RNA–Protein interactions for RNA: ENST00000485994.5

VPS50-218, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-218ENST00000485994 KDM4CQ9H3R0 1056 aa7.2□□□□□ -1.26
VPS50-218ENST00000485994 ANLNQ9NQW6 1124 aa7.2□□□□□ -1.26
VPS50-218ENST00000485994 DNAAF2Q9NVR5 837 aaKnown RBP7.2□□□□□ -1.26
VPS50-218ENST00000485994 ADAM22Q9P0K1 906 aa7.2□□□□□ -1.26
VPS50-218ENST00000485994 ZNF212Q9UDV6 495 aa7.2□□□□□ -1.26
VPS50-218ENST00000485994 VANGL2Q9ULK5 521 aa7.2□□□□□ -1.26
VPS50-218ENST00000485994 FZD4Q9ULV1 537 aa7.2□□□□□ -1.26
VPS50-218ENST00000485994 HS3ST2Q9Y278 367 aa7.2□□□□□ -1.26
VPS50-218ENST00000485994 ADAMTS9Q9P2N4 1935 aa7.2□□□□□ -1.26
VPS50-218ENST00000485994 PCDH15Q96QU1 1955 aa7.2□□□□□ -1.26
VPS50-218ENST00000485994 TRPM6Q9BX84 2022 aa7.2□□□□□ -1.26
VPS50-218ENST00000485994 SYNJ2BP-COX16A0A087WUM0 186 aa7.19□□□□□ -1.26
VPS50-218ENST00000485994 C4orf47A7E2U8 309 aa7.19□□□□□ -1.26
VPS50-218ENST00000485994 TTC34A8MYJ7 566 aa7.19□□□□□ -1.26
VPS50-218ENST00000485994 PATE3B3GLJ2 98 aa7.19□□□□□ -1.26
VPS50-218ENST00000485994 E9PAM4 449 aa7.19□□□□□ -1.26
VPS50-218ENST00000485994 MCF2LO15068 1137 aa7.19□□□□□ -1.26
VPS50-218ENST00000485994 SLC7A4O43246 635 aa7.19□□□□□ -1.26
VPS50-218ENST00000485994 SIN3BO75182 1162 aa7.19□□□□□ -1.26
VPS50-218ENST00000485994 KCNK5O95279 499 aa7.19□□□□□ -1.26
VPS50-218ENST00000485994 ADH1BP00325 375 aa7.19□□□□□ -1.26
VPS50-218ENST00000485994 ADRB1P08588 477 aa7.19□□□□□ -1.26
VPS50-218ENST00000485994 ZNF883P0CG24 379 aa7.19□□□□□ -1.26
VPS50-218ENST00000485994 GOT1P17174 413 aa7.19□□□□□ -1.26
VPS50-218ENST00000485994 ENGP17813 658 aa7.19□□□□□ -1.26
VPS50-218ENST00000485994 TNFAIP3P21580 790 aa7.19□□□□□ -1.26
VPS50-218ENST00000485994 C5AR1P21730 350 aa7.19□□□□□ -1.26
VPS50-218ENST00000485994 SDC4P31431 198 aa7.19□□□□□ -1.26
VPS50-218ENST00000485994 ACSL1P33121 698 aa7.19□□□□□ -1.26
VPS50-218ENST00000485994 RFC1P35251 1148 aaPredicted RBP7.19□□□□□ -1.26
VPS50-218ENST00000485994 CTSOP43234 321 aaPredicted RBP7.19□□□□□ -1.26
VPS50-218ENST00000485994 CCR5P51681 352 aa7.19□□□□□ -1.26
VPS50-218ENST00000485994 ZNF143P52747 638 aaPredicted RBP7.19□□□□□ -1.26
VPS50-218ENST00000485994 AIF1P55008 147 aa7.19□□□□□ -1.26
VPS50-218ENST00000485994 SCAPQ12770 1279 aa7.19□□□□□ -1.26
VPS50-218ENST00000485994 SEMA3BQ13214 749 aa7.19□□□□□ -1.26
VPS50-218ENST00000485994 HNRNPDQ14103 355 aaKnown RBP7.19□□□□□ -1.26
VPS50-218ENST00000485994 ELAVL3Q14576 367 aaKnown RBP7.19□□□□□ -1.26
VPS50-218ENST00000485994 CST6Q15828 149 aa7.19□□□□□ -1.26
VPS50-218ENST00000485994 TTC31Q49AM3 519 aaPredicted RBP7.19□□□□□ -1.26
VPS50-218ENST00000485994 C6orf118Q5T5N4 469 aa7.19□□□□□ -1.26
VPS50-218ENST00000485994 MANEALQ5VSG8 457 aa7.19□□□□□ -1.26
VPS50-218ENST00000485994 DCAF12L1Q5VU92 463 aa7.19□□□□□ -1.26
VPS50-218ENST00000485994 FAM46CQ5VWP2 391 aa7.19□□□□□ -1.26
VPS50-218ENST00000485994 RNF219Q5W0B1 726 aaPredicted RBP7.19□□□□□ -1.26
VPS50-218ENST00000485994 TCEAL6Q6IPX3 200 aa7.19□□□□□ -1.26
VPS50-218ENST00000485994 WDR59Q6PJI9 974 aa7.19□□□□□ -1.26
VPS50-218ENST00000485994 MMS22LQ6ZRQ5 1243 aa7.19□□□□□ -1.26
VPS50-218ENST00000485994 MON1BQ7L1V2 547 aa7.19□□□□□ -1.26
VPS50-218ENST00000485994 PIP4P1Q86T03 277 aa7.19□□□□□ -1.26
VPS50-218ENST00000485994 MCOLN2Q8IZK6 566 aa7.19□□□□□ -1.26
VPS50-218ENST00000485994 SH2D3CQ8N5H7 860 aa7.19□□□□□ -1.26
VPS50-218ENST00000485994 TMIEQ8NEW7 156 aa7.19□□□□□ -1.26
VPS50-218ENST00000485994 OR52K2Q8NGK3 314 aa7.19□□□□□ -1.26
VPS50-218ENST00000485994 SLC30A5Q8TAD4 765 aa7.19□□□□□ -1.26
VPS50-218ENST00000485994 SYN2Q92777 582 aaPredicted RBP7.19□□□□□ -1.26
VPS50-218ENST00000485994 TCEAL3Q969E4 200 aa7.19□□□□□ -1.26
VPS50-218ENST00000485994 RPL10LQ96L21 214 aaKnown RBP7.19□□□□□ -1.26
VPS50-218ENST00000485994 PCMTD1Q96MG8 357 aaPredicted RBP7.19□□□□□ -1.26
VPS50-218ENST00000485994 HSPA12BQ96MM6 686 aa7.19□□□□□ -1.26
VPS50-218ENST00000485994 NAP1L5Q96NT1 182 aaPredicted RBP7.19□□□□□ -1.26
VPS50-218ENST00000485994 C2orf49Q9BVC5 232 aaPredicted RBP7.19□□□□□ -1.26
VPS50-218ENST00000485994 GPR174Q9BXC1 333 aa7.19□□□□□ -1.26
VPS50-218ENST00000485994 TTYH3Q9C0H2 523 aa7.19□□□□□ -1.26
VPS50-218ENST00000485994 PABPC3Q9H361 631 aaKnown RBP7.19□□□□□ -1.26
VPS50-218ENST00000485994 SMOC1Q9H4F8 434 aa7.19□□□□□ -1.26
VPS50-218ENST00000485994 CD93Q9NPY3 652 aa7.19□□□□□ -1.26
VPS50-218ENST00000485994 COX16Q9P0S2 106 aa7.19□□□□□ -1.26
VPS50-218ENST00000485994 OR12D3Q9UGF7 316 aa7.19□□□□□ -1.26
VPS50-218ENST00000485994 PPM1HQ9ULR3 514 aa7.19□□□□□ -1.26
VPS50-218ENST00000485994 A0A1W2PQJ5 194 aa7.18□□□□□ -1.26
VPS50-218ENST00000485994 MED19A0JLT2 244 aaPredicted RBP7.18□□□□□ -1.26
VPS50-218ENST00000485994 WASH4PA8MWX3 477 aa7.18□□□□□ -1.26
VPS50-218ENST00000485994 EIF3CLB5ME19 914 aaKnown RBP7.18□□□□□ -1.26
VPS50-218ENST00000485994 GOLGA8SH3BPF8 625 aa7.18□□□□□ -1.26
VPS50-218ENST00000485994 BCAT2O15382 392 aaPredicted RBP7.18□□□□□ -1.26
VPS50-218ENST00000485994 DFNA5O60443 496 aa7.18□□□□□ -1.26
VPS50-218ENST00000485994 ZMPSTE24O75844 475 aa7.18□□□□□ -1.26
VPS50-218ENST00000485994 CNTN5O94779 1100 aa7.18□□□□□ -1.26
VPS50-218ENST00000485994 SEMA4FO95754 770 aa7.18□□□□□ -1.26
VPS50-218ENST00000485994 RHOQP17081 205 aa7.18□□□□□ -1.26
VPS50-218ENST00000485994 CD27P26842 260 aa7.18□□□□□ -1.26
VPS50-218ENST00000485994 OR1E1P30953 314 aa7.18□□□□□ -1.26
VPS50-218ENST00000485994 L1CAMP32004 1257 aa7.18□□□□□ -1.26
VPS50-218ENST00000485994 SLC8A1P32418 973 aa7.18□□□□□ -1.26
VPS50-218ENST00000485994 HTR7P34969 479 aa7.18□□□□□ -1.26
VPS50-218ENST00000485994 NUDT1P36639 197 aa7.18□□□□□ -1.26
VPS50-218ENST00000485994 ETFBP38117 255 aa7.18□□□□□ -1.26
VPS50-218ENST00000485994 PBX1P40424 430 aa7.18□□□□□ -1.26
VPS50-218ENST00000485994 MAPKAPK2P49137 400 aa7.18□□□□□ -1.26
VPS50-218ENST00000485994 GALCP54803 685 aa7.18□□□□□ -1.26
VPS50-218ENST00000485994 HDAC4P56524 1084 aa7.18□□□□□ -1.26
VPS50-218ENST00000485994 TPM4P67936 248 aa7.18□□□□□ -1.26
VPS50-218ENST00000485994 SHC2P98077 582 aa7.18□□□□□ -1.26
VPS50-218ENST00000485994 CCDC15Q0P6D6 951 aa7.18□□□□□ -1.26
VPS50-218ENST00000485994 DLG2Q15700 870 aa7.18□□□□□ -1.26
VPS50-218ENST00000485994 ALFQ53S48 1182 aa7.18□□□□□ -1.26
VPS50-218ENST00000485994 C2CD6Q53TS8 623 aa7.18□□□□□ -1.26
VPS50-218ENST00000485994 PPM1JQ5JR12 505 aa7.18□□□□□ -1.26
VPS50-218ENST00000485994 PLEKHA7Q6IQ23 1121 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms