RNA–Protein interactions for RNA: ENST00000480614.1

VEGFA-212, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 12,167 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-212ENST00000480614 CLN6Q9NWW5 311 aa9.69□□□□□ -0.86
VEGFA-212ENST00000480614 ASTN2O75129 1339 aaPredicted RBP9.69□□□□□ -0.86
VEGFA-212ENST00000480614 FAM205CA6NFA0 338 aa9.69□□□□□ -0.86
VEGFA-212ENST00000480614 ZSCAN5CA6NGD5 496 aaPredicted RBP9.69□□□□□ -0.86
VEGFA-212ENST00000480614 DGKAP23743 735 aa9.69□□□□□ -0.86
VEGFA-212ENST00000480614 TUBP50607 506 aa9.69□□□□□ -0.86
VEGFA-212ENST00000480614 RP9Q8TA86 221 aaKnown RBP9.69□□□□□ -0.86
VEGFA-212ENST00000480614 METTL6Q8TCB7 284 aa9.69□□□□□ -0.86
VEGFA-212ENST00000480614 MYLPFQ96A32 169 aa9.69□□□□□ -0.86
VEGFA-212ENST00000480614 KCNK4Q9NYG8 393 aa9.69□□□□□ -0.86
VEGFA-212ENST00000480614 A0A087X0T9 212 aa9.69□□□□□ -0.86
VEGFA-212ENST00000480614 ZBTB14O43829 449 aa9.69□□□□□ -0.86
VEGFA-212ENST00000480614 SGPL1O95470 568 aa9.69□□□□□ -0.86
VEGFA-212ENST00000480614 FAM228BP0C875 321 aa9.69□□□□□ -0.86
VEGFA-212ENST00000480614 SERPINA4P29622 427 aa9.69□□□□□ -0.86
VEGFA-212ENST00000480614 CHRNA5P30532 468 aa9.69□□□□□ -0.86
VEGFA-212ENST00000480614 ARHGDIBP52566 201 aa9.69□□□□□ -0.86
VEGFA-212ENST00000480614 BACE1P56817 501 aa9.69□□□□□ -0.86
VEGFA-212ENST00000480614 LAMTOR4Q0VGL1 99 aa9.69□□□□□ -0.86
VEGFA-212ENST00000480614 OVGP1Q12889 678 aa9.69□□□□□ -0.86
VEGFA-212ENST00000480614 TRAF3Q13114 568 aa9.69□□□□□ -0.86
VEGFA-212ENST00000480614 FAM126AQ9BYI3 521 aaPredicted RBP9.69□□□□□ -0.86
VEGFA-212ENST00000480614 PXMP2Q9NR77 195 aa9.69□□□□□ -0.86
VEGFA-212ENST00000480614 SLC9A8Q9Y2E8 581 aa9.69□□□□□ -0.86
VEGFA-212ENST00000480614 A0A0G2JLW4 131 aa9.69□□□□□ -0.86
VEGFA-212ENST00000480614 ACSL4O60488 711 aa9.69□□□□□ -0.86
VEGFA-212ENST00000480614 PLEKP08567 350 aaPredicted RBP9.69□□□□□ -0.86
VEGFA-212ENST00000480614 CCR4P51679 360 aa9.69□□□□□ -0.86
VEGFA-212ENST00000480614 RFX4Q33E94 735 aa9.69□□□□□ -0.86
VEGFA-212ENST00000480614 TTC27Q6P3X3 843 aa9.69□□□□□ -0.86
VEGFA-212ENST00000480614 CXXC5Q7LFL8 322 aaKnown RBP9.69□□□□□ -0.86
VEGFA-212ENST00000480614 HAVCR1Q96D42 359 aa9.69□□□□□ -0.86
VEGFA-212ENST00000480614 REXO4Q9GZR2 422 aaKnown RBP9.69□□□□□ -0.86
VEGFA-212ENST00000480614 SPG21Q9NZD8 308 aa9.69□□□□□ -0.86
VEGFA-212ENST00000480614 FSBPO95073 299 aa9.69□□□□□ -0.86
VEGFA-212ENST00000480614 C21orf59P57076 290 aa9.69□□□□□ -0.86
VEGFA-212ENST00000480614 SPIRE1Q08AE8 756 aa9.69□□□□□ -0.86
VEGFA-212ENST00000480614 PACS1Q6VY07 963 aa9.69□□□□□ -0.86
VEGFA-212ENST00000480614 RIPOR1Q6ZS17 1223 aa9.69□□□□□ -0.86
VEGFA-212ENST00000480614 UBASH3BQ8TF42 649 aa9.69□□□□□ -0.86
VEGFA-212ENST00000480614 TAF6LQ9Y6J9 622 aa9.69□□□□□ -0.86
VEGFA-212ENST00000480614 CNTNAP2Q9UHC6 1331 aa9.69□□□□□ -0.86
VEGFA-212ENST00000480614 MMP13P45452 471 aa9.69□□□□□ -0.86
VEGFA-212ENST00000480614 SEC24CP53992 1094 aa9.69□□□□□ -0.86
VEGFA-212ENST00000480614 PAPD7Q5XG87 772 aaKnown RBP9.69□□□□□ -0.86
VEGFA-212ENST00000480614 FAM83AQ86UY5 434 aa9.69□□□□□ -0.86
VEGFA-212ENST00000480614 FAM20CQ8IXL6 584 aa9.69□□□□□ -0.86
VEGFA-212ENST00000480614 CLUHO75153 1309 aa9.69□□□□□ -0.86
VEGFA-212ENST00000480614 DHRSXQ8N5I4 330 aa9.69□□□□□ -0.86
VEGFA-212ENST00000480614 GPR1P46091 355 aa9.69□□□□□ -0.86
VEGFA-212ENST00000480614 GMFBP60983 142 aa9.69□□□□□ -0.86
VEGFA-212ENST00000480614 ARMC12Q5T9G4 340 aa9.69□□□□□ -0.86
VEGFA-212ENST00000480614 LRRC74BQ6ZQY2 392 aa9.69□□□□□ -0.86
VEGFA-212ENST00000480614 NBPF15Q8N660 670 aa9.69□□□□□ -0.86
VEGFA-212ENST00000480614 SLC16A10Q8TF71 515 aa9.69□□□□□ -0.86
VEGFA-212ENST00000480614 DPF2Q92785 391 aa9.69□□□□□ -0.86
VEGFA-212ENST00000480614 C2orf49Q9BVC5 232 aaPredicted RBP9.69□□□□□ -0.86
VEGFA-212ENST00000480614 FUT8Q9BYC5 575 aa9.69□□□□□ -0.86
VEGFA-212ENST00000480614 NUAK2Q9H093 628 aa9.69□□□□□ -0.86
VEGFA-212ENST00000480614 MFHAS1Q9Y4C4 1052 aa9.69□□□□□ -0.86
VEGFA-212ENST00000480614 CHADO15335 359 aa9.69□□□□□ -0.86
VEGFA-212ENST00000480614 CATP04040 527 aaKnown RBP9.69□□□□□ -0.86
VEGFA-212ENST00000480614 BGNP21810 368 aa9.69□□□□□ -0.86
VEGFA-212ENST00000480614 RPL9P32969 192 aaKnown RBP9.69□□□□□ -0.86
VEGFA-212ENST00000480614 TUFMP49411 452 aaKnown RBP9.69□□□□□ -0.86
VEGFA-212ENST00000480614 TTPAP49638 278 aa9.69□□□□□ -0.86
VEGFA-212ENST00000480614 RSL24D1Q9UHA3 163 aaKnown RBP9.69□□□□□ -0.86
VEGFA-212ENST00000480614 GGA2Q9UJY4 613 aa9.69□□□□□ -0.86
VEGFA-212ENST00000480614 PIK3C2BO00750 1634 aa9.69□□□□□ -0.86
VEGFA-212ENST00000480614 ZNF621Q6ZSS3 439 aa9.68□□□□□ -0.86
VEGFA-212ENST00000480614 C8orf59Q8N0T1 100 aaPredicted RBP9.68□□□□□ -0.86
VEGFA-212ENST00000480614 C15orf41Q9Y2V0 281 aa9.68□□□□□ -0.86
VEGFA-212ENST00000480614 GSAPA4D1B5 854 aa9.68□□□□□ -0.86
VEGFA-212ENST00000480614 MFN2O95140 757 aa9.68□□□□□ -0.86
VEGFA-212ENST00000480614 ALOX12P18054 663 aa9.68□□□□□ -0.86
VEGFA-212ENST00000480614 THOP1P52888 689 aa9.68□□□□□ -0.86
VEGFA-212ENST00000480614 GIT2Q14161 759 aa9.68□□□□□ -0.86
VEGFA-212ENST00000480614 GLRA4Q5JXX5 417 aa9.68□□□□□ -0.86
VEGFA-212ENST00000480614 ZNF549Q6P9A3 640 aa9.68□□□□□ -0.86
VEGFA-212ENST00000480614 TRPV3Q8NET8 790 aa9.68□□□□□ -0.86
VEGFA-212ENST00000480614 ST3GAL5Q9UNP4 418 aa9.68□□□□□ -0.86
VEGFA-212ENST00000480614 CCDC162PA2VCL2 907 aa9.68□□□□□ -0.86
VEGFA-212ENST00000480614 ZBTB22O15209 634 aa9.68□□□□□ -0.86
VEGFA-212ENST00000480614 COX7A2P14406 83 aa9.68□□□□□ -0.86
VEGFA-212ENST00000480614 CAPGP40121 348 aa9.68□□□□□ -0.86
VEGFA-212ENST00000480614 AMHR2Q16671 573 aa9.68□□□□□ -0.86
VEGFA-212ENST00000480614 NAIF1Q69YI7 327 aaPredicted RBP9.68□□□□□ -0.86
VEGFA-212ENST00000480614 NKAPQ8N5F7 415 aaKnown RBP9.68□□□□□ -0.86
VEGFA-212ENST00000480614 SNRNP27Q8WVK2 155 aaKnown RBP9.68□□□□□ -0.86
VEGFA-212ENST00000480614 WDR60Q8WVS4 1066 aa9.68□□□□□ -0.86
VEGFA-212ENST00000480614 ATG4AQ8WYN0 398 aa9.68□□□□□ -0.86
VEGFA-212ENST00000480614 ATP13A1Q9HD20 1204 aa9.68□□□□□ -0.86
VEGFA-212ENST00000480614 SERPINB7O75635 380 aa9.68□□□□□ -0.86
VEGFA-212ENST00000480614 EIF3MQ7L2H7 374 aaKnown RBP9.68□□□□□ -0.86
VEGFA-212ENST00000480614 CSGALNACT1Q8TDX6 532 aa9.68□□□□□ -0.86
VEGFA-212ENST00000480614 TMEM121Q9BTD3 319 aa9.68□□□□□ -0.86
VEGFA-212ENST00000480614 ERGIC3Q9Y282 383 aa9.68□□□□□ -0.86
VEGFA-212ENST00000480614 IRAK3Q9Y616 596 aa9.68□□□□□ -0.86
VEGFA-212ENST00000480614 MFSD7Q6UXD7 560 aa9.68□□□□□ -0.86
VEGFA-212ENST00000480614 EIF1ADQ8N9N8 165 aaKnown RBP9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms