aa16.46■□□□□ 0.23
MCF2L-229ENST00000488765 DPEP1P16444 411 aa16.46■□□□□ 0.23
MCF2L-229ENST00000488765 PRKAA2P54646 552 aa16.46■□□□□ 0.23
MCF2L-229ENST00000488765 WDR45BQ5MNZ6 344 aa16.46■□□□□ 0.23
MCF2L-229ENST00000488765 FAAH2Q6GMR7 532 aa16.46■□□□□ 0.23
MCF2L-229ENST00000488765 SCARA5Q6ZMJ2 495 aa16.46■□□□□ 0.23
MCF2L-229ENST00000488765 TMEM179Q6ZVK1 233 aa16.46■□□□□ 0.23
MCF2L-229ENST00000488765 ABRAQ8N0Z2 381 aa16.46■□□□□ 0.23
MCF2L-229ENST00000488765 ADNPQ9H2P0 1102 aa16.46■□□□□ 0.23
MCF2L-229ENST00000488765 PARVBQ9HBI1 364 aa16.46■□□□□ 0.23
MCF2L-229ENST00000488765 EXOC7Q9UPT5 735 aa16.46■□□□□ 0.23
MCF2L-229ENST00000488765 IGKV6D-41A0A0C4DH26 115 aa16.46■□□□□ 0.23
MCF2L-229ENST00000488765 TNFRSF10AO00220 468 aa16.46■□□□□ 0.23
MCF2L-229ENST00000488765 MFN2O95140 757 aa16.46■□□□□ 0.23
MCF2L-229ENST00000488765 ITGBL1O95965 494 aaPredicted RBP16.46■□□□□ 0.23
MCF2L-229ENST00000488765 SNHG28P0DPA3 235 aa16.46■□□□□ 0.23
MCF2L-229ENST00000488765 RBL1P28749 1068 aa16.46■□□□□ 0.23
MCF2L-229ENST00000488765 PPP1R3AQ16821 1122 aa16.46■□□□□ 0.23
MCF2L-229ENST00000488765 SLC9A9Q8IVB4 645 aa16.46■□□□□ 0.23
MCF2L-229ENST00000488765 DTX3Q8N9I9 347 aa16.46■□□□□ 0.23
MCF2L-229ENST00000488765 ABHD11Q8NFV4 315 aa16.46■□□□□ 0.23
MCF2L-229ENST00000488765 TRUB1Q8WWH5 349 aaKnown RBP16.46■□□□□ 0.23
MCF2L-229ENST00000488765 MAGED4Q96JG8 741 aa16.46■□□□□ 0.23
MCF2L-229ENST00000488765 WDR6Q9NNW5 1121 aaKnown RBP16.46■□□□□ 0.23
MCF2L-229ENST00000488765 TRPV5Q9NQA5 729 aa16.46■□□□□ 0.23
MCF2L-229ENST00000488765 RBAKQ9NYW8 714 aaPredicted RBP16.46■□□□□ 0.23
MCF2L-229ENST00000488765 WDR27A2RRH5 827 aa16.45■□□□□ 0.22
MCF2L-229ENST00000488765 SLC15A5A6NIM6 579 aa16.45■□□□□ 0.22
MCF2L-229ENST00000488765 GRAP2O75791 330 aa16.45■□□□□ 0.22
MCF2L-229ENST00000488765 EGFRP00533 1210 aa16.45■□□□□ 0.22
MCF2L-229ENST00000488765 ACAT1P24752 427 aaKnown RBP16.45■□□□□ 0.22
MCF2L-229ENST00000488765 POLR2BP30876 1174 aaKnown RBP16.45■□□□□ 0.22
MCF2L-229ENST00000488765 GABRB2P47870 512 aa16.45■□□□□ 0.22
MCF2L-229ENST00000488765 GPC3P51654 580 aa16.45■□□□□ 0.22
MCF2L-229ENST00000488765 ROR1Q01973 937 aa16.45■□□□□ 0.22
MCF2L-229ENST00000488765 SPCS2Q15005 226 aa16.45■□□□□ 0.22
MCF2L-229ENST00000488765 DRICH1Q6PGQ1 229 aaPredicted RBP16.45■□□□□ 0.22
MCF2L-229ENST00000488765 ARCQ7LC44 396 aa16.45■□□□□ 0.22
MCF2L-229ENST00000488765 LGI2Q8N0V4 545 aa16.45■□□□□ 0.22
MCF2L-229ENST00000488765 SPATA6LQ8N4H0 392 aa16.45■□□□□ 0.22
MCF2L-229ENST00000488765 ARFGAP1Q8N6T3 406 aa16.45■□□□□ 0.22
MCF2L-229ENST00000488765 CCDC167Q9P0B6 97 aa16.45■□□□□ 0.22
MCF2L-229ENST00000488765 MAST2Q6P0Q8 1798 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms