RNA–Protein interactions for RNA: ENST00000481641.1

CLK1-211, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 690 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-211ENST00000481641 TOR4AQ9NXH8 423 aa19.06■□□□□ 0.64
CLK1-211ENST00000481641 APOBEC2Q9Y235 224 aaKnown RBP19.06■□□□□ 0.64
CLK1-211ENST00000481641 PLXNB3Q9ULL4 1909 aa19.06■□□□□ 0.64
CLK1-211ENST00000481641 FAM221BA6H8Z2 402 aa19.05■□□□□ 0.64
CLK1-211ENST00000481641 K7ERQ8 282 aa19.05■□□□□ 0.64
CLK1-211ENST00000481641 VILLO15195 856 aa19.05■□□□□ 0.64
CLK1-211ENST00000481641 GFPT2O94808 682 aa19.05■□□□□ 0.64
CLK1-211ENST00000481641 RHOCP08134 193 aa19.05■□□□□ 0.64
CLK1-211ENST00000481641 CCT8P50990 548 aa19.05■□□□□ 0.64
CLK1-211ENST00000481641 CCR5P51681 352 aa19.05■□□□□ 0.64
CLK1-211ENST00000481641 NOMO3P69849 1222 aa19.05■□□□□ 0.64
CLK1-211ENST00000481641 MTA1Q13330 715 aa19.05■□□□□ 0.64
CLK1-211ENST00000481641 SUZ12Q15022 739 aaKnown RBP19.05■□□□□ 0.64
CLK1-211ENST00000481641 KRT31Q15323 416 aa19.05■□□□□ 0.64
CLK1-211ENST00000481641 RAB6CQ53S08 254 aa19.05■□□□□ 0.64
CLK1-211ENST00000481641 ARTNQ5T4W7 220 aa19.05■□□□□ 0.64
CLK1-211ENST00000481641 TFAP2DQ7Z6R9 452 aa19.05■□□□□ 0.64
CLK1-211ENST00000481641 ENOX1Q8TC92 643 aaKnown RBP19.05■□□□□ 0.64
CLK1-211ENST00000481641 GPT2Q8TD30 523 aa19.05■□□□□ 0.64
CLK1-211ENST00000481641 EPS8L1Q8TE68 723 aa19.05■□□□□ 0.64
CLK1-211ENST00000481641 CFAP57Q96MR6 1250 aa19.05■□□□□ 0.64
CLK1-211ENST00000481641 PPP1R9BQ96SB3 815 aa19.05■□□□□ 0.64
CLK1-211ENST00000481641 RAB6CQ9H0N0 254 aa19.05■□□□□ 0.64
CLK1-211ENST00000481641 TMEM59LQ9UK28 342 aa19.05■□□□□ 0.64
CLK1-211ENST00000481641 A0A0D9SEW6 157 aa19.04■□□□□ 0.64
CLK1-211ENST00000481641 A0A1W2PR77 199 aa19.04■□□□□ 0.64
CLK1-211ENST00000481641 EPHB6O15197 1021 aa19.04■□□□□ 0.64
CLK1-211ENST00000481641 SRGAP2O75044 1071 aa19.04■□□□□ 0.64
CLK1-211ENST00000481641 LSM8O95777 96 aaKnown RBP19.04■□□□□ 0.64
CLK1-211ENST00000481641 SRCP12931 536 aa19.04■□□□□ 0.64
CLK1-211ENST00000481641 MAT2AP31153 395 aaKnown RBP19.04■□□□□ 0.64
CLK1-211ENST00000481641 SCNN1AP37088 669 aa19.04■□□□□ 0.64
CLK1-211ENST00000481641 VASPP50552 380 aaPredicted RBP19.04■□□□□ 0.64
CLK1-211ENST00000481641 POLR2FP61218 127 aaKnown RBP19.04■□□□□ 0.64
CLK1-211ENST00000481641 CNTN1Q12860 1018 aa19.04■□□□□ 0.64
CLK1-211ENST00000481641 CT47A1Q5JQC4 288 aaPredicted RBP19.04■□□□□ 0.64
CLK1-211ENST00000481641 CDKAL1Q5VV42 579 aa19.04■□□□□ 0.64
CLK1-211ENST00000481641 LINGO4Q6UY18 593 aa19.04■□□□□ 0.64
CLK1-211ENST00000481641 CLEC17AQ6ZS10 378 aa19.04■□□□□ 0.64
CLK1-211ENST00000481641 FAM131BQ86XD5 332 aa19.04■□□□□ 0.64
CLK1-211ENST00000481641 MARCH9Q86YJ5 346 aa19.04■□□□□ 0.64
CLK1-211ENST00000481641 GATAD2AQ86YP4 633 aa19.04■□□□□ 0.64
CLK1-211ENST00000481641 EMC1Q8N766 993 aa19.04■□□□□ 0.64
CLK1-211ENST00000481641 PIP4K2CQ8TBX8 421 aa19.04■□□□□ 0.64
CLK1-211ENST00000481641 SERAC1Q96JX3 654 aa19.04■□□□□ 0.64
CLK1-211ENST00000481641 NLRC4Q9NPP4 1024 aa19.04■□□□□ 0.64
CLK1-211ENST00000481641 FAM207AQ9NSI2 230 aaPredicted RBP19.04■□□□□ 0.64
CLK1-211ENST00000481641 VPS51Q9UID3 782 aa19.04■□□□□ 0.64
CLK1-211ENST00000481641 NOCTQ9UK39 431 aaKnown RBP19.04■□□□□ 0.64
CLK1-211ENST00000481641 PPM1HQ9ULR3 514 aa19.04■□□□□ 0.64
CLK1-211ENST00000481641 PTPRBP23467 1997 aa19.04■□□□□ 0.64
CLK1-211ENST00000481641 DMXL2Q8TDJ6 3036 aa19.03■□□□□ 0.64
CLK1-211ENST00000481641 A0A1B0GTQ1 180 aa19.03■□□□□ 0.64
CLK1-211ENST00000481641 TMEM8BA6NDV4 472 aa19.03■□□□□ 0.64
CLK1-211ENST00000481641 DRGXA6NNA5 263 aa19.03■□□□□ 0.64
CLK1-211ENST00000481641 E9PAM4 449 aa19.03■□□□□ 0.64
CLK1-211ENST00000481641 RNF103O00237 685 aa19.03■□□□□ 0.64
CLK1-211ENST00000481641 SMAD6O43541 496 aaKnown RBP19.03■□□□□ 0.64
CLK1-211ENST00000481641 F9P00740 461 aa19.03■□□□□ 0.64
CLK1-211ENST00000481641 CTSLP07711 333 aa19.03■□□□□ 0.64
CLK1-211ENST00000481641 CHRNB2P17787 502 aa19.03■□□□□ 0.64
CLK1-211ENST00000481641 GLDCP23378 1020 aa19.03■□□□□ 0.64
CLK1-211ENST00000481641 RRM1P23921 792 aa19.03■□□□□ 0.64
CLK1-211ENST00000481641 CD38P28907 300 aa19.03■□□□□ 0.64
CLK1-211ENST00000481641 CCDC157Q569K6 752 aa19.03■□□□□ 0.64
CLK1-211ENST00000481641 DSG4Q86SJ6 1040 aa19.03■□□□□ 0.64
CLK1-211ENST00000481641 ATP11CQ8NB49 1132 aa19.03■□□□□ 0.64
CLK1-211ENST00000481641 OR7D4Q8NG98 312 aa19.03■□□□□ 0.64
CLK1-211ENST00000481641 FAM131CQ96AQ9 280 aa19.03■□□□□ 0.64
CLK1-211ENST00000481641 CDC6Q99741 560 aa19.03■□□□□ 0.64
CLK1-211ENST00000481641 METTL5Q9NRN9 209 aaKnown RBP19.03■□□□□ 0.64
CLK1-211ENST00000481641 FANCLQ9NW38 375 aa19.03■□□□□ 0.64
CLK1-211ENST00000481641 DOCK4Q8N1I0 1966 aa19.02■□□□□ 0.64
CLK1-211ENST00000481641 SRRM3A6NNA2 597 aaPredicted RBP19.02■□□□□ 0.64
CLK1-211ENST00000481641 MCF2LO15068 1137 aa19.02■□□□□ 0.64
CLK1-211ENST00000481641 PLRG1O43660 514 aaKnown RBP19.02■□□□□ 0.64
CLK1-211ENST00000481641 PCDHGA12O60330 932 aa19.02■□□□□ 0.64
CLK1-211ENST00000481641 GJB6O95452 261 aa19.02■□□□□ 0.64
CLK1-211ENST00000481641 GRK6P43250 576 aa19.02■□□□□ 0.64
CLK1-211ENST00000481641 KRT83P78385 493 aa19.02■□□□□ 0.64
CLK1-211ENST00000481641 ATP11AP98196 1134 aa19.02■□□□□ 0.64
CLK1-211ENST00000481641 FMO1Q01740 532 aa19.02■□□□□ 0.64
CLK1-211ENST00000481641 SHBQ15464 509 aa19.02■□□□□ 0.64
CLK1-211ENST00000481641 AGBL4Q5VU57 503 aa19.02■□□□□ 0.64
CLK1-211ENST00000481641 FAM46CQ5VWP2 391 aa19.02■□□□□ 0.64
CLK1-211ENST00000481641 LRRC31Q6UY01 552 aa19.02■□□□□ 0.64
CLK1-211ENST00000481641 BNIPLQ7Z465 357 aa19.02■□□□□ 0.64
CLK1-211ENST00000481641 SLC30A5Q8TAD4 765 aa19.02■□□□□ 0.64
CLK1-211ENST00000481641 C1orf74Q96LT6 269 aa19.02■□□□□ 0.64
CLK1-211ENST00000481641 ELF4Q99607 663 aaPredicted RBP19.02■□□□□ 0.64
CLK1-211ENST00000481641 ARHGAP20Q9P2F6 1191 aa19.02■□□□□ 0.64
CLK1-211ENST00000481641 HS3ST2Q9Y278 367 aa19.02■□□□□ 0.64
CLK1-211ENST00000481641 IGLV3-10A0A075B6K4 115 aa19.01■□□□□ 0.63
CLK1-211ENST00000481641 C1QTNF3-AMACRE9PGA6 284 aa19.01■□□□□ 0.63
CLK1-211ENST00000481641 TAF4O00268 1085 aa19.01■□□□□ 0.63
CLK1-211ENST00000481641 LATO43561 262 aa19.01■□□□□ 0.63
CLK1-211ENST00000481641 ENDOD1O94919 500 aa19.01■□□□□ 0.63
CLK1-211ENST00000481641 CYP1A1P04798 512 aaPredicted RBP19.01■□□□□ 0.63
CLK1-211ENST00000481641 ANP32AP39687 249 aaKnown RBP19.01■□□□□ 0.63
CLK1-211ENST00000481641 JAM2P57087 298 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms