RNA–Protein interactions for RNA: ENST00000487617.5

HDAC4-209, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 819 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-209ENST00000487617 OR7D4Q8NG98 312 aa20.95■□□□□ 0.94
HDAC4-209ENST00000487617 OR8D1Q8WZ84 308 aa20.95■□□□□ 0.94
HDAC4-209ENST00000487617 VCPIP1Q96JH7 1222 aa20.95■□□□□ 0.94
HDAC4-209ENST00000487617 SPON2Q9BUD6 331 aa20.95■□□□□ 0.94
HDAC4-209ENST00000487617 OSBPL2Q9H1P3 480 aa20.95■□□□□ 0.94
HDAC4-209ENST00000487617 NEUROG2Q9H2A3 272 aa20.95■□□□□ 0.94
HDAC4-209ENST00000487617 HS3ST2Q9Y278 367 aa20.95■□□□□ 0.94
HDAC4-209ENST00000487617 ZBTB32Q9Y2Y4 487 aaPredicted RBP20.95■□□□□ 0.94
HDAC4-209ENST00000487617 DNAH14Q0VDD8 3507 aa20.95■□□□□ 0.94
HDAC4-209ENST00000487617 FAM47DPA6NHR8 397 aa20.94■□□□□ 0.94
HDAC4-209ENST00000487617 BCAT2O15382 392 aaPredicted RBP20.94■□□□□ 0.94
HDAC4-209ENST00000487617 CCP110O43303 1012 aa20.94■□□□□ 0.94
HDAC4-209ENST00000487617 BNIP3LO60238 219 aa20.94■□□□□ 0.94
HDAC4-209ENST00000487617 MT-CO1P00395 513 aa20.94■□□□□ 0.94
HDAC4-209ENST00000487617 PLEKP08567 350 aaPredicted RBP20.94■□□□□ 0.94
HDAC4-209ENST00000487617 PRKCIP41743 596 aa20.94■□□□□ 0.94
HDAC4-209ENST00000487617 FIGNQ5HY92 759 aa20.94■□□□□ 0.94
HDAC4-209ENST00000487617 PPP1R15BQ5SWA1 713 aa20.94■□□□□ 0.94
HDAC4-209ENST00000487617 MANEALQ5VSG8 457 aa20.94■□□□□ 0.94
HDAC4-209ENST00000487617 SCYL2Q6P3W7 929 aa20.94■□□□□ 0.94
HDAC4-209ENST00000487617 ZNF783Q6ZMS7 281 aa20.94■□□□□ 0.94
HDAC4-209ENST00000487617 Q6ZVU0 165 aa20.94■□□□□ 0.94
HDAC4-209ENST00000487617 DSG4Q86SJ6 1040 aa20.94■□□□□ 0.94
HDAC4-209ENST00000487617 DRC7Q8IY82 874 aa20.94■□□□□ 0.94
HDAC4-209ENST00000487617 NTAN1Q96AB6 310 aa20.94■□□□□ 0.94
HDAC4-209ENST00000487617 MAGEB5Q9BZ81 275 aa20.94■□□□□ 0.94
HDAC4-209ENST00000487617 ZNF212Q9UDV6 495 aa20.94■□□□□ 0.94
HDAC4-209ENST00000487617 FZD4Q9ULV1 537 aa20.94■□□□□ 0.94
HDAC4-209ENST00000487617 FAM72CH0Y354 149 aa20.93■□□□□ 0.94
HDAC4-209ENST00000487617 KCNK5O95279 499 aa20.93■□□□□ 0.94
HDAC4-209ENST00000487617 SKILP12757 684 aa20.93■□□□□ 0.94
HDAC4-209ENST00000487617 SRCP12931 536 aa20.93■□□□□ 0.94
HDAC4-209ENST00000487617 GOT1P17174 413 aa20.93■□□□□ 0.94
HDAC4-209ENST00000487617 DESP17661 470 aa20.93■□□□□ 0.94
HDAC4-209ENST00000487617 GALCP54803 685 aa20.93■□□□□ 0.94
HDAC4-209ENST00000487617 FAM72AQ5TYM5 149 aa20.93■□□□□ 0.94
HDAC4-209ENST00000487617 KIAA0895LQ68EN5 471 aa20.93■□□□□ 0.94
HDAC4-209ENST00000487617 FAM72DQ6L9T8 149 aa20.93■□□□□ 0.94
HDAC4-209ENST00000487617 LINGO4Q6UY18 593 aa20.93■□□□□ 0.94
HDAC4-209ENST00000487617 SLFN11Q7Z7L1 901 aa20.93■□□□□ 0.94
HDAC4-209ENST00000487617 FAM72BQ86X60 149 aa20.93■□□□□ 0.94
HDAC4-209ENST00000487617 MINDY1Q8N5J2 469 aa20.93■□□□□ 0.94
HDAC4-209ENST00000487617 AADATQ8N5Z0 425 aa20.93■□□□□ 0.94
HDAC4-209ENST00000487617 OR2I1PQ8NGU4 316 aa20.93■□□□□ 0.94
HDAC4-209ENST00000487617 BIRC7Q96CA5 298 aa20.93■□□□□ 0.94
HDAC4-209ENST00000487617 CNPY3Q9BT09 278 aa20.93■□□□□ 0.94
HDAC4-209ENST00000487617 ATP13A1Q9HD20 1204 aa20.93■□□□□ 0.94
HDAC4-209ENST00000487617 ADAMTS1Q9UHI8 967 aa20.93■□□□□ 0.94
HDAC4-209ENST00000487617 LRRC72A6NJI9 287 aa20.92■□□□□ 0.94
HDAC4-209ENST00000487617 K7ERQ8 282 aa20.92■□□□□ 0.94
HDAC4-209ENST00000487617 CBX4O00257 560 aa20.92■□□□□ 0.94
HDAC4-209ENST00000487617 OPHN1O60890 802 aa20.92■□□□□ 0.94
HDAC4-209ENST00000487617 LRIG2O94898 1065 aa20.92■□□□□ 0.94
HDAC4-209ENST00000487617 RHOQP17081 205 aa20.92■□□□□ 0.94
HDAC4-209ENST00000487617 GLDCP23378 1020 aa20.92■□□□□ 0.94
HDAC4-209ENST00000487617 PBX1P40424 430 aa20.92■□□□□ 0.94
HDAC4-209ENST00000487617 NOVA1P51513 510 aaKnown RBP20.92■□□□□ 0.94
HDAC4-209ENST00000487617 GNA12Q03113 381 aa20.92■□□□□ 0.94
HDAC4-209ENST00000487617 GRIK2Q13002 908 aa20.92■□□□□ 0.94
HDAC4-209ENST00000487617 MAMLD1Q13495 774 aa20.92■□□□□ 0.94
HDAC4-209ENST00000487617 EFHC2Q5JST6 749 aa20.92■□□□□ 0.94
HDAC4-209ENST00000487617 FAM46CQ5VWP2 391 aa20.92■□□□□ 0.94
HDAC4-209ENST00000487617 PSAPL1Q6NUJ1 521 aa20.92■□□□□ 0.94
HDAC4-209ENST00000487617 NCEH1Q6PIU2 408 aa20.92■□□□□ 0.94
HDAC4-209ENST00000487617 DNAAF5Q86Y56 855 aa20.92■□□□□ 0.94
HDAC4-209ENST00000487617 C1orf216Q8TAB5 229 aa20.92■□□□□ 0.94
HDAC4-209ENST00000487617 TBC1D31Q96DN5 1066 aa20.92■□□□□ 0.94
HDAC4-209ENST00000487617 PARVAQ9NVD7 372 aa20.92■□□□□ 0.94
HDAC4-209ENST00000487617 FARP1Q9Y4F1 1045 aaPredicted RBP20.92■□□□□ 0.94
HDAC4-209ENST00000487617 DDX3XO00571 662 aaKnown RBP eCLIP20.91■□□□□ 0.94
HDAC4-209ENST00000487617 SPTBN2O15020 2390 aa20.91■□□□□ 0.94
HDAC4-209ENST00000487617 MCF2LO15068 1137 aa20.91■□□□□ 0.94
HDAC4-209ENST00000487617 ALOX15BO15296 676 aa20.91■□□□□ 0.94
HDAC4-209ENST00000487617 ATMINO43313 823 aaPredicted RBP20.91■□□□□ 0.94
HDAC4-209ENST00000487617 SMAD6O43541 496 aaKnown RBP20.91■□□□□ 0.94
HDAC4-209ENST00000487617 FTLP02792 175 aaPredicted RBP20.91■□□□□ 0.94
HDAC4-209ENST00000487617 GZMAP12544 262 aa20.91■□□□□ 0.94
HDAC4-209ENST00000487617 CD27P26842 260 aa20.91■□□□□ 0.94
HDAC4-209ENST00000487617 PI4KAP42356 2102 aa20.91■□□□□ 0.94
HDAC4-209ENST00000487617 CLCN6P51797 869 aa20.91■□□□□ 0.94
HDAC4-209ENST00000487617 OGDHQ02218 1023 aa20.91■□□□□ 0.94
HDAC4-209ENST00000487617 SCAPQ12770 1279 aa20.91■□□□□ 0.94
HDAC4-209ENST00000487617 NUMA1Q14980 2115 aa20.91■□□□□ 0.94
HDAC4-209ENST00000487617 RETSATQ6NUM9 610 aa20.91■□□□□ 0.94
HDAC4-209ENST00000487617 OR2T34Q8NGX1 318 aa20.91■□□□□ 0.94
HDAC4-209ENST00000487617 OR14C36Q8NHC7 312 aa20.91■□□□□ 0.94
HDAC4-209ENST00000487617 CCDC114Q96M63 670 aa20.91■□□□□ 0.94
HDAC4-209ENST00000487617 ZDHHC5Q9C0B5 715 aa20.91■□□□□ 0.94
HDAC4-209ENST00000487617 RETREG1Q9H6L5 497 aa20.91■□□□□ 0.94
HDAC4-209ENST00000487617 TMEM248Q9NWD8 314 aa20.91■□□□□ 0.94
HDAC4-209ENST00000487617 SARDHQ9UL12 918 aa20.91■□□□□ 0.94
HDAC4-209ENST00000487617 PPM1HQ9ULR3 514 aa20.91■□□□□ 0.94
HDAC4-209ENST00000487617 SLCO1B1Q9Y6L6 691 aa20.91■□□□□ 0.94
HDAC4-209ENST00000487617 A0A1W2PQJ5 194 aa20.9■□□□□ 0.94
HDAC4-209ENST00000487617 C1QTNF3-AMACRE9PGA6 284 aa20.9■□□□□ 0.94
HDAC4-209ENST00000487617 ADRB1P08588 477 aa20.9■□□□□ 0.94
HDAC4-209ENST00000487617 ETFBP38117 255 aa20.9■□□□□ 0.94
HDAC4-209ENST00000487617 MAPKAPK2P49137 400 aa20.9■□□□□ 0.94
HDAC4-209ENST00000487617 AFF3P51826 1226 aaKnown RBP20.9■□□□□ 0.94
HDAC4-209ENST00000487617 METAP1P53582 386 aa20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms