RNA–Protein interactions for RNA: ENST00000482687.5

APTX-225, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-225ENST00000482687 HIC2Q96JB3 615 aa10.66□□□□□ -0.7
APTX-225ENST00000482687 TGS1Q96RS0 853 aaKnown RBP10.66□□□□□ -0.7
APTX-225ENST00000482687 SMC6Q96SB8 1091 aa10.66□□□□□ -0.7
APTX-225ENST00000482687 RAD9AQ99638 391 aa10.66□□□□□ -0.7
APTX-225ENST00000482687 LBHD1Q9BQE6 289 aaPredicted RBP10.66□□□□□ -0.7
APTX-225ENST00000482687 C17orf80Q9BSJ5 609 aa10.66□□□□□ -0.7
APTX-225ENST00000482687 ZBP1Q9H171 429 aa10.66□□□□□ -0.7
APTX-225ENST00000482687 EPB41L1Q9H4G0 881 aa10.66□□□□□ -0.7
APTX-225ENST00000482687 DENND2DQ9H6A0 471 aaPredicted RBP10.66□□□□□ -0.7
APTX-225ENST00000482687 SAR1AQ9NR31 198 aa10.66□□□□□ -0.7
APTX-225ENST00000482687 DNAJC17Q9NVM6 304 aaKnown RBP10.66□□□□□ -0.7
APTX-225ENST00000482687 NDUFA13Q9P0J0 144 aa10.66□□□□□ -0.7
APTX-225ENST00000482687 ZNF212Q9UDV6 495 aa10.66□□□□□ -0.7
APTX-225ENST00000482687 YIPF1Q9Y548 306 aa10.66□□□□□ -0.7
APTX-225ENST00000482687 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.65□□□□□ -0.7
APTX-225ENST00000482687 MFSD11O43934 449 aa10.65□□□□□ -0.7
APTX-225ENST00000482687 PAGE1O75459 146 aa10.65□□□□□ -0.7
APTX-225ENST00000482687 CNPP09543 421 aaKnown RBP10.65□□□□□ -0.7
APTX-225ENST00000482687 TGM2P21980 687 aa10.65□□□□□ -0.7
APTX-225ENST00000482687 DNAJB1P25685 340 aa10.65□□□□□ -0.7
APTX-225ENST00000482687 RBL1P28749 1068 aa10.65□□□□□ -0.7
APTX-225ENST00000482687 PTPN4P29074 926 aa10.65□□□□□ -0.7
APTX-225ENST00000482687 ALDH1A3P47895 512 aa10.65□□□□□ -0.7
APTX-225ENST00000482687 TPI1P60174 286 aa10.65□□□□□ -0.7
APTX-225ENST00000482687 PHEXP78562 749 aa10.65□□□□□ -0.7
APTX-225ENST00000482687 RAB33AQ14088 237 aa10.65□□□□□ -0.7
APTX-225ENST00000482687 TMEM259Q4ZIN3 620 aa10.65□□□□□ -0.7
APTX-225ENST00000482687 IZUMO3Q5VZ72 239 aa10.65□□□□□ -0.7
APTX-225ENST00000482687 PLPP4Q5VZY2 271 aa10.65□□□□□ -0.7
APTX-225ENST00000482687 DRICH1Q6PGQ1 229 aaPredicted RBP10.65□□□□□ -0.7
APTX-225ENST00000482687 TRMT10CQ7L0Y3 403 aaKnown RBP10.65□□□□□ -0.7
APTX-225ENST00000482687 TMC7Q7Z402 723 aa10.65□□□□□ -0.7
APTX-225ENST00000482687 CCDC25Q86WR0 208 aa10.65□□□□□ -0.7
APTX-225ENST00000482687 CCNJLQ8IV13 435 aa10.65□□□□□ -0.7
APTX-225ENST00000482687 ZBTB8BQ8NAP8 495 aaPredicted RBP10.65□□□□□ -0.7
APTX-225ENST00000482687 EPS8L3Q8TE67 593 aaKnown RBP10.65□□□□□ -0.7
APTX-225ENST00000482687 PPP2R3CQ969Q6 453 aa10.65□□□□□ -0.7
APTX-225ENST00000482687 SNF8Q96H20 258 aa10.65□□□□□ -0.7
APTX-225ENST00000482687 ZNF512Q96ME7 567 aaPredicted RBP10.65□□□□□ -0.7
APTX-225ENST00000482687 SLC9A7Q96T83 725 aa10.65□□□□□ -0.7
APTX-225ENST00000482687 TRIM62Q9BVG3 475 aa10.65□□□□□ -0.7
APTX-225ENST00000482687 TLR8Q9NR97 1041 aaKnown RBP10.65□□□□□ -0.7
APTX-225ENST00000482687 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.65□□□□□ -0.7
APTX-225ENST00000482687 OR12D3Q9UGF7 316 aa10.65□□□□□ -0.7
APTX-225ENST00000482687 ANAPC5Q9UJX4 755 aa10.65□□□□□ -0.7
APTX-225ENST00000482687 ITGB1BP2Q9UKP3 347 aa10.65□□□□□ -0.7
APTX-225ENST00000482687 SHROOM3Q8TF72 1996 aa10.65□□□□□ -0.71
APTX-225ENST00000482687 SLC12A8A0AV02 714 aa10.64□□□□□ -0.71
APTX-225ENST00000482687 FAM92AA1XBS5 289 aa10.64□□□□□ -0.71
APTX-225ENST00000482687 KCNN4O15554 427 aa10.64□□□□□ -0.71
APTX-225ENST00000482687 MAP3K7O43318 606 aa10.64□□□□□ -0.71
APTX-225ENST00000482687 PFDN1O60925 122 aa10.64□□□□□ -0.71
APTX-225ENST00000482687 LILRB3O75022 631 aa10.64□□□□□ -0.71
APTX-225ENST00000482687 LYNP07948 512 aa10.64□□□□□ -0.71
APTX-225ENST00000482687 PABPC4LP0CB38 370 aaKnown RBP10.64□□□□□ -0.71
APTX-225ENST00000482687 CTSAP10619 480 aa10.64□□□□□ -0.71
APTX-225ENST00000482687 PIM1P11309 404 aaPredicted RBP10.64□□□□□ -0.71
APTX-225ENST00000482687 ERCC2P18074 760 aa10.64□□□□□ -0.71
APTX-225ENST00000482687 RPL22P35268 128 aaKnown RBP10.64□□□□□ -0.71
APTX-225ENST00000482687 CHKAP35790 457 aa10.64□□□□□ -0.71
APTX-225ENST00000482687 TBX4P57082 545 aa10.64□□□□□ -0.71
APTX-225ENST00000482687 SCAPQ12770 1279 aa10.64□□□□□ -0.71
APTX-225ENST00000482687 CALCOCO2Q13137 446 aa10.64□□□□□ -0.71
APTX-225ENST00000482687 EIF4EBP2Q13542 120 aaPredicted RBP10.64□□□□□ -0.71
APTX-225ENST00000482687 ITGA9Q13797 1035 aa10.64□□□□□ -0.71
APTX-225ENST00000482687 DPYSQ14117 519 aa10.64□□□□□ -0.71
APTX-225ENST00000482687 TAF12Q16514 161 aa10.64□□□□□ -0.71
APTX-225ENST00000482687 SYCP2LQ5T4T6 812 aa10.64□□□□□ -0.71
APTX-225ENST00000482687 UBAP2Q5T6F2 1119 aaKnown RBP10.64□□□□□ -0.71
APTX-225ENST00000482687 RWDD4Q6NW29 188 aaKnown RBP10.64□□□□□ -0.71
APTX-225ENST00000482687 KLC3Q6P597 504 aa10.64□□□□□ -0.71
APTX-225ENST00000482687 PPP1R21Q6ZMI0 780 aa10.64□□□□□ -0.71
APTX-225ENST00000482687 ARHGEF18Q6ZSZ5 1173 aa10.64□□□□□ -0.71
APTX-225ENST00000482687 SYDE1Q6ZW31 735 aaPredicted RBP10.64□□□□□ -0.71
APTX-225ENST00000482687 BEND5Q7L4P6 421 aa10.64□□□□□ -0.71
APTX-225ENST00000482687 C14orf80Q86SX3 495 aa10.64□□□□□ -0.71
APTX-225ENST00000482687 PSTKQ8IV42 348 aaKnown RBP10.64□□□□□ -0.71
APTX-225ENST00000482687 CCDC89Q8N998 374 aa10.64□□□□□ -0.71
APTX-225ENST00000482687 CLP1Q92989 425 aaKnown RBP10.64□□□□□ -0.71
APTX-225ENST00000482687 ART4Q93070 314 aa10.64□□□□□ -0.71
APTX-225ENST00000482687 CATSPER2Q96P56 530 aa10.64□□□□□ -0.71
APTX-225ENST00000482687 LRRC37BQ96QE4 947 aa10.64□□□□□ -0.71
APTX-225ENST00000482687 ZNF184Q99676 751 aaPredicted RBP10.64□□□□□ -0.71
APTX-225ENST00000482687 HTATIP2Q9BUP3 242 aa10.64□□□□□ -0.71
APTX-225ENST00000482687 TMEM165Q9HC07 324 aa10.64□□□□□ -0.71
APTX-225ENST00000482687 ENTPD7Q9NQZ7 604 aa10.64□□□□□ -0.71
APTX-225ENST00000482687 ARHGEF38Q9NXL2 777 aa10.64□□□□□ -0.71
APTX-225ENST00000482687 STX18Q9P2W9 335 aaKnown RBP10.64□□□□□ -0.71
APTX-225ENST00000482687 ACTL7BQ9Y614 415 aa10.64□□□□□ -0.71
APTX-225ENST00000482687 HIDE1A8MVS5 230 aa10.64□□□□□ -0.71
APTX-225ENST00000482687 F5H423 210 aaPredicted RBP10.64□□□□□ -0.71
APTX-225ENST00000482687 TP73O15350 636 aa10.64□□□□□ -0.71
APTX-225ENST00000482687 TCEA3O75764 348 aa10.64□□□□□ -0.71
APTX-225ENST00000482687 LRIG2O94898 1065 aa10.64□□□□□ -0.71
APTX-225ENST00000482687 ITGA2BP08514 1039 aa10.64□□□□□ -0.71
APTX-225ENST00000482687 HMGA1P17096 107 aaKnown RBP10.64□□□□□ -0.71
APTX-225ENST00000482687 EPHB2P29323 1055 aa10.64□□□□□ -0.71
APTX-225ENST00000482687 CCR1P32246 355 aa10.64□□□□□ -0.71
APTX-225ENST00000482687 MAGEA10P43363 369 aaPredicted RBP10.64□□□□□ -0.71
APTX-225ENST00000482687 SEMA3BQ13214 749 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms