RNA–Protein interactions for RNA: ENST00000481910.1

HPS4-212, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 1,914 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-212ENST00000481910 WASH4PA8MWX3 477 aa11.87□□□□□ -0.51
HPS4-212ENST00000481910 DCLK1O15075 740 aa11.87□□□□□ -0.51
HPS4-212ENST00000481910 TULP3O75386 442 aa11.87□□□□□ -0.51
HPS4-212ENST00000481910 TJP3O95049 919 aa11.87□□□□□ -0.51
HPS4-212ENST00000481910 FOSL1P15407 271 aa11.87□□□□□ -0.51
HPS4-212ENST00000481910 PRLRP16471 622 aa11.87□□□□□ -0.51
HPS4-212ENST00000481910 SLC6A11P48066 632 aa11.87□□□□□ -0.51
HPS4-212ENST00000481910 SOX9P48436 509 aa11.87□□□□□ -0.51
HPS4-212ENST00000481910 MAPKAPK2P49137 400 aa11.87□□□□□ -0.51
HPS4-212ENST00000481910 AMPD2Q01433 879 aa11.87□□□□□ -0.51
HPS4-212ENST00000481910 FSCBQ5H9T9 825 aa11.87□□□□□ -0.51
HPS4-212ENST00000481910 TJAP1Q5JTD0 557 aa11.87□□□□□ -0.51
HPS4-212ENST00000481910 SLC9A4Q6AI14 798 aa11.87□□□□□ -0.51
HPS4-212ENST00000481910 SETD3Q86TU7 594 aaPredicted RBP11.87□□□□□ -0.51
HPS4-212ENST00000481910 C12orf40Q86WS4 652 aa11.87□□□□□ -0.51
HPS4-212ENST00000481910 ZNF557Q8N988 423 aaPredicted RBP11.87□□□□□ -0.51
HPS4-212ENST00000481910 WFDC5Q8TCV5 224 aa11.87□□□□□ -0.51
HPS4-212ENST00000481910 COG1Q8WTW3 980 aa11.87□□□□□ -0.51
HPS4-212ENST00000481910 SLC2A11Q9BYW1 496 aa11.87□□□□□ -0.51
HPS4-212ENST00000481910 DNAJC17Q9NVM6 304 aaKnown RBP11.87□□□□□ -0.51
HPS4-212ENST00000481910 KIAA1522Q9P206 1035 aaPredicted RBP11.87□□□□□ -0.51
HPS4-212ENST00000481910 ZNF212Q9UDV6 495 aa11.87□□□□□ -0.51
HPS4-212ENST00000481910 DUSP12Q9UNI6 340 aa11.87□□□□□ -0.51
HPS4-212ENST00000481910 MFHAS1Q9Y4C4 1052 aa11.87□□□□□ -0.51
HPS4-212ENST00000481910 UNC80Q8N2C7 3258 aa11.87□□□□□ -0.51
HPS4-212ENST00000481910 E2F6O75461 281 aa11.86□□□□□ -0.51
HPS4-212ENST00000481910 KRT38O76015 456 aa11.86□□□□□ -0.51
HPS4-212ENST00000481910 RHOCP08134 193 aa11.86□□□□□ -0.51
HPS4-212ENST00000481910 ZFXP17010 805 aaPredicted RBP11.86□□□□□ -0.51
HPS4-212ENST00000481910 ZNF24P17028 368 aa11.86□□□□□ -0.51
HPS4-212ENST00000481910 HLA-FP30511 346 aa11.86□□□□□ -0.51
HPS4-212ENST00000481910 PTPN7P35236 360 aa11.86□□□□□ -0.51
HPS4-212ENST00000481910 SERPINB6P35237 376 aa11.86□□□□□ -0.51
HPS4-212ENST00000481910 DGKGP49619 791 aa11.86□□□□□ -0.51
HPS4-212ENST00000481910 GAB4Q2WGN9 574 aa11.86□□□□□ -0.51
HPS4-212ENST00000481910 RNF43Q68DV7 783 aa11.86□□□□□ -0.51
HPS4-212ENST00000481910 NCBP2-AS2Q69YL0 99 aa11.86□□□□□ -0.51
HPS4-212ENST00000481910 CXorf57Q6NSI4 855 aaKnown RBP11.86□□□□□ -0.51
HPS4-212ENST00000481910 CCDC70Q6NSX1 233 aa11.86□□□□□ -0.51
HPS4-212ENST00000481910 ETFBKMTQ8IXQ9 262 aa11.86□□□□□ -0.51
HPS4-212ENST00000481910 UMODL1-AS1Q8N2C9 162 aa11.86□□□□□ -0.51
HPS4-212ENST00000481910 LZTR1Q8N653 840 aa11.86□□□□□ -0.51
HPS4-212ENST00000481910 PLD5Q8N7P1 536 aa11.86□□□□□ -0.51
HPS4-212ENST00000481910 OR52K2Q8NGK3 314 aa11.86□□□□□ -0.51
HPS4-212ENST00000481910 CELF6Q96J87 481 aaKnown RBP11.86□□□□□ -0.51
HPS4-212ENST00000481910 NECAB3Q96P71 396 aaPredicted RBP11.86□□□□□ -0.51
HPS4-212ENST00000481910 HERPUD2Q9BSE4 406 aa11.86□□□□□ -0.51
HPS4-212ENST00000481910 CD320Q9NPF0 282 aa11.86□□□□□ -0.51
HPS4-212ENST00000481910 HOMER3Q9NSC5 361 aa11.86□□□□□ -0.51
HPS4-212ENST00000481910 ABCB8Q9NUT2 735 aa11.86□□□□□ -0.51
HPS4-212ENST00000481910 DEC1Q9P2X7 70 aa11.86□□□□□ -0.51
HPS4-212ENST00000481910 HEY1Q9Y5J3 304 aa11.86□□□□□ -0.51
HPS4-212ENST00000481910 PIAS3Q9Y6X2 628 aa11.86□□□□□ -0.51
HPS4-212ENST00000481910 A0A0D9SEW6 157 aa11.86□□□□□ -0.51
HPS4-212ENST00000481910 ILVBLA1L0T0 632 aa11.86□□□□□ -0.51
HPS4-212ENST00000481910 SPECC1L-ADORA2AF8WAN1 911 aa11.86□□□□□ -0.51
HPS4-212ENST00000481910 TRIM24O15164 1050 aa11.86□□□□□ -0.51
HPS4-212ENST00000481910 ZNF185O15231 689 aa11.86□□□□□ -0.51
HPS4-212ENST00000481910 RAMP2O60895 175 aa11.86□□□□□ -0.51
HPS4-212ENST00000481910 FGGP02679 453 aa11.86□□□□□ -0.51
HPS4-212ENST00000481910 CD70P32970 193 aa11.86□□□□□ -0.51
HPS4-212ENST00000481910 OPRD1P41143 372 aa11.86□□□□□ -0.51
HPS4-212ENST00000481910 NUMBP49757 651 aa11.86□□□□□ -0.51
HPS4-212ENST00000481910 OXCT1P55809 520 aa11.86□□□□□ -0.51
HPS4-212ENST00000481910 LMAN2Q12907 356 aa11.86□□□□□ -0.51
HPS4-212ENST00000481910 KRT72Q14CN4 511 aa11.86□□□□□ -0.51
HPS4-212ENST00000481910 POLD3Q15054 466 aaPredicted RBP11.86□□□□□ -0.51
HPS4-212ENST00000481910 SLC44A4Q53GD3 710 aa11.86□□□□□ -0.51
HPS4-212ENST00000481910 RNF219Q5W0B1 726 aaPredicted RBP11.86□□□□□ -0.51
HPS4-212ENST00000481910 C1orf228Q6PIY5 440 aa11.86□□□□□ -0.51
HPS4-212ENST00000481910 BBS12Q6ZW61 710 aa11.86□□□□□ -0.51
HPS4-212ENST00000481910 RALGPS2Q86X27 583 aaPredicted RBP11.86□□□□□ -0.51
HPS4-212ENST00000481910 NPWQ8N729 165 aa11.86□□□□□ -0.51
HPS4-212ENST00000481910 NETO2Q8NC67 525 aa11.86□□□□□ -0.51
HPS4-212ENST00000481910 P3H4Q92791 437 aa11.86□□□□□ -0.51
HPS4-212ENST00000481910 CHFRQ96EP1 664 aa11.86□□□□□ -0.51
HPS4-212ENST00000481910 KLC2Q9H0B6 622 aa11.86□□□□□ -0.51
HPS4-212ENST00000481910 MUC3BQ9H195 1237 aa11.86□□□□□ -0.51
HPS4-212ENST00000481910 C8orf33Q9H7E9 229 aaPredicted RBP11.86□□□□□ -0.51
HPS4-212ENST00000481910 PSD3Q9NYI0 1048 aa11.86□□□□□ -0.51
HPS4-212ENST00000481910 SPATA7Q9P0W8 599 aa11.86□□□□□ -0.51
HPS4-212ENST00000481910 SAE1Q9UBE0 346 aaPredicted RBP11.86□□□□□ -0.51
HPS4-212ENST00000481910 FBXO10Q9UK96 956 aa11.86□□□□□ -0.51
HPS4-212ENST00000481910 MIA3Q5JRA6 1907 aa11.85□□□□□ -0.51
HPS4-212ENST00000481910 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.85□□□□□ -0.51
HPS4-212ENST00000481910 CES2O00748 559 aa11.85□□□□□ -0.51
HPS4-212ENST00000481910 CCDC159P0C7I6 412 aa11.85□□□□□ -0.51
HPS4-212ENST00000481910 CISD3P0C7P0 127 aa11.85□□□□□ -0.51
HPS4-212ENST00000481910 GLULP15104 373 aa11.85□□□□□ -0.51
HPS4-212ENST00000481910 TGM2P21980 687 aa11.85□□□□□ -0.51
HPS4-212ENST00000481910 MZF1P28698 734 aaPredicted RBP11.85□□□□□ -0.51
HPS4-212ENST00000481910 CTHP32929 405 aa11.85□□□□□ -0.51
HPS4-212ENST00000481910 EIF2DP41214 584 aaKnown RBP11.85□□□□□ -0.51
HPS4-212ENST00000481910 CSKP41240 450 aa11.85□□□□□ -0.51
HPS4-212ENST00000481910 NDST2P52849 883 aa11.85□□□□□ -0.51
HPS4-212ENST00000481910 YBEYP58557 167 aaPredicted RBP11.85□□□□□ -0.51
HPS4-212ENST00000481910 GNA12Q03113 381 aa11.85□□□□□ -0.51
HPS4-212ENST00000481910 PAFAH1B3Q15102 231 aaKnown RBP11.85□□□□□ -0.51
HPS4-212ENST00000481910 LONRF2Q1L5Z9 754 aa11.85□□□□□ -0.51
HPS4-212ENST00000481910 IER5LQ5T953 404 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms