RNA–Protein interactions for RNA: ENST00000483275.1

VARS-226, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-226ENST00000483275 UCKL1Q9NWZ5 548 aa14.3□□□□□ -0.12
VARS-226ENST00000483275 HOOK1Q9UJC3 728 aaKnown RBP14.3□□□□□ -0.12
VARS-226ENST00000483275 SLC25A13Q9UJS0 675 aa14.3□□□□□ -0.12
VARS-226ENST00000483275 VPS28Q9UK41 221 aa14.3□□□□□ -0.12
VARS-226ENST00000483275 HS3ST4Q9Y661 456 aa14.3□□□□□ -0.12
VARS-226ENST00000483275 DOCK4Q8N1I0 1966 aa14.3□□□□□ -0.12
VARS-226ENST00000483275 TRPM6Q9BX84 2022 aa14.3□□□□□ -0.12
VARS-226ENST00000483275 SLC31A1O15431 190 aa14.29□□□□□ -0.12
VARS-226ENST00000483275 YKT6O15498 198 aa14.29□□□□□ -0.12
VARS-226ENST00000483275 MED7O43513 233 aa14.29□□□□□ -0.12
VARS-226ENST00000483275 SIGLEC6O43699 453 aa14.29□□□□□ -0.12
VARS-226ENST00000483275 BRINP1O60477 761 aa14.29□□□□□ -0.12
VARS-226ENST00000483275 CNTN5O94779 1100 aa14.29□□□□□ -0.12
VARS-226ENST00000483275 ZNF18P17022 549 aa14.29□□□□□ -0.12
VARS-226ENST00000483275 SLC9A1P19634 815 aa14.29□□□□□ -0.12
VARS-226ENST00000483275 CCR1P32246 355 aa14.29□□□□□ -0.12
VARS-226ENST00000483275 CDK17Q00537 523 aa14.29□□□□□ -0.12
VARS-226ENST00000483275 PAK1Q13153 545 aa14.29□□□□□ -0.12
VARS-226ENST00000483275 TRIM65Q6PJ69 517 aa14.29□□□□□ -0.12
VARS-226ENST00000483275 LINGO4Q6UY18 593 aa14.29□□□□□ -0.12
VARS-226ENST00000483275 KDM7AQ6ZMT4 941 aa14.29□□□□□ -0.12
VARS-226ENST00000483275 PRPF39Q86UA1 669 aaKnown RBP14.29□□□□□ -0.12
VARS-226ENST00000483275 MFSD2AQ8NA29 543 aa14.29□□□□□ -0.12
VARS-226ENST00000483275 GRIN3AQ8TCU5 1115 aa14.29□□□□□ -0.12
VARS-226ENST00000483275 STK32AQ8WU08 396 aa14.29□□□□□ -0.12
VARS-226ENST00000483275 FAM131CQ96AQ9 280 aa14.29□□□□□ -0.12
VARS-226ENST00000483275 TIGD1Q96MW7 591 aa14.29□□□□□ -0.12
VARS-226ENST00000483275 MED15Q96RN5 788 aa14.29□□□□□ -0.12
VARS-226ENST00000483275 TRIM62Q9BVG3 475 aa14.29□□□□□ -0.12
VARS-226ENST00000483275 SIK2Q9H0K1 926 aa14.29□□□□□ -0.12
VARS-226ENST00000483275 TMPRSS4Q9NRS4 437 aa14.29□□□□□ -0.12
VARS-226ENST00000483275 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.29□□□□□ -0.12
VARS-226ENST00000483275 PPM1HQ9ULR3 514 aa14.29□□□□□ -0.12
VARS-226ENST00000483275 OR51B4Q9Y5P0 310 aa14.29□□□□□ -0.12
VARS-226ENST00000483275 ASH1LQ9NR48 2969 aaKnown RBP14.29□□□□□ -0.12
VARS-226ENST00000483275 BICDL2A1A5D9 508 aa14.28□□□□□ -0.12
VARS-226ENST00000483275 I6L893 689 aaPredicted RBP14.28□□□□□ -0.12
VARS-226ENST00000483275 ATP9BO43861 1147 aa14.28□□□□□ -0.12
VARS-226ENST00000483275 RNGTTO60942 597 aaKnown RBP14.28□□□□□ -0.12
VARS-226ENST00000483275 GADD45BO75293 160 aaPredicted RBP14.28□□□□□ -0.12
VARS-226ENST00000483275 PAGE1O75459 146 aa14.28□□□□□ -0.12
VARS-226ENST00000483275 C1QL1O75973 258 aa14.28□□□□□ -0.12
VARS-226ENST00000483275 CKMT2P17540 419 aa14.28□□□□□ -0.12
VARS-226ENST00000483275 RRM1P23921 792 aa14.28□□□□□ -0.12
VARS-226ENST00000483275 RXRGP48443 463 aa14.28□□□□□ -0.12
VARS-226ENST00000483275 PLK1P53350 603 aa14.28□□□□□ -0.12
VARS-226ENST00000483275 CLDN2P57739 230 aa14.28□□□□□ -0.12
VARS-226ENST00000483275 INSM1Q01101 510 aaPredicted RBP14.28□□□□□ -0.12
VARS-226ENST00000483275 SULT2A1Q06520 285 aa14.28□□□□□ -0.12
VARS-226ENST00000483275 CCDC173Q0VFZ6 552 aa14.28□□□□□ -0.12
VARS-226ENST00000483275 SLC12A1Q13621 1099 aa14.28□□□□□ -0.12
VARS-226ENST00000483275 PROX2Q3B8N5 592 aa14.28□□□□□ -0.12
VARS-226ENST00000483275 ALFQ53S48 1182 aa14.28□□□□□ -0.12
VARS-226ENST00000483275 PIP5KL1Q5T9C9 394 aa14.28□□□□□ -0.12
VARS-226ENST00000483275 TTC39BQ5VTQ0 682 aaPredicted RBP14.28□□□□□ -0.12
VARS-226ENST00000483275 OR6B2Q6IFH4 312 aa14.28□□□□□ -0.12
VARS-226ENST00000483275 OLFML1Q6UWY5 402 aa14.28□□□□□ -0.12
VARS-226ENST00000483275 TMC6Q7Z403 805 aa14.28□□□□□ -0.12
VARS-226ENST00000483275 DSG4Q86SJ6 1040 aa14.28□□□□□ -0.12
VARS-226ENST00000483275 TRIM69Q86WT6 500 aa14.28□□□□□ -0.12
VARS-226ENST00000483275 SH2D3CQ8N5H7 860 aa14.28□□□□□ -0.12
VARS-226ENST00000483275 CHST14Q8NCH0 376 aa14.28□□□□□ -0.12
VARS-226ENST00000483275 ARRDC3Q96B67 414 aa14.28□□□□□ -0.12
VARS-226ENST00000483275 PPP1R13BQ96KQ4 1090 aa14.28□□□□□ -0.12
VARS-226ENST00000483275 NOX5Q96PH1 765 aa14.28□□□□□ -0.12
VARS-226ENST00000483275 PSMB7Q99436 277 aa14.28□□□□□ -0.12
VARS-226ENST00000483275 CALN1Q9BXU9 219 aa14.28□□□□□ -0.12
VARS-226ENST00000483275 MUC3BQ9H195 1237 aa14.28□□□□□ -0.12
VARS-226ENST00000483275 TNKS2Q9H2K2 1166 aa14.28□□□□□ -0.12
VARS-226ENST00000483275 PIGVQ9NUD9 493 aa14.28□□□□□ -0.12
VARS-226ENST00000483275 SLC12A6Q9UHW9 1150 aa14.28□□□□□ -0.12
VARS-226ENST00000483275 PCDHB1Q9Y5F3 818 aa14.28□□□□□ -0.12
VARS-226ENST00000483275 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.27□□□□□ -0.13
VARS-226ENST00000483275 A0A1W2PQU0 124 aa14.27□□□□□ -0.13
VARS-226ENST00000483275 C1QTNF3-AMACRE9PGA6 284 aa14.27□□□□□ -0.13
VARS-226ENST00000483275 KPNA3O00505 521 aaPredicted RBP14.27□□□□□ -0.13
VARS-226ENST00000483275 SLC7A4O43246 635 aa14.27□□□□□ -0.13
VARS-226ENST00000483275 SMAD6O43541 496 aaKnown RBP14.27□□□□□ -0.13
VARS-226ENST00000483275 HSF2BPO75031 334 aa14.27□□□□□ -0.13
VARS-226ENST00000483275 DAB1O75553 588 aa14.27□□□□□ -0.13
VARS-226ENST00000483275 ENDOD1O94919 500 aa14.27□□□□□ -0.13
VARS-226ENST00000483275 ADCY5O95622 1261 aa14.27□□□□□ -0.13
VARS-226ENST00000483275 SRCP12931 536 aa14.27□□□□□ -0.13
VARS-226ENST00000483275 GLDCP23378 1020 aa14.27□□□□□ -0.13
VARS-226ENST00000483275 ZNF177Q13360 481 aaPredicted RBP14.27□□□□□ -0.13
VARS-226ENST00000483275 STAT4Q14765 748 aa14.27□□□□□ -0.13
VARS-226ENST00000483275 PTPN20Q4JDL3 420 aa14.27□□□□□ -0.13
VARS-226ENST00000483275 SETMARQ53H47 684 aaPredicted RBP14.27□□□□□ -0.13
VARS-226ENST00000483275 ZNF542PQ5EBM4 170 aa14.27□□□□□ -0.13
VARS-226ENST00000483275 FAM46CQ5VWP2 391 aa14.27□□□□□ -0.13
VARS-226ENST00000483275 SEL1L3Q68CR1 1132 aa14.27□□□□□ -0.13
VARS-226ENST00000483275 TFAP2DQ7Z6R9 452 aa14.27□□□□□ -0.13
VARS-226ENST00000483275 SLC25A45Q8N413 288 aa14.27□□□□□ -0.13
VARS-226ENST00000483275 OR13H1Q8NG92 308 aa14.27□□□□□ -0.13
VARS-226ENST00000483275 FCRL3Q96P31 734 aaPredicted RBP14.27□□□□□ -0.13
VARS-226ENST00000483275 ERVMER34-1Q9H9K5 563 aa14.27□□□□□ -0.13
VARS-226ENST00000483275 VPS51Q9UID3 782 aa14.27□□□□□ -0.13
VARS-226ENST00000483275 COL27A1Q8IZC6 1860 aaPredicted RBP14.27□□□□□ -0.13
VARS-226ENST00000483275 KIF26BQ2KJY2 2108 aa14.26□□□□□ -0.13
VARS-226ENST00000483275 E9PAM4 449 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms