RNA–Protein interactions for RNA: ENST00000482217.1

VPS41-212, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 951 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-212ENST00000482217 C16orf96A6NNT2 1141 aa4.32□□□□□ -1.72
VPS41-212ENST00000482217 PLSCR1O15162 318 aa4.32□□□□□ -1.72
VPS41-212ENST00000482217 TRIM24O15164 1050 aa4.32□□□□□ -1.72
VPS41-212ENST00000482217 HNRNPRO43390 633 aaKnown RBP4.32□□□□□ -1.72
VPS41-212ENST00000482217 VEGFDO43915 354 aa4.32□□□□□ -1.72
VPS41-212ENST00000482217 TLR2O60603 784 aa4.32□□□□□ -1.72
VPS41-212ENST00000482217 EXOC3O60645 756 aa4.32□□□□□ -1.72
VPS41-212ENST00000482217 RECQL4O94761 1208 aa4.32□□□□□ -1.72
VPS41-212ENST00000482217 AGFG2O95081 481 aa4.32□□□□□ -1.72
VPS41-212ENST00000482217 NPPAP01160 153 aa4.32□□□□□ -1.72
VPS41-212ENST00000482217 ITGB1P05556 798 aa4.32□□□□□ -1.72
VPS41-212ENST00000482217 CKBP12277 381 aa4.32□□□□□ -1.72
VPS41-212ENST00000482217 PDGFRAP16234 1089 aa4.32□□□□□ -1.72
VPS41-212ENST00000482217 ACRV1P26436 265 aa4.32□□□□□ -1.72
VPS41-212ENST00000482217 ARL3P36405 182 aa4.32□□□□□ -1.72
VPS41-212ENST00000482217 BMPR1AP36894 532 aa4.32□□□□□ -1.72
VPS41-212ENST00000482217 KCNJ5P48544 419 aa4.32□□□□□ -1.72
VPS41-212ENST00000482217 SCNN1GP51170 649 aa4.32□□□□□ -1.72
VPS41-212ENST00000482217 LUMP51884 338 aaPredicted RBP4.32□□□□□ -1.72
VPS41-212ENST00000482217 POLGP54098 1239 aaPredicted RBP4.32□□□□□ -1.72
VPS41-212ENST00000482217 ADARP55265 1226 aaKnown RBP4.32□□□□□ -1.72
VPS41-212ENST00000482217 RPS3AP61247 264 aaKnown RBP4.32□□□□□ -1.72
VPS41-212ENST00000482217 MXRA7P84157 204 aa4.32□□□□□ -1.72
VPS41-212ENST00000482217 NHLH2Q02577 135 aa4.32□□□□□ -1.72
VPS41-212ENST00000482217 PRKCZQ05513 592 aa4.32□□□□□ -1.72
VPS41-212ENST00000482217 TCF15Q12870 199 aa4.32□□□□□ -1.72
VPS41-212ENST00000482217 CRHR2Q13324 411 aa4.32□□□□□ -1.72
VPS41-212ENST00000482217 DCTN2Q13561 401 aaKnown RBP4.32□□□□□ -1.72
VPS41-212ENST00000482217 PRKD1Q15139 912 aaPredicted RBP4.32□□□□□ -1.72
VPS41-212ENST00000482217 SMU1Q2TAY7 513 aa4.32□□□□□ -1.72
VPS41-212ENST00000482217 KRT71Q3SY84 523 aa4.32□□□□□ -1.72
VPS41-212ENST00000482217 AARDQ4LEZ3 155 aa4.32□□□□□ -1.72
VPS41-212ENST00000482217 TOR1AIP1Q5JTV8 583 aa4.32□□□□□ -1.72
VPS41-212ENST00000482217 ERMARDQ5T6L9 678 aa4.32□□□□□ -1.72
VPS41-212ENST00000482217 FAM102AQ5T9C2 384 aaPredicted RBP4.32□□□□□ -1.72
VPS41-212ENST00000482217 AADACL4Q5VUY2 407 aa4.32□□□□□ -1.72
VPS41-212ENST00000482217 METRNLQ641Q3 311 aa4.32□□□□□ -1.72
VPS41-212ENST00000482217 ATG16L1Q676U5 607 aa4.32□□□□□ -1.72
VPS41-212ENST00000482217 ADALQ6DHV7 355 aa4.32□□□□□ -1.72
VPS41-212ENST00000482217 OTOAQ7RTW8 1153 aa4.32□□□□□ -1.72
VPS41-212ENST00000482217 MON1AQ86VX9 555 aa4.32□□□□□ -1.72
VPS41-212ENST00000482217 ARMC8Q8IUR7 673 aa4.32□□□□□ -1.72
VPS41-212ENST00000482217 LRRC49Q8IUZ0 686 aa4.32□□□□□ -1.72
VPS41-212ENST00000482217 CNTN4Q8IWV2 1026 aa4.32□□□□□ -1.72
VPS41-212ENST00000482217 CDH26Q8IXH8 852 aa4.32□□□□□ -1.72
VPS41-212ENST00000482217 WDTC1Q8N5D0 677 aa4.32□□□□□ -1.72
VPS41-212ENST00000482217 CYP2W1Q8TAV3 490 aa4.32□□□□□ -1.72
VPS41-212ENST00000482217 METTL21AQ8WXB1 218 aa4.32□□□□□ -1.72
VPS41-212ENST00000482217 EID2BQ96D98 161 aa4.32□□□□□ -1.72
VPS41-212ENST00000482217 CDCA5Q96FF9 252 aa4.32□□□□□ -1.72
VPS41-212ENST00000482217 PERPQ96FX8 193 aa4.32□□□□□ -1.72
VPS41-212ENST00000482217 NAF1Q96HR8 494 aaKnown RBP4.32□□□□□ -1.72
VPS41-212ENST00000482217 MSLNLQ96KJ4 702 aa4.32□□□□□ -1.72
VPS41-212ENST00000482217 RMDN2Q96LZ7 410 aa4.32□□□□□ -1.72
VPS41-212ENST00000482217 FER1L6-AS2Q96M78 137 aa4.32□□□□□ -1.72
VPS41-212ENST00000482217 CMTM3Q96MX0 182 aa4.32□□□□□ -1.72
VPS41-212ENST00000482217 PKP4Q99569 1192 aa4.32□□□□□ -1.72
VPS41-212ENST00000482217 BCL7BQ9BQE9 202 aa4.32□□□□□ -1.72
VPS41-212ENST00000482217 REEP2Q9BRK0 252 aa4.32□□□□□ -1.72
VPS41-212ENST00000482217 HERC2P3Q9BVR0 1158 aa4.32□□□□□ -1.72
VPS41-212ENST00000482217 TEX13AQ9BXU3 409 aaPredicted RBP4.32□□□□□ -1.72
VPS41-212ENST00000482217 KLHL4Q9C0H6 718 aa4.32□□□□□ -1.72
VPS41-212ENST00000482217 PABPC3Q9H361 631 aaKnown RBP4.32□□□□□ -1.72
VPS41-212ENST00000482217 TAF1DQ9H5J8 278 aaPredicted RBP4.32□□□□□ -1.72
VPS41-212ENST00000482217 TASP1Q9H6P5 420 aa4.32□□□□□ -1.72
VPS41-212ENST00000482217 SERINC1Q9NRX5 453 aa4.32□□□□□ -1.72
VPS41-212ENST00000482217 MORF4L1Q9UBU8 362 aa4.32□□□□□ -1.72
VPS41-212ENST00000482217 LPAR3Q9UBY5 353 aa4.32□□□□□ -1.72
VPS41-212ENST00000482217 BARX2Q9UMQ3 279 aaPredicted RBP4.32□□□□□ -1.72
VPS41-212ENST00000482217 SLC45A2Q9UMX9 530 aa4.32□□□□□ -1.72
VPS41-212ENST00000482217 AURKCQ9UQB9 309 aa4.32□□□□□ -1.72
VPS41-212ENST00000482217 TNFSF13BQ9Y275 285 aa4.32□□□□□ -1.72
VPS41-212ENST00000482217 KLHL20Q9Y2M5 609 aa4.32□□□□□ -1.72
VPS41-212ENST00000482217 CHTOPQ9Y3Y2 248 aaKnown RBP4.32□□□□□ -1.72
VPS41-212ENST00000482217 CLDN16Q9Y5I7 305 aa4.32□□□□□ -1.72
VPS41-212ENST00000482217 CFAP65Q6ZU64 1925 aaKnown RBP4.31□□□□□ -1.72
VPS41-212ENST00000482217 A0A1W2PRV1 198 aa4.31□□□□□ -1.72
VPS41-212ENST00000482217 CCDC78A2IDD5 438 aa4.31□□□□□ -1.72
VPS41-212ENST00000482217 CTAGE15A4D2H0 777 aa4.31□□□□□ -1.72
VPS41-212ENST00000482217 ZNF785A8K8V0 405 aa4.31□□□□□ -1.72
VPS41-212ENST00000482217 GPR89AB7ZAQ6 455 aa4.31□□□□□ -1.72
VPS41-212ENST00000482217 HNRNPDLO14979 420 aaKnown RBP4.31□□□□□ -1.72
VPS41-212ENST00000482217 PGRMC2O15173 223 aa4.31□□□□□ -1.72
VPS41-212ENST00000482217 TP73O15350 636 aa4.31□□□□□ -1.72
VPS41-212ENST00000482217 TGFB1I1O43294 461 aa4.31□□□□□ -1.72
VPS41-212ENST00000482217 PSMD10O75832 226 aa4.31□□□□□ -1.72
VPS41-212ENST00000482217 GGPS1O95749 300 aa4.31□□□□□ -1.72
VPS41-212ENST00000482217 F9P00740 461 aa4.31□□□□□ -1.72
VPS41-212ENST00000482217 TK1P04183 234 aa4.31□□□□□ -1.72
VPS41-212ENST00000482217 SPATA31D3P0C874 917 aa4.31□□□□□ -1.72
VPS41-212ENST00000482217 POLR2MP0CAP2 368 aa4.31□□□□□ -1.72
VPS41-212ENST00000482217 GPR89BP0CG08 455 aa4.31□□□□□ -1.72
VPS41-212ENST00000482217 CTAGE8P0CG41 777 aa4.31□□□□□ -1.72
VPS41-212ENST00000482217 XRCC6P12956 609 aaKnown RBP eCLIP4.31□□□□□ -1.72
VPS41-212ENST00000482217 ARF4P18085 180 aaPredicted RBP4.31□□□□□ -1.72
VPS41-212ENST00000482217 TNFRSF1AP19438 455 aa4.31□□□□□ -1.72
VPS41-212ENST00000482217 RPA1P27694 616 aa4.31□□□□□ -1.72
VPS41-212ENST00000482217 CA8P35219 290 aa4.31□□□□□ -1.72
VPS41-212ENST00000482217 GNL1P36915 607 aaPredicted RBP4.31□□□□□ -1.72
VPS41-212ENST00000482217 PITPNBP48739 271 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms