RNA–Protein interactions for RNA: ENST00000481453.5

MRPL28-209, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 2

Gene MRPL28, Length 2,229 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-209ENST00000481453 SLC39A13Q96H72 371 aa18.8■□□□□ 0.6
MRPL28-209ENST00000481453 PPP1R12CQ9BZL4 782 aa18.8■□□□□ 0.6
MRPL28-209ENST00000481453 KLHL8Q9P2G9 620 aaPredicted RBP18.8■□□□□ 0.6
MRPL28-209ENST00000481453 SLC27A5Q9Y2P5 690 aa18.8■□□□□ 0.6
MRPL28-209ENST00000481453 MAD1L1Q9Y6D9 718 aa18.8■□□□□ 0.6
MRPL28-209ENST00000481453 SHROOM3Q8TF72 1996 aa18.8■□□□□ 0.6
MRPL28-209ENST00000481453 GREB1Q4ZG55 1949 aa18.8■□□□□ 0.6
MRPL28-209ENST00000481453 C2orf71A6NGG8 1288 aa18.8■□□□□ 0.6
MRPL28-209ENST00000481453 ZBTB24O43167 697 aaPredicted RBP18.8■□□□□ 0.6
MRPL28-209ENST00000481453 MYL2P10916 166 aa18.8■□□□□ 0.6
MRPL28-209ENST00000481453 SARNPP82979 210 aaKnown RBP18.8■□□□□ 0.6
MRPL28-209ENST00000481453 GPR17Q13304 367 aa18.8■□□□□ 0.6
MRPL28-209ENST00000481453 RWDD4Q6NW29 188 aaKnown RBP18.8■□□□□ 0.6
MRPL28-209ENST00000481453 RNF19BQ6ZMZ0 732 aa18.8■□□□□ 0.6
MRPL28-209ENST00000481453 GSDMBQ8TAX9 411 aa18.8■□□□□ 0.6
MRPL28-209ENST00000481453 PRR11Q96HE9 360 aaPredicted RBP18.8■□□□□ 0.6
MRPL28-209ENST00000481453 SERPINB11Q96P15 392 aa18.8■□□□□ 0.6
MRPL28-209ENST00000481453 SLC13A1Q9BZW2 595 aa18.8■□□□□ 0.6
MRPL28-209ENST00000481453 PIH1D1Q9NWS0 290 aaKnown RBP18.8■□□□□ 0.6
MRPL28-209ENST00000481453 PLLPQ9Y342 182 aa18.8■□□□□ 0.6
MRPL28-209ENST00000481453 PCDHA11Q9Y5I1 949 aa18.8■□□□□ 0.6
MRPL28-209ENST00000481453 COL4A6Q14031 1691 aa18.8■□□□□ 0.6
MRPL28-209ENST00000481453 FAM237BA0A1B0GVD1 139 aa18.79■□□□□ 0.6
MRPL28-209ENST00000481453 GYG2O15488 501 aa18.79■□□□□ 0.6
MRPL28-209ENST00000481453 EFEMP2O95967 443 aa18.79■□□□□ 0.6
MRPL28-209ENST00000481453 CPB1P15086 417 aa18.79■□□□□ 0.6
MRPL28-209ENST00000481453 CRADDP78560 199 aa18.79■□□□□ 0.6
MRPL28-209ENST00000481453 OLIG2Q13516 323 aa18.79■□□□□ 0.6
MRPL28-209ENST00000481453 BMPR2Q13873 1038 aa18.79■□□□□ 0.6
MRPL28-209ENST00000481453 ARHGAP36Q6ZRI8 547 aa18.79■□□□□ 0.6
MRPL28-209ENST00000481453 C14orf80Q86SX3 495 aa18.79■□□□□ 0.6
MRPL28-209ENST00000481453 TRIM42Q8IWZ5 723 aa18.79■□□□□ 0.6
MRPL28-209ENST00000481453 ARNTL2Q8WYA1 636 aa18.79■□□□□ 0.6
MRPL28-209ENST00000481453 VWCEQ96DN2 955 aa18.79■□□□□ 0.6
MRPL28-209ENST00000481453 MECRQ9BV79 373 aa18.79■□□□□ 0.6
MRPL28-209ENST00000481453 HS3ST4Q9Y661 456 aa18.79■□□□□ 0.6
MRPL28-209ENST00000481453 WDR27A2RRH5 827 aa18.78■□□□□ 0.6
MRPL28-209ENST00000481453 FAM159BA6NKW6 160 aa18.78■□□□□ 0.6
MRPL28-209ENST00000481453 UGT1A9O60656 530 aa18.78■□□□□ 0.6
MRPL28-209ENST00000481453 KRT38O76015 456 aa18.78■□□□□ 0.6
MRPL28-209ENST00000481453 LMNAP02545 664 aaKnown RBP18.78■□□□□ 0.6
MRPL28-209ENST00000481453 HTR7P34969 479 aa18.78■□□□□ 0.6
MRPL28-209ENST00000481453 TRIM60Q495X7 471 aa18.78■□□□□ 0.6
MRPL28-209ENST00000481453 KCTD11Q693B1 232 aa18.78■□□□□ 0.6
MRPL28-209ENST00000481453 RFWD3Q6PCD5 774 aa18.78■□□□□ 0.6
MRPL28-209ENST00000481453 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.78■□□□□ 0.64e-8■■■■□ 26.4
MRPL28-209ENST00000481453 DEFB128Q7Z7B8 93 aa18.78■□□□□ 0.6
MRPL28-209ENST00000481453 ARMC2Q8NEN0 867 aa18.78■□□□□ 0.6
MRPL28-209ENST00000481453 OXNAD1Q96HP4 312 aaPredicted RBP18.78■□□□□ 0.6
MRPL28-209ENST00000481453 GBA3Q9H227 469 aa18.78■□□□□ 0.6
MRPL28-209ENST00000481453 UGT1A7Q9HAW7 530 aa18.78■□□□□ 0.6
MRPL28-209ENST00000481453 UGT1A10Q9HAW8 530 aa18.78■□□□□ 0.6
MRPL28-209ENST00000481453 UGT1A8Q9HAW9 530 aa18.78■□□□□ 0.6
MRPL28-209ENST00000481453 TLR6Q9Y2C9 796 aa18.78■□□□□ 0.6
MRPL28-209ENST00000481453 GSC2O15499 205 aa18.78■□□□□ 0.6
MRPL28-209ENST00000481453 MTSS1O43312 755 aa18.78■□□□□ 0.6
MRPL28-209ENST00000481453 RFPL1O75677 317 aa18.78■□□□□ 0.6
MRPL28-209ENST00000481453 MOCS2O96007 188 aaPredicted RBP18.78■□□□□ 0.6
MRPL28-209ENST00000481453 CSH1P0DML2 217 aa18.78■□□□□ 0.6
MRPL28-209ENST00000481453 CSH2P0DML3 217 aa18.78■□□□□ 0.6
MRPL28-209ENST00000481453 ESRRAP11474 423 aaPredicted RBP18.78■□□□□ 0.6
MRPL28-209ENST00000481453 MGAT1P26572 445 aa18.78■□□□□ 0.6
MRPL28-209ENST00000481453 YWHAQP27348 245 aa18.78■□□□□ 0.6
MRPL28-209ENST00000481453 TMPRSS15P98073 1019 aa18.78■□□□□ 0.6
MRPL28-209ENST00000481453 NRG1Q02297 640 aaPredicted RBP18.78■□□□□ 0.6
MRPL28-209ENST00000481453 TLE2Q04725 743 aa18.78■□□□□ 0.6
MRPL28-209ENST00000481453 ELAVL2Q12926 359 aaKnown RBP18.78■□□□□ 0.6
MRPL28-209ENST00000481453 KRT72Q14CN4 511 aa18.78■□□□□ 0.6
MRPL28-209ENST00000481453 TEX44Q53QW1 395 aa18.78■□□□□ 0.6
MRPL28-209ENST00000481453 PIK3R6Q5UE93 754 aa18.78■□□□□ 0.6
MRPL28-209ENST00000481453 PRSS55Q6UWB4 352 aaPredicted RBP18.78■□□□□ 0.6
MRPL28-209ENST00000481453 LRRC43Q8N309 656 aa18.78■□□□□ 0.6
MRPL28-209ENST00000481453 ARHGAP18Q8N392 663 aa18.78■□□□□ 0.6
MRPL28-209ENST00000481453 SPPL2BQ8TCT7 592 aa18.78■□□□□ 0.6
MRPL28-209ENST00000481453 NAF1Q96HR8 494 aaKnown RBP18.78■□□□□ 0.6
MRPL28-209ENST00000481453 MLPHQ9BV36 600 aaPredicted RBP18.78■□□□□ 0.6
MRPL28-209ENST00000481453 DCLRE1BQ9H816 532 aa18.78■□□□□ 0.6
MRPL28-209ENST00000481453 NDFIP2Q9NV92 336 aa18.78■□□□□ 0.6
MRPL28-209ENST00000481453 MOCS1Q9NZB8 636 aa18.78■□□□□ 0.6
MRPL28-209ENST00000481453 SDR42E2A6NKP2 422 aa18.77■□□□□ 0.6
MRPL28-209ENST00000481453 FCHO1O14526 889 aa18.77■□□□□ 0.6
MRPL28-209ENST00000481453 FGF10O15520 208 aaPredicted RBP18.77■□□□□ 0.6
MRPL28-209ENST00000481453 AP2A1O95782 977 aa18.77■□□□□ 0.6
MRPL28-209ENST00000481453 HAPLN1P10915 354 aaPredicted RBP18.77■□□□□ 0.6
MRPL28-209ENST00000481453 SESN2P58004 480 aaPredicted RBP18.77■□□□□ 0.6
MRPL28-209ENST00000481453 ATG16L1Q676U5 607 aa18.77■□□□□ 0.6
MRPL28-209ENST00000481453 TTC7BQ86TV6 843 aa18.77■□□□□ 0.6
MRPL28-209ENST00000481453 MCUR1Q96AQ8 359 aa18.77■□□□□ 0.6
MRPL28-209ENST00000481453 E2F7Q96AV8 911 aa18.77■□□□□ 0.6
MRPL28-209ENST00000481453 MTBPQ96DY7 904 aa18.77■□□□□ 0.6
MRPL28-209ENST00000481453 AGAP3Q96P47 875 aa18.77■□□□□ 0.6
MRPL28-209ENST00000481453 TTPALQ9BTX7 342 aa18.77■□□□□ 0.6
MRPL28-209ENST00000481453 TRHDEQ9UKU6 1024 aa18.77■□□□□ 0.6
MRPL28-209ENST00000481453 LRRC42Q9Y546 428 aa18.77■□□□□ 0.6
MRPL28-209ENST00000481453 MRPL42Q9Y6G3 142 aaKnown RBP18.77■□□□□ 0.6
MRPL28-209ENST00000481453 E9PAM4 449 aa18.77■□□□□ 0.59
MRPL28-209ENST00000481453 ADAM12O43184 909 aa18.77■□□□□ 0.59
MRPL28-209ENST00000481453 LUC7L3O95232 432 aaKnown RBP18.77■□□□□ 0.59
MRPL28-209ENST00000481453 NFKB1P19838 968 aa18.77■□□□□ 0.59
MRPL28-209ENST00000481453 CDC25CP30307 473 aa18.77■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms