RNA–Protein interactions for RNA: ENST00000483768.1

ZNF561-216, Transcript of zinc finger protein 561, humanhuman

TSL 1 (best)

Gene ZNF561, Length 579 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF561-216ENST00000483768 RRP9O43818 475 aaKnown RBP3.45□□□□□ -1.86
ZNF561-216ENST00000483768 CCNT2O60583 730 aaKnown RBP3.45□□□□□ -1.86
ZNF561-216ENST00000483768 KERAO60938 352 aa3.45□□□□□ -1.86
ZNF561-216ENST00000483768 ITGA10O75578 1167 aa3.45□□□□□ -1.86
ZNF561-216ENST00000483768 KIF20AO95235 890 aa3.45□□□□□ -1.86
ZNF561-216ENST00000483768 CCNDBP1O95273 360 aa3.45□□□□□ -1.86
ZNF561-216ENST00000483768 RASAL1O95294 804 aa3.45□□□□□ -1.86
ZNF561-216ENST00000483768 SNRNP70P08621 437 aaKnown RBP3.45□□□□□ -1.86
ZNF561-216ENST00000483768 WEE2P0C1S8 567 aa3.45□□□□□ -1.86
ZNF561-216ENST00000483768 ZNF888P0CJ79 500 aaPredicted RBP3.45□□□□□ -1.86
ZNF561-216ENST00000483768 PCP11498 1178 aaKnown RBP3.45□□□□□ -1.86
ZNF561-216ENST00000483768 PEPDP12955 493 aa3.45□□□□□ -1.86
ZNF561-216ENST00000483768 P4HA1P13674 534 aa3.45□□□□□ -1.86
ZNF561-216ENST00000483768 EEF1DP29692 281 aaKnown RBP3.45□□□□□ -1.86
ZNF561-216ENST00000483768 CD6P30203 668 aa3.45□□□□□ -1.86
ZNF561-216ENST00000483768 SLC6A4P31645 630 aa3.45□□□□□ -1.86
ZNF561-216ENST00000483768 CSF2RBP32927 897 aa3.45□□□□□ -1.86
ZNF561-216ENST00000483768 GRK5P34947 590 aa3.45□□□□□ -1.86
ZNF561-216ENST00000483768 ACVRL1P37023 503 aa3.45□□□□□ -1.86
ZNF561-216ENST00000483768 PBX3P40426 434 aa3.45□□□□□ -1.86
ZNF561-216ENST00000483768 CAPZA2P47755 286 aa3.45□□□□□ -1.86
ZNF561-216ENST00000483768 RCAN1P53805 252 aa3.45□□□□□ -1.86
ZNF561-216ENST00000483768 CDH15P55291 814 aa3.45□□□□□ -1.86
ZNF561-216ENST00000483768 WNT3AP56704 352 aa3.45□□□□□ -1.86
ZNF561-216ENST00000483768 YBEYP58557 167 aaPredicted RBP3.45□□□□□ -1.86
ZNF561-216ENST00000483768 MXRA7P84157 204 aa3.45□□□□□ -1.86
ZNF561-216ENST00000483768 RNASELQ05823 741 aaKnown RBP3.45□□□□□ -1.86
ZNF561-216ENST00000483768 ATP1A4Q13733 1029 aa3.45□□□□□ -1.86
ZNF561-216ENST00000483768 TNFAIP1Q13829 316 aa3.45□□□□□ -1.86
ZNF561-216ENST00000483768 TRIM29Q14134 588 aa3.45□□□□□ -1.86
ZNF561-216ENST00000483768 IRF3Q14653 427 aa3.45□□□□□ -1.86
ZNF561-216ENST00000483768 RRS1Q15050 365 aaKnown RBP3.45□□□□□ -1.86
ZNF561-216ENST00000483768 ZNF568Q3ZCX4 644 aa3.45□□□□□ -1.86
ZNF561-216ENST00000483768 NRN1LQ496H8 165 aa3.45□□□□□ -1.86
ZNF561-216ENST00000483768 C5orf22Q49AR2 442 aa3.45□□□□□ -1.86
ZNF561-216ENST00000483768 C19orf54Q5BKX5 351 aa3.45□□□□□ -1.86
ZNF561-216ENST00000483768 KRBOX4Q5JUW0 171 aa3.45□□□□□ -1.86
ZNF561-216ENST00000483768 ATXN7L2Q5T6C5 722 aaPredicted RBP3.45□□□□□ -1.86
ZNF561-216ENST00000483768 UBAP2Q5T6F2 1119 aaKnown RBP3.45□□□□□ -1.86
ZNF561-216ENST00000483768 ADALQ6DHV7 355 aa3.45□□□□□ -1.86
ZNF561-216ENST00000483768 TCTN3Q6NUS6 607 aa3.45□□□□□ -1.86
ZNF561-216ENST00000483768 TTI2Q6NXR4 508 aa3.45□□□□□ -1.86
ZNF561-216ENST00000483768 CAVIN1Q6NZI2 390 aaKnown RBP3.45□□□□□ -1.86
ZNF561-216ENST00000483768 INO80CQ6PI98 192 aaPredicted RBP3.45□□□□□ -1.86
ZNF561-216ENST00000483768 SLC30A9Q6PML9 568 aa3.45□□□□□ -1.86
ZNF561-216ENST00000483768 OLFM4Q6UX06 510 aa3.45□□□□□ -1.86
ZNF561-216ENST00000483768 TAS1R1Q7RTX1 841 aa3.45□□□□□ -1.86
ZNF561-216ENST00000483768 USP37Q86T82 979 aa3.45□□□□□ -1.86
ZNF561-216ENST00000483768 SCN4BQ8IWT1 228 aa3.45□□□□□ -1.86
ZNF561-216ENST00000483768 KCNH5Q8NCM2 988 aa3.45□□□□□ -1.86
ZNF561-216ENST00000483768 MDM1Q8TC05 714 aa3.45□□□□□ -1.86
ZNF561-216ENST00000483768 TAF4BQ92750 862 aa3.45□□□□□ -1.86
ZNF561-216ENST00000483768 PTP4A1Q93096 173 aa3.45□□□□□ -1.86
ZNF561-216ENST00000483768 EXOC4Q96A65 974 aa3.45□□□□□ -1.86
ZNF561-216ENST00000483768 ELP4Q96EB1 424 aa3.45□□□□□ -1.86
ZNF561-216ENST00000483768 CAPNS2Q96L46 248 aa3.45□□□□□ -1.86
ZNF561-216ENST00000483768 WDR92Q96MX6 357 aa3.45□□□□□ -1.86
ZNF561-216ENST00000483768 RUNDC3BQ96NL0 473 aa3.45□□□□□ -1.86
ZNF561-216ENST00000483768 GCNAQ96QF7 691 aa3.45□□□□□ -1.86
ZNF561-216ENST00000483768 ADOQ96SZ5 270 aa3.45□□□□□ -1.86
ZNF561-216ENST00000483768 CITED2Q99967 270 aaPredicted RBP3.45□□□□□ -1.86
ZNF561-216ENST00000483768 FAM129AQ9BZQ8 928 aa3.45□□□□□ -1.86
ZNF561-216ENST00000483768 TINAGL1Q9GZM7 467 aaPredicted RBP3.45□□□□□ -1.86
ZNF561-216ENST00000483768 TAOK3Q9H2K8 898 aa3.45□□□□□ -1.86
ZNF561-216ENST00000483768 COPS7BQ9H9Q2 264 aaPredicted RBP3.45□□□□□ -1.86
ZNF561-216ENST00000483768 SEC61A2Q9H9S3 476 aa3.45□□□□□ -1.86
ZNF561-216ENST00000483768 SEMA4BQ9NPR2 832 aaPredicted RBP3.45□□□□□ -1.86
ZNF561-216ENST00000483768 TLR8Q9NR97 1041 aaKnown RBP3.45□□□□□ -1.86
ZNF561-216ENST00000483768 HPF1Q9NWY4 346 aa3.45□□□□□ -1.86
ZNF561-216ENST00000483768 AKAP7Q9P0M2 348 aaPredicted RBP3.45□□□□□ -1.86
ZNF561-216ENST00000483768 CPSF2Q9P2I0 782 aaKnown RBP3.45□□□□□ -1.86
ZNF561-216ENST00000483768 SAE1Q9UBE0 346 aaPredicted RBP3.45□□□□□ -1.86
ZNF561-216ENST00000483768 DNAJB9Q9UBS3 223 aa3.45□□□□□ -1.86
ZNF561-216ENST00000483768 ZNF70Q9UC06 446 aaPredicted RBP3.45□□□□□ -1.86
ZNF561-216ENST00000483768 LIMA1Q9UHB6 759 aaKnown RBP3.45□□□□□ -1.86
ZNF561-216ENST00000483768 SH3BGRL2Q9UJC5 107 aa3.45□□□□□ -1.86
ZNF561-216ENST00000483768 CAPN11Q9UMQ6 739 aa3.45□□□□□ -1.86
ZNF561-216ENST00000483768 RCE1Q9Y256 329 aa3.45□□□□□ -1.86
ZNF561-216ENST00000483768 KCNE2Q9Y6J6 123 aa3.45□□□□□ -1.86
ZNF561-216ENST00000483768 MAP3K19Q56UN5 1328 aa3.44□□□□□ -1.86
ZNF561-216ENST00000483768 KDM3AQ9Y4C1 1321 aa3.44□□□□□ -1.86
ZNF561-216ENST00000483768 NSD3Q9BZ95 1437 aa3.44□□□□□ -1.86
ZNF561-216ENST00000483768 CD163L1Q9NR16 1453 aa3.44□□□□□ -1.86
ZNF561-216ENST00000483768 FAM237BA0A1B0GVD1 139 aa3.44□□□□□ -1.86
ZNF561-216ENST00000483768 KRT87PA6NCN2 255 aa3.44□□□□□ -1.86
ZNF561-216ENST00000483768 LIPT2A6NK58 231 aa3.44□□□□□ -1.86
ZNF561-216ENST00000483768 MYO1GB0I1T2 1018 aa3.44□□□□□ -1.86
ZNF561-216ENST00000483768 BTBD18B2RXH4 712 aa3.44□□□□□ -1.86
ZNF561-216ENST00000483768 PSMA7O14818 248 aa3.44□□□□□ -1.86
ZNF561-216ENST00000483768 TP73O15350 636 aa3.44□□□□□ -1.86
ZNF561-216ENST00000483768 FOXS1O43638 330 aa3.44□□□□□ -1.86
ZNF561-216ENST00000483768 SYNCRIPO60506 623 aaKnown RBP3.44□□□□□ -1.86
ZNF561-216ENST00000483768 GUCY1B2O75343 617 aa3.44□□□□□ -1.86
ZNF561-216ENST00000483768 VPS4BO75351 444 aa3.44□□□□□ -1.86
ZNF561-216ENST00000483768 SLC22A3O75751 556 aa3.44□□□□□ -1.86
ZNF561-216ENST00000483768 PSMD10O75832 226 aa3.44□□□□□ -1.86
ZNF561-216ENST00000483768 PIM1P11309 404 aaPredicted RBP3.44□□□□□ -1.86
ZNF561-216ENST00000483768 GAP43P17677 238 aa3.44□□□□□ -1.86
ZNF561-216ENST00000483768 HLA-DPA1P20036 260 aa3.44□□□□□ -1.86
ZNF561-216ENST00000483768 CPT2P23786 658 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms