RNA–Protein interactions for RNA: ENST00000485080.6

SREBF1-213, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 1,230 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-213ENST00000485080 LAIR1Q6GTX8 287 aa18.2■□□□□ 0.5
SREBF1-213ENST00000485080 RETSATQ6NUM9 610 aa18.2■□□□□ 0.5
SREBF1-213ENST00000485080 RFX8Q6ZV50 586 aa18.2■□□□□ 0.5
SREBF1-213ENST00000485080 CEP68Q76N32 757 aa18.2■□□□□ 0.5
SREBF1-213ENST00000485080 PGBD3Q8N328 593 aa18.2■□□□□ 0.5
SREBF1-213ENST00000485080 OR7D4Q8NG98 312 aa18.2■□□□□ 0.5
SREBF1-213ENST00000485080 PRCCQ92733 491 aaPredicted RBP18.2■□□□□ 0.5
SREBF1-213ENST00000485080 PTPRN2Q92932 1015 aa18.2■□□□□ 0.5
SREBF1-213ENST00000485080 SIPA1Q96FS4 1042 aa18.2■□□□□ 0.5
SREBF1-213ENST00000485080 NOL6Q9H6R4 1146 aaKnown RBP18.2■□□□□ 0.5
SREBF1-213ENST00000485080 OSGEPQ9NPF4 335 aa18.2■□□□□ 0.5
SREBF1-213ENST00000485080 GPATCH2LQ9NWQ4 482 aa18.2■□□□□ 0.5
SREBF1-213ENST00000485080 SCML1Q9UN30 329 aa18.2■□□□□ 0.5
SREBF1-213ENST00000485080 ZSCAN5CA6NGD5 496 aaPredicted RBP18.19■□□□□ 0.5
SREBF1-213ENST00000485080 EEF2KO00418 725 aaKnown RBP18.19■□□□□ 0.5
SREBF1-213ENST00000485080 GFRA3O60609 400 aa18.19■□□□□ 0.5
SREBF1-213ENST00000485080 SNAP91O60641 907 aa18.19■□□□□ 0.5
SREBF1-213ENST00000485080 SIN3BO75182 1162 aa18.19■□□□□ 0.5
SREBF1-213ENST00000485080 NDUFA10O95299 355 aa18.19■□□□□ 0.5
SREBF1-213ENST00000485080 RARAP10276 462 aa18.19■□□□□ 0.5
SREBF1-213ENST00000485080 TCF4P15884 667 aa18.19■□□□□ 0.5
SREBF1-213ENST00000485080 MRE11P49959 708 aa18.19■□□□□ 0.5
SREBF1-213ENST00000485080 NDST2P52849 883 aa18.19■□□□□ 0.5
SREBF1-213ENST00000485080 DPYSQ14117 519 aa18.19■□□□□ 0.5
SREBF1-213ENST00000485080 ELAVL3Q14576 367 aaKnown RBP18.19■□□□□ 0.5
SREBF1-213ENST00000485080 POLD3Q15054 466 aaPredicted RBP18.19■□□□□ 0.5
SREBF1-213ENST00000485080 SPA17Q15506 151 aa18.19■□□□□ 0.5
SREBF1-213ENST00000485080 PARP15Q460N3 678 aa18.19■□□□□ 0.5
SREBF1-213ENST00000485080 DAB2IPQ5VWQ8 1189 aa18.19■□□□□ 0.5
SREBF1-213ENST00000485080 SLC36A4Q6YBV0 504 aa18.19■□□□□ 0.5
SREBF1-213ENST00000485080 ZNF366Q8N895 744 aa18.19■□□□□ 0.5
SREBF1-213ENST00000485080 NUP205Q92621 2012 aa18.19■□□□□ 0.5
SREBF1-213ENST00000485080 CFAP54Q96N23 3096 aa18.19■□□□□ 0.5
SREBF1-213ENST00000485080 CEP44Q9C0F1 390 aa18.19■□□□□ 0.5
SREBF1-213ENST00000485080 DUSP15Q9H1R2 295 aaPredicted RBP18.19■□□□□ 0.5
SREBF1-213ENST00000485080 ZWILCHQ9H900 591 aa18.19■□□□□ 0.5
SREBF1-213ENST00000485080 ATP13A1Q9HD20 1204 aa18.19■□□□□ 0.5
SREBF1-213ENST00000485080 RCOR3Q9P2K3 495 aaPredicted RBP18.19■□□□□ 0.5
SREBF1-213ENST00000485080 DNAI1Q9UI46 699 aa18.19■□□□□ 0.5
SREBF1-213ENST00000485080 PCDHA13Q9Y5I0 950 aa18.19■□□□□ 0.5
SREBF1-213ENST00000485080 A0A0A6YYK5 440 aaPredicted RBP18.18■□□□□ 0.5
SREBF1-213ENST00000485080 ALOX15BO15296 676 aa18.18■□□□□ 0.5
SREBF1-213ENST00000485080 RHOBTB1O94844 696 aa18.18■□□□□ 0.5
SREBF1-213ENST00000485080 MT-CO1P00395 513 aa18.18■□□□□ 0.5
SREBF1-213ENST00000485080 RETP07949 1114 aa18.18■□□□□ 0.5
SREBF1-213ENST00000485080 SRCP12931 536 aa18.18■□□□□ 0.5
SREBF1-213ENST00000485080 GOT1P17174 413 aa18.18■□□□□ 0.5
SREBF1-213ENST00000485080 OXTRP30559 389 aa18.18■□□□□ 0.5
SREBF1-213ENST00000485080 ACVRL1P37023 503 aa18.18■□□□□ 0.5
SREBF1-213ENST00000485080 GEMIN4P57678 1058 aaKnown RBP18.18■□□□□ 0.5
SREBF1-213ENST00000485080 RPS14P62263 151 aaKnown RBP18.18■□□□□ 0.5
SREBF1-213ENST00000485080 ARF5P84085 180 aa18.18■□□□□ 0.5
SREBF1-213ENST00000485080 DLG2Q15700 870 aa18.18■□□□□ 0.5
SREBF1-213ENST00000485080 KCNT1Q5JUK3 1230 aa18.18■□□□□ 0.5
SREBF1-213ENST00000485080 AFMIDQ63HM1 303 aa18.18■□□□□ 0.5
SREBF1-213ENST00000485080 PMS2CLQ68D20 193 aa18.18■□□□□ 0.5
SREBF1-213ENST00000485080 ZNF776Q68DI1 518 aaPredicted RBP18.18■□□□□ 0.5
SREBF1-213ENST00000485080 TXNRD3NBQ6F5E7 133 aa18.18■□□□□ 0.5
SREBF1-213ENST00000485080 POLNQ7Z5Q5 900 aa18.18■□□□□ 0.5
SREBF1-213ENST00000485080 KBTBD6Q86V97 674 aa18.18■□□□□ 0.5
SREBF1-213ENST00000485080 TMEM139Q8IV31 216 aa18.18■□□□□ 0.5
SREBF1-213ENST00000485080 PLPP6Q8IY26 295 aa18.18■□□□□ 0.5
SREBF1-213ENST00000485080 FAM160A2Q8N612 972 aaPredicted RBP18.18■□□□□ 0.5
SREBF1-213ENST00000485080 TSC1Q92574 1164 aa18.18■□□□□ 0.5
SREBF1-213ENST00000485080 RUBCNQ92622 972 aa18.18■□□□□ 0.5
SREBF1-213ENST00000485080 ISG20Q96AZ6 181 aaKnown RBP18.18■□□□□ 0.5
SREBF1-213ENST00000485080 CALR3Q96L12 384 aaKnown RBP18.18■□□□□ 0.5
SREBF1-213ENST00000485080 FAM129BQ96TA1 746 aa18.18■□□□□ 0.5
SREBF1-213ENST00000485080 BAG1Q99933 345 aaPredicted RBP18.18■□□□□ 0.5
SREBF1-213ENST00000485080 SPON2Q9BUD6 331 aa18.18■□□□□ 0.5
SREBF1-213ENST00000485080 KLC2Q9H0B6 622 aa18.18■□□□□ 0.5
SREBF1-213ENST00000485080 SLC6A17Q9H1V8 727 aa18.18■□□□□ 0.5
SREBF1-213ENST00000485080 LRRC19Q9H756 370 aa18.18■□□□□ 0.5
SREBF1-213ENST00000485080 CWC15Q9P013 229 aaKnown RBP18.18■□□□□ 0.5
SREBF1-213ENST00000485080 MBD1Q9UIS9 605 aaPredicted RBP18.18■□□□□ 0.5
SREBF1-213ENST00000485080 IGHV1OR15-9A0A0B4J2B8 117 aa18.17■□□□□ 0.5
SREBF1-213ENST00000485080 SOWAHDA6NJG2 315 aa18.17■□□□□ 0.5
SREBF1-213ENST00000485080 GOLGA6L6A8MZA4 724 aa18.17■□□□□ 0.5
SREBF1-213ENST00000485080 H3BRJ5 948 aa18.17■□□□□ 0.5
SREBF1-213ENST00000485080 CBX4O00257 560 aa18.17■□□□□ 0.5
SREBF1-213ENST00000485080 DCLK1O15075 740 aa18.17■□□□□ 0.5
SREBF1-213ENST00000485080 KDELR3O43731 214 aa18.17■□□□□ 0.5
SREBF1-213ENST00000485080 RNASEH1O60930 286 aaKnown RBP18.17■□□□□ 0.5
SREBF1-213ENST00000485080 LRP3O75074 770 aa18.17■□□□□ 0.5
SREBF1-213ENST00000485080 CD160O95971 181 aa18.17■□□□□ 0.5
SREBF1-213ENST00000485080 KRT7P08729 469 aa18.17■□□□□ 0.5
SREBF1-213ENST00000485080 SLC1A1P43005 524 aa18.17■□□□□ 0.5
SREBF1-213ENST00000485080 SERPINH1P50454 418 aaKnown RBP18.17■□□□□ 0.5
SREBF1-213ENST00000485080 TPMTP51580 245 aa18.17■□□□□ 0.5
SREBF1-213ENST00000485080 ARSEP51690 589 aa18.17■□□□□ 0.5
SREBF1-213ENST00000485080 GSDMDP57764 484 aa18.17■□□□□ 0.5
SREBF1-213ENST00000485080 SFSWAPQ12872 951 aaKnown RBP18.17■□□□□ 0.5
SREBF1-213ENST00000485080 ELF2Q15723 593 aa18.17■□□□□ 0.5
SREBF1-213ENST00000485080 SMTNL2Q2TAL5 461 aa18.17■□□□□ 0.5
SREBF1-213ENST00000485080 PPP6R3Q5H9R7 873 aaPredicted RBP18.17■□□□□ 0.5
SREBF1-213ENST00000485080 IL31Q6EBC2 164 aa18.17■□□□□ 0.5
SREBF1-213ENST00000485080 KIAA1324Q6UXG2 1013 aaKnown RBP18.17■□□□□ 0.5
SREBF1-213ENST00000485080 PRR23BQ6ZRT6 265 aa18.17■□□□□ 0.5
SREBF1-213ENST00000485080 LZTR1Q8N653 840 aa18.17■□□□□ 0.5
SREBF1-213ENST00000485080 ATP11CQ8NB49 1132 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms