RNA–Protein interactions for RNA: ENST00000488127.1

LDLRAP1-207, Transcript of low density lipoprotein receptor adaptor protein 1, humanhuman

TSL 2

Gene LDLRAP1, Length 4,670 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1-207ENST00000488127 AMPD2Q01433 879 aa11.87□□□□□ -0.51
LDLRAP1-207ENST00000488127 TBL3Q12788 808 aaKnown RBP11.87□□□□□ -0.51
LDLRAP1-207ENST00000488127 STX5Q13190 355 aa11.87□□□□□ -0.51
LDLRAP1-207ENST00000488127 TRADDQ15628 312 aa11.87□□□□□ -0.51
LDLRAP1-207ENST00000488127 RFWD2Q8NHY2 731 aa11.87□□□□□ -0.51
LDLRAP1-207ENST00000488127 VPS50Q96JG6 964 aa11.87□□□□□ -0.51
LDLRAP1-207ENST00000488127 GORASP1Q9BQQ3 440 aa11.87□□□□□ -0.51
LDLRAP1-207ENST00000488127 TMEM79Q9BSE2 394 aa11.87□□□□□ -0.51
LDLRAP1-207ENST00000488127 GRIP2Q9C0E4 1043 aa11.87□□□□□ -0.51
LDLRAP1-207ENST00000488127 MPP6Q9NZW5 540 aa11.87□□□□□ -0.51
LDLRAP1-207ENST00000488127 TEKT2Q9UIF3 430 aa11.87□□□□□ -0.51
LDLRAP1-207ENST00000488127 DERAQ9Y315 318 aa11.87□□□□□ -0.51
LDLRAP1-207ENST00000488127 SUPT3HB4E1H0 165 aa11.87□□□□□ -0.51
LDLRAP1-207ENST00000488127 NCAM2O15394 837 aa11.87□□□□□ -0.51
LDLRAP1-207ENST00000488127 BUD23O43709 281 aaKnown RBP11.87□□□□□ -0.51
LDLRAP1-207ENST00000488127 SHBGP04278 402 aa11.87□□□□□ -0.51
LDLRAP1-207ENST00000488127 OCM2P0CE71 109 aa11.87□□□□□ -0.51
LDLRAP1-207ENST00000488127 OCMP0CE72 109 aaPredicted RBP11.87□□□□□ -0.51
LDLRAP1-207ENST00000488127 PBLDP30039 288 aaPredicted RBP11.87□□□□□ -0.51
LDLRAP1-207ENST00000488127 LBX1P52954 281 aa11.87□□□□□ -0.51
LDLRAP1-207ENST00000488127 TAS2R40P59535 323 aa11.87□□□□□ -0.51
LDLRAP1-207ENST00000488127 PPIGQ13427 754 aaKnown RBP eCLIP11.87□□□□□ -0.519e-8■■■■□ 20
LDLRAP1-207ENST00000488127 PTK6Q13882 451 aa11.87□□□□□ -0.51
LDLRAP1-207ENST00000488127 MTFR1Q15390 333 aa11.87□□□□□ -0.51
LDLRAP1-207ENST00000488127 QPCTQ16769 361 aa11.87□□□□□ -0.51
LDLRAP1-207ENST00000488127 TCHHL1Q5QJ38 904 aaPredicted RBP11.87□□□□□ -0.51
LDLRAP1-207ENST00000488127 MRNIPQ6NTE8 343 aa11.87□□□□□ -0.51
LDLRAP1-207ENST00000488127 TAPT1Q6NXT6 567 aa11.87□□□□□ -0.51
LDLRAP1-207ENST00000488127 CTU1Q7Z7A3 348 aaKnown RBP11.87□□□□□ -0.51
LDLRAP1-207ENST00000488127 PHF13Q86YI8 300 aaPredicted RBP11.87□□□□□ -0.51
LDLRAP1-207ENST00000488127 TCP10LQ8TDR4 215 aa11.87□□□□□ -0.51
LDLRAP1-207ENST00000488127 TFAP2BQ92481 460 aa11.87□□□□□ -0.51
LDLRAP1-207ENST00000488127 SAR1AQ9NR31 198 aa11.87□□□□□ -0.51
LDLRAP1-207ENST00000488127 DMAC2Q9NW81 257 aa11.87□□□□□ -0.51
LDLRAP1-207ENST00000488127 PCDHGC5Q9Y5F6 944 aa11.87□□□□□ -0.51
LDLRAP1-207ENST00000488127 TCHHQ07283 1943 aa11.87□□□□□ -0.51
LDLRAP1-207ENST00000488127 TRAV19A0A0A6YYK7 116 aa11.87□□□□□ -0.51
LDLRAP1-207ENST00000488127 E9PBE3 544 aa11.87□□□□□ -0.51
LDLRAP1-207ENST00000488127 KLHL41O60662 606 aa11.87□□□□□ -0.51
LDLRAP1-207ENST00000488127 USP1O94782 785 aa11.87□□□□□ -0.51
LDLRAP1-207ENST00000488127 PGM3O95394 542 aa11.87□□□□□ -0.51
LDLRAP1-207ENST00000488127 SGO1Q5FBB7 561 aa11.87□□□□□ -0.51
LDLRAP1-207ENST00000488127 PMF1Q6P1K2 205 aa11.87□□□□□ -0.51
LDLRAP1-207ENST00000488127 SPPL2BQ8TCT7 592 aa11.87□□□□□ -0.51
LDLRAP1-207ENST00000488127 CKAP2Q8WWK9 683 aa11.87□□□□□ -0.51
LDLRAP1-207ENST00000488127 TSPAN17Q96FV3 270 aa11.87□□□□□ -0.51
LDLRAP1-207ENST00000488127 C11orf49Q9H6J7 331 aa11.87□□□□□ -0.51
LDLRAP1-207ENST00000488127 LRRC40Q9H9A6 602 aa11.87□□□□□ -0.51
LDLRAP1-207ENST00000488127 ETS2P15036 469 aa11.87□□□□□ -0.51
LDLRAP1-207ENST00000488127 CDH2P19022 906 aaPredicted RBP11.87□□□□□ -0.51
LDLRAP1-207ENST00000488127 RGS4P49798 205 aa11.87□□□□□ -0.51
LDLRAP1-207ENST00000488127 BMPR2Q13873 1038 aa11.87□□□□□ -0.51
LDLRAP1-207ENST00000488127 VARS2Q5ST30 1063 aaKnown RBP11.87□□□□□ -0.51
LDLRAP1-207ENST00000488127 IQCKQ8N0W5 287 aa11.87□□□□□ -0.51
LDLRAP1-207ENST00000488127 CFAP52Q8N1V2 620 aa11.87□□□□□ -0.51
LDLRAP1-207ENST00000488127 EIF1ADQ8N9N8 165 aaKnown RBP11.87□□□□□ -0.51
LDLRAP1-207ENST00000488127 PCED1BQ96HM7 432 aa11.87□□□□□ -0.51
LDLRAP1-207ENST00000488127 ZFRQ96KR1 1074 aaKnown RBP11.87□□□□□ -0.51
LDLRAP1-207ENST00000488127 PCYT2Q99447 389 aa11.87□□□□□ -0.51
LDLRAP1-207ENST00000488127 DAPK2Q9UIK4 370 aa11.87□□□□□ -0.51
LDLRAP1-207ENST00000488127 APOC4-APOC2K7ER74 178 aa11.86□□□□□ -0.51
LDLRAP1-207ENST00000488127 KRT36O76013 467 aa11.86□□□□□ -0.51
LDLRAP1-207ENST00000488127 APOC2P02655 101 aa11.86□□□□□ -0.51
LDLRAP1-207ENST00000488127 CYP1A2P05177 515 aa11.86□□□□□ -0.51
LDLRAP1-207ENST00000488127 MATKP42679 507 aa11.86□□□□□ -0.51
LDLRAP1-207ENST00000488127 XRCC4Q13426 336 aa11.86□□□□□ -0.51
LDLRAP1-207ENST00000488127 PKN2Q16513 984 aaKnown RBP11.86□□□□□ -0.51
LDLRAP1-207ENST00000488127 B3GNT6Q6ZMB0 384 aa11.86□□□□□ -0.51
LDLRAP1-207ENST00000488127 AUTS2Q8WXX7 1259 aa11.86□□□□□ -0.51
LDLRAP1-207ENST00000488127 ZNF75CPQ92670 426 aaPredicted RBP11.86□□□□□ -0.51
LDLRAP1-207ENST00000488127 USP13Q92995 863 aaPredicted RBP11.86□□□□□ -0.51
LDLRAP1-207ENST00000488127 PRDM12Q9H4Q4 367 aa11.86□□□□□ -0.51
LDLRAP1-207ENST00000488127 PCDH9Q9HC56 1237 aa11.86□□□□□ -0.51
LDLRAP1-207ENST00000488127 A0A1W2PQ45 241 aaPredicted RBP11.86□□□□□ -0.51
LDLRAP1-207ENST00000488127 A0A1W2PQY0 241 aa11.86□□□□□ -0.51
LDLRAP1-207ENST00000488127 TM9SF1O15321 606 aa11.86□□□□□ -0.51
LDLRAP1-207ENST00000488127 ERCC2P18074 760 aa11.86□□□□□ -0.51
LDLRAP1-207ENST00000488127 MMP8P22894 467 aa11.86□□□□□ -0.51
LDLRAP1-207ENST00000488127 TKTP29401 623 aaKnown RBP11.86□□□□□ -0.51
LDLRAP1-207ENST00000488127 RUNX1T1Q06455 604 aa11.86□□□□□ -0.51
LDLRAP1-207ENST00000488127 ACAP1Q15027 740 aa11.86□□□□□ -0.51
LDLRAP1-207ENST00000488127 TIGD5Q53EQ6 642 aa11.86□□□□□ -0.51
LDLRAP1-207ENST00000488127 DEPDC1Q5TB30 811 aa11.86□□□□□ -0.51
LDLRAP1-207ENST00000488127 ECHDC2Q86YB7 292 aa11.86□□□□□ -0.51
LDLRAP1-207ENST00000488127 NAT16Q8N8M0 369 aa11.86□□□□□ -0.51
LDLRAP1-207ENST00000488127 GRIN3AQ8TCU5 1115 aa11.86□□□□□ -0.51
LDLRAP1-207ENST00000488127 OXNAD1Q96HP4 312 aaPredicted RBP11.86□□□□□ -0.51
LDLRAP1-207ENST00000488127 NR1H4Q96RI1 486 aaPredicted RBP11.86□□□□□ -0.51
LDLRAP1-207ENST00000488127 BBS2Q9BXC9 721 aa11.86□□□□□ -0.51
LDLRAP1-207ENST00000488127 CASS4Q9NQ75 786 aa11.86□□□□□ -0.51
LDLRAP1-207ENST00000488127 SCN3BQ9NY72 215 aa11.86□□□□□ -0.51
LDLRAP1-207ENST00000488127 UBA2Q9UBT2 640 aaPredicted RBP11.86□□□□□ -0.51
LDLRAP1-207ENST00000488127 CTNNAL1Q9UBT7 734 aa11.86□□□□□ -0.51
LDLRAP1-207ENST00000488127 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.86□□□□□ -0.51
LDLRAP1-207ENST00000488127 IRS2Q9Y4H2 1338 aa11.86□□□□□ -0.51
LDLRAP1-207ENST00000488127 LINC00854A0A1B0GVQ3 168 aa11.86□□□□□ -0.51
LDLRAP1-207ENST00000488127 A0A1W2PQH9 124 aa11.86□□□□□ -0.51
LDLRAP1-207ENST00000488127 MEI4A8MW99 385 aa11.86□□□□□ -0.51
LDLRAP1-207ENST00000488127 PPEF2O14830 753 aa11.86□□□□□ -0.51
LDLRAP1-207ENST00000488127 CCL16O15467 120 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms