RNA–Protein interactions for RNA: ENST00000487188.1

VPS13D-209, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2

Gene VPS13D, Length 3,990 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-209ENST00000487188 MRASO14807 208 aa6.35□□□□□ -1.39
VPS13D-209ENST00000487188 SLC7A1P30825 629 aa6.35□□□□□ -1.39
VPS13D-209ENST00000487188 RCVRNP35243 200 aa6.35□□□□□ -1.39
VPS13D-209ENST00000487188 GP5P40197 560 aa6.35□□□□□ -1.39
VPS13D-209ENST00000487188 YAP1P46937 504 aaKnown RBP6.35□□□□□ -1.39
VPS13D-209ENST00000487188 TAF5Q15542 800 aa6.35□□□□□ -1.39
VPS13D-209ENST00000487188 SAMD4BQ5PRF9 694 aaKnown RBP6.35□□□□□ -1.39
VPS13D-209ENST00000487188 STXBP5Q5T5C0 1151 aa6.35□□□□□ -1.39
VPS13D-209ENST00000487188 UTS2BQ765I0 119 aa6.35□□□□□ -1.39
VPS13D-209ENST00000487188 UNC5BQ8IZJ1 945 aa6.35□□□□□ -1.39
VPS13D-209ENST00000487188 CNTD1Q8N815 330 aa6.35□□□□□ -1.39
VPS13D-209ENST00000487188 MAPK15Q8TD08 544 aa6.35□□□□□ -1.39
VPS13D-209ENST00000487188 SEPT8Q92599 483 aa6.35□□□□□ -1.39
VPS13D-209ENST00000487188 APBA2Q99767 749 aa6.35□□□□□ -1.39
VPS13D-209ENST00000487188 ZNF518BQ9C0D4 1074 aa6.35□□□□□ -1.39
VPS13D-209ENST00000487188 IL1RL2Q9HB29 575 aa6.35□□□□□ -1.39
VPS13D-209ENST00000487188 SEPT9Q9UHD8 586 aaPredicted RBP6.35□□□□□ -1.39
VPS13D-209ENST00000487188 CDH7Q9ULB5 785 aa6.35□□□□□ -1.39
VPS13D-209ENST00000487188 RAP2CQ9Y3L5 183 aa6.35□□□□□ -1.39
VPS13D-209ENST00000487188 SLC30A1Q9Y6M5 507 aa6.35□□□□□ -1.39
VPS13D-209ENST00000487188 LAMB2P55268 1798 aa6.35□□□□□ -1.39
VPS13D-209ENST00000487188 GAKO14976 1311 aa6.35□□□□□ -1.39
VPS13D-209ENST00000487188 A0A096LPK6 155 aa6.34□□□□□ -1.39
VPS13D-209ENST00000487188 SLCO1B7G3V0H7 640 aa6.34□□□□□ -1.39
VPS13D-209ENST00000487188 TAF4O00268 1085 aa6.34□□□□□ -1.39
VPS13D-209ENST00000487188 DAB1O75553 588 aa6.34□□□□□ -1.39
VPS13D-209ENST00000487188 CLIC3O95833 236 aa6.34□□□□□ -1.39
VPS13D-209ENST00000487188 ABCG1P45844 678 aa6.34□□□□□ -1.39
VPS13D-209ENST00000487188 RHDQ02161 417 aa6.34□□□□□ -1.39
VPS13D-209ENST00000487188 MERTKQ12866 999 aa6.34□□□□□ -1.39
VPS13D-209ENST00000487188 INSCQ1MX18 579 aa6.34□□□□□ -1.39
VPS13D-209ENST00000487188 TIGD2Q4W5G0 525 aa6.34□□□□□ -1.39
VPS13D-209ENST00000487188 RSBN1Q5VWQ0 802 aaPredicted RBP6.34□□□□□ -1.39
VPS13D-209ENST00000487188 TIFABQ6ZNK6 161 aa6.34□□□□□ -1.39
VPS13D-209ENST00000487188 CHSY3Q70JA7 882 aa6.34□□□□□ -1.39
VPS13D-209ENST00000487188 ZFPM1Q8IX07 1006 aa6.34□□□□□ -1.39
VPS13D-209ENST00000487188 PCYOX1LQ8NBM8 494 aa6.34□□□□□ -1.39
VPS13D-209ENST00000487188 MAGED4Q96JG8 741 aa6.34□□□□□ -1.39
VPS13D-209ENST00000487188 OSBPL10Q9BXB5 764 aa6.34□□□□□ -1.39
VPS13D-209ENST00000487188 ST6GALNAC4Q9H4F1 302 aa6.34□□□□□ -1.39
VPS13D-209ENST00000487188 APOBEC3GQ9HC16 384 aaKnown RBP6.34□□□□□ -1.39
VPS13D-209ENST00000487188 SPAG4Q9NPE6 437 aa6.34□□□□□ -1.39
VPS13D-209ENST00000487188 SNX15Q9NRS6 342 aa6.34□□□□□ -1.39
VPS13D-209ENST00000487188 KCNH7Q9NS40 1196 aa6.34□□□□□ -1.39
VPS13D-209ENST00000487188 SUCOQ9UBS9 1254 aaKnown RBP6.34□□□□□ -1.39
VPS13D-209ENST00000487188 EMCNQ9ULC0 261 aa6.34□□□□□ -1.39
VPS13D-209ENST00000487188 SOBPA7XYQ1 873 aa6.34□□□□□ -1.39
VPS13D-209ENST00000487188 A8MU76 341 aa6.34□□□□□ -1.39
VPS13D-209ENST00000487188 PAPSS1O43252 624 aaPredicted RBP6.34□□□□□ -1.39
VPS13D-209ENST00000487188 MGEA5O60502 916 aa6.34□□□□□ -1.39
VPS13D-209ENST00000487188 GH2P01242 217 aa6.34□□□□□ -1.39
VPS13D-209ENST00000487188 CHRNGP07510 517 aa6.34□□□□□ -1.39
VPS13D-209ENST00000487188 MGAT1P26572 445 aa6.34□□□□□ -1.39
VPS13D-209ENST00000487188 SLC25A11Q02978 314 aaKnown RBP6.34□□□□□ -1.39
VPS13D-209ENST00000487188 DNASE1L3Q13609 305 aa6.34□□□□□ -1.39
VPS13D-209ENST00000487188 MTMR1Q13613 665 aa6.34□□□□□ -1.39
VPS13D-209ENST00000487188 HERC3Q15034 1050 aa6.34□□□□□ -1.39
VPS13D-209ENST00000487188 POLD3Q15054 466 aaPredicted RBP6.34□□□□□ -1.39
VPS13D-209ENST00000487188 PLCL1Q15111 1095 aa6.34□□□□□ -1.39
VPS13D-209ENST00000487188 BCL2A1Q16548 175 aa6.34□□□□□ -1.39
VPS13D-209ENST00000487188 CLPPQ16740 277 aaPredicted RBP6.34□□□□□ -1.39
VPS13D-209ENST00000487188 PHKG1Q16816 387 aa6.34□□□□□ -1.39
VPS13D-209ENST00000487188 SHROOM1Q2M3G4 852 aaPredicted RBP6.34□□□□□ -1.39
VPS13D-209ENST00000487188 BROXQ5VW32 411 aa6.34□□□□□ -1.39
VPS13D-209ENST00000487188 CES3Q6UWW8 571 aa6.34□□□□□ -1.39
VPS13D-209ENST00000487188 C4orf22Q6V702 233 aa6.34□□□□□ -1.39
VPS13D-209ENST00000487188 CYP2U1Q7Z449 544 aa6.34□□□□□ -1.39
VPS13D-209ENST00000487188 CCDC60Q8IWA6 550 aaPredicted RBP6.34□□□□□ -1.39
VPS13D-209ENST00000487188 NIPA2Q8N8Q9 360 aa6.34□□□□□ -1.39
VPS13D-209ENST00000487188 MINDY2Q8NBR6 621 aa6.34□□□□□ -1.39
VPS13D-209ENST00000487188 RAB2BQ8WUD1 216 aa6.34□□□□□ -1.39
VPS13D-209ENST00000487188 ZNF669Q96BR6 464 aaPredicted RBP6.34□□□□□ -1.39
VPS13D-209ENST00000487188 FBXL20Q96IG2 436 aa6.34□□□□□ -1.39
VPS13D-209ENST00000487188 SPATA17Q96L03 361 aa6.34□□□□□ -1.39
VPS13D-209ENST00000487188 GATA5Q9BWX5 397 aaPredicted RBP6.34□□□□□ -1.39
VPS13D-209ENST00000487188 DGCR6LQ9BY27 220 aa6.34□□□□□ -1.39
VPS13D-209ENST00000487188 SIAEQ9HAT2 523 aa6.34□□□□□ -1.39
VPS13D-209ENST00000487188 SMOXQ9NWM0 555 aa6.34□□□□□ -1.39
VPS13D-209ENST00000487188 NCKIPSDQ9NZQ3 722 aa6.34□□□□□ -1.39
VPS13D-209ENST00000487188 VTI1BQ9UEU0 232 aa6.34□□□□□ -1.39
VPS13D-209ENST00000487188 COL4A1P02462 1669 aa6.34□□□□□ -1.39
VPS13D-209ENST00000487188 ZNF831Q5JPB2 1677 aa6.34□□□□□ -1.39
VPS13D-209ENST00000487188 TRPC5OSA6NMA1 111 aa6.34□□□□□ -1.39
VPS13D-209ENST00000487188 C16orf96A6NNT2 1141 aa6.34□□□□□ -1.39
VPS13D-209ENST00000487188 E7ENX8 843 aa6.34□□□□□ -1.39
VPS13D-209ENST00000487188 SOCS2O14508 198 aa6.34□□□□□ -1.39
VPS13D-209ENST00000487188 SULT1C4O75897 302 aa6.34□□□□□ -1.39
VPS13D-209ENST00000487188 HMGCRP04035 888 aa6.34□□□□□ -1.39
VPS13D-209ENST00000487188 ALDOAP04075 364 aaKnown RBP6.34□□□□□ -1.39
VPS13D-209ENST00000487188 ERVK-10P10266 1014 aa6.34□□□□□ -1.39
VPS13D-209ENST00000487188 PDGFRAP16234 1089 aa6.34□□□□□ -1.39
VPS13D-209ENST00000487188 ACO1P21399 889 aaKnown RBP6.34□□□□□ -1.39
VPS13D-209ENST00000487188 DCKP27707 260 aa6.34□□□□□ -1.39
VPS13D-209ENST00000487188 LRPAP1P30533 357 aa6.34□□□□□ -1.39
VPS13D-209ENST00000487188 GMPRP36959 345 aa6.34□□□□□ -1.39
VPS13D-209ENST00000487188 GLRBP48167 497 aa6.34□□□□□ -1.39
VPS13D-209ENST00000487188 RPS3AP61247 264 aaKnown RBP6.34□□□□□ -1.39
VPS13D-209ENST00000487188 TFAMQ00059 246 aaKnown RBP6.34□□□□□ -1.39
VPS13D-209ENST00000487188 PRKCQQ04759 706 aa6.34□□□□□ -1.39
VPS13D-209ENST00000487188 FASTKQ14296 549 aaKnown RBP6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms