RNA–Protein interactions for RNA: ENST00000482272.5

CTDSP1-208, Transcript of CTD small phosphatase 1, humanhuman

TSL 2

Gene CTDSP1, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-208ENST00000482272 SLC7A4O43246 635 aa13.8□□□□□ -0.2
CTDSP1-208ENST00000482272 TNFSF14O43557 240 aa13.8□□□□□ -0.2
CTDSP1-208ENST00000482272 CNTN5O94779 1100 aa13.8□□□□□ -0.2
CTDSP1-208ENST00000482272 RHOCP08134 193 aa13.8□□□□□ -0.2
CTDSP1-208ENST00000482272 CCDC15Q0P6D6 951 aa13.8□□□□□ -0.2
CTDSP1-208ENST00000482272 RAB6CQ53S08 254 aa13.8□□□□□ -0.2
CTDSP1-208ENST00000482272 KCNT1Q5JUK3 1230 aa13.8□□□□□ -0.2
CTDSP1-208ENST00000482272 CDKAL1Q5VV42 579 aa13.8□□□□□ -0.2
CTDSP1-208ENST00000482272 ZNF677Q86XU0 584 aa13.8□□□□□ -0.2
CTDSP1-208ENST00000482272 SH2D3CQ8N5H7 860 aa13.8□□□□□ -0.2
CTDSP1-208ENST00000482272 SERAC1Q96JX3 654 aa13.8□□□□□ -0.2
CTDSP1-208ENST00000482272 CCDC114Q96M63 670 aa13.8□□□□□ -0.2
CTDSP1-208ENST00000482272 TBCBQ99426 244 aa13.8□□□□□ -0.2
CTDSP1-208ENST00000482272 C2orf49Q9BVC5 232 aaPredicted RBP13.8□□□□□ -0.2
CTDSP1-208ENST00000482272 RAB6CQ9H0N0 254 aa13.8□□□□□ -0.2
CTDSP1-208ENST00000482272 PPM1HQ9ULR3 514 aa13.8□□□□□ -0.2
CTDSP1-208ENST00000482272 OR51B4Q9Y5P0 310 aa13.8□□□□□ -0.2
CTDSP1-208ENST00000482272 TPRP12270 2363 aaKnown RBP13.79□□□□□ -0.2
CTDSP1-208ENST00000482272 A0A1B0GTQ1 180 aa13.79□□□□□ -0.2
CTDSP1-208ENST00000482272 GOLGA8CPA6NN73 597 aa13.79□□□□□ -0.2
CTDSP1-208ENST00000482272 GOLGA8SH3BPF8 625 aa13.79□□□□□ -0.2
CTDSP1-208ENST00000482272 BNIP3LO60238 219 aa13.79□□□□□ -0.2
CTDSP1-208ENST00000482272 MAGEC1O60732 1142 aa13.79□□□□□ -0.2
CTDSP1-208ENST00000482272 SRGAP2O75044 1071 aa13.79□□□□□ -0.2
CTDSP1-208ENST00000482272 DRD3P35462 400 aa13.79□□□□□ -0.2
CTDSP1-208ENST00000482272 NUDT1P36639 197 aa13.79□□□□□ -0.2
CTDSP1-208ENST00000482272 ALFQ53S48 1182 aa13.79□□□□□ -0.2
CTDSP1-208ENST00000482272 C6orf118Q5T5N4 469 aa13.79□□□□□ -0.2
CTDSP1-208ENST00000482272 RBM43Q6ZSC3 357 aaKnown RBP13.79□□□□□ -0.2
CTDSP1-208ENST00000482272 ZNF683Q8IZ20 524 aa13.79□□□□□ -0.2
CTDSP1-208ENST00000482272 ATP11CQ8NB49 1132 aa13.79□□□□□ -0.2
CTDSP1-208ENST00000482272 PIP4K2CQ8TBX8 421 aa13.79□□□□□ -0.2
CTDSP1-208ENST00000482272 SLC20A1Q8WUM9 679 aa13.79□□□□□ -0.2
CTDSP1-208ENST00000482272 CPA5Q8WXQ8 436 aa13.79□□□□□ -0.2
CTDSP1-208ENST00000482272 HAPLN3Q96S86 360 aa13.79□□□□□ -0.2
CTDSP1-208ENST00000482272 ELF4Q99607 663 aaPredicted RBP13.79□□□□□ -0.2
CTDSP1-208ENST00000482272 VPS16Q9H269 839 aa13.79□□□□□ -0.2
CTDSP1-208ENST00000482272 GDF3Q9NR23 364 aa13.79□□□□□ -0.2
CTDSP1-208ENST00000482272 SARDHQ9UL12 918 aa13.79□□□□□ -0.2
CTDSP1-208ENST00000482272 BTBD3Q9Y2F9 522 aa13.79□□□□□ -0.2
CTDSP1-208ENST00000482272 EPG5Q9HCE0 2579 aa13.79□□□□□ -0.2
CTDSP1-208ENST00000482272 PKD1L2Q7Z442 2459 aa13.78□□□□□ -0.2
CTDSP1-208ENST00000482272 F8VZ95 297 aa13.78□□□□□ -0.2
CTDSP1-208ENST00000482272 TLR4O00206 839 aa13.78□□□□□ -0.2
CTDSP1-208ENST00000482272 RNF103O00237 685 aa13.78□□□□□ -0.2
CTDSP1-208ENST00000482272 PLK4O00444 970 aa13.78□□□□□ -0.2
CTDSP1-208ENST00000482272 YKT6O15498 198 aa13.78□□□□□ -0.2
CTDSP1-208ENST00000482272 PLRG1O43660 514 aaKnown RBP13.78□□□□□ -0.2
CTDSP1-208ENST00000482272 RTN2O75298 545 aa13.78□□□□□ -0.2
CTDSP1-208ENST00000482272 WNT1P04628 370 aa13.78□□□□□ -0.2
CTDSP1-208ENST00000482272 ITGAVP06756 1048 aa13.78□□□□□ -0.2
CTDSP1-208ENST00000482272 MMEP08473 750 aa13.78□□□□□ -0.2
CTDSP1-208ENST00000482272 ATXN1LP0C7T5 689 aaKnown RBP13.78□□□□□ -0.2
CTDSP1-208ENST00000482272 SRCP12931 536 aa13.78□□□□□ -0.2
CTDSP1-208ENST00000482272 CHRNB2P17787 502 aa13.78□□□□□ -0.2
CTDSP1-208ENST00000482272 OR1E1P30953 314 aa13.78□□□□□ -0.2
CTDSP1-208ENST00000482272 FLT3P36888 993 aa13.78□□□□□ -0.2
CTDSP1-208ENST00000482272 ANP32AP39687 249 aaKnown RBP13.78□□□□□ -0.2
CTDSP1-208ENST00000482272 ARRB1P49407 418 aaPredicted RBP13.78□□□□□ -0.2
CTDSP1-208ENST00000482272 IL9RQ01113 521 aa13.78□□□□□ -0.2
CTDSP1-208ENST00000482272 CNTN1Q12860 1018 aa13.78□□□□□ -0.2
CTDSP1-208ENST00000482272 STAT4Q14765 748 aa13.78□□□□□ -0.2
CTDSP1-208ENST00000482272 KRT31Q15323 416 aa13.78□□□□□ -0.2
CTDSP1-208ENST00000482272 PRAMEF14Q5SWL7 426 aa13.78□□□□□ -0.2
CTDSP1-208ENST00000482272 FKBP15Q5T1M5 1219 aa13.78□□□□□ -0.2
CTDSP1-208ENST00000482272 NAPEPLDQ6IQ20 393 aa13.78□□□□□ -0.2
CTDSP1-208ENST00000482272 CCNI2Q6ZMN8 369 aaPredicted RBP13.78□□□□□ -0.2
CTDSP1-208ENST00000482272 Q6ZVU0 165 aa13.78□□□□□ -0.2
CTDSP1-208ENST00000482272 ARCQ7LC44 396 aa13.78□□□□□ -0.2
CTDSP1-208ENST00000482272 TMPRSS7Q7RTY8 843 aa13.78□□□□□ -0.2
CTDSP1-208ENST00000482272 BNIPLQ7Z465 357 aa13.78□□□□□ -0.2
CTDSP1-208ENST00000482272 GALNT15Q8N3T1 639 aa13.78□□□□□ -0.2
CTDSP1-208ENST00000482272 EPS8L1Q8TE68 723 aa13.78□□□□□ -0.2
CTDSP1-208ENST00000482272 FAM131CQ96AQ9 280 aa13.78□□□□□ -0.2
CTDSP1-208ENST00000482272 TMEM59LQ9UK28 342 aa13.78□□□□□ -0.2
CTDSP1-208ENST00000482272 NOCTQ9UK39 431 aaKnown RBP13.78□□□□□ -0.2
CTDSP1-208ENST00000482272 DMTF1Q9Y222 760 aa13.78□□□□□ -0.2
CTDSP1-208ENST00000482272 HS3ST2Q9Y278 367 aa13.78□□□□□ -0.2
CTDSP1-208ENST00000482272 DAAM1Q9Y4D1 1078 aa13.78□□□□□ -0.2
CTDSP1-208ENST00000482272 BAHCC1Q9P281 2608 aa13.78□□□□□ -0.2
CTDSP1-208ENST00000482272 DOCK4Q8N1I0 1966 aa13.78□□□□□ -0.2
CTDSP1-208ENST00000482272 IGLV3-10A0A075B6K4 115 aa13.77□□□□□ -0.21
CTDSP1-208ENST00000482272 A0A1W2PR77 199 aa13.77□□□□□ -0.21
CTDSP1-208ENST00000482272 SRRM3A6NNA2 597 aaPredicted RBP13.77□□□□□ -0.21
CTDSP1-208ENST00000482272 E9PAM4 449 aa13.77□□□□□ -0.21
CTDSP1-208ENST00000482272 WNT9AO14904 365 aa13.77□□□□□ -0.21
CTDSP1-208ENST00000482272 LATO43561 262 aa13.77□□□□□ -0.21
CTDSP1-208ENST00000482272 GFPT2O94808 682 aa13.77□□□□□ -0.21
CTDSP1-208ENST00000482272 MT-CO1P00395 513 aa13.77□□□□□ -0.21
CTDSP1-208ENST00000482272 CHRNA3P32297 505 aa13.77□□□□□ -0.21
CTDSP1-208ENST00000482272 RECQLP46063 649 aaPredicted RBP13.77□□□□□ -0.21
CTDSP1-208ENST00000482272 CLCN6P51797 869 aa13.77□□□□□ -0.21
CTDSP1-208ENST00000482272 POLR2FP61218 127 aaKnown RBP13.77□□□□□ -0.21
CTDSP1-208ENST00000482272 NOMO3P69849 1222 aa13.77□□□□□ -0.21
CTDSP1-208ENST00000482272 CDR2Q01850 454 aa13.77□□□□□ -0.21
CTDSP1-208ENST00000482272 SCAPQ12770 1279 aa13.77□□□□□ -0.21
CTDSP1-208ENST00000482272 ARL13BQ3SXY8 428 aa13.77□□□□□ -0.21
CTDSP1-208ENST00000482272 NAA35Q5VZE5 725 aa13.77□□□□□ -0.21
CTDSP1-208ENST00000482272 RETSATQ6NUM9 610 aa13.77□□□□□ -0.21
CTDSP1-208ENST00000482272 ZNF783Q6ZMS7 281 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms