RNA–Protein interactions for RNA: ENST00000480102.1

PTCD3-213, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-213ENST00000480102 ERBB2P04626 1255 aa5.09□□□□□ -1.59
PTCD3-213ENST00000480102 CYP1A1P04798 512 aaPredicted RBP5.09□□□□□ -1.59
PTCD3-213ENST00000480102 CYP17A1P05093 508 aa5.09□□□□□ -1.59
PTCD3-213ENST00000480102 MBL2P11226 248 aaPredicted RBP5.09□□□□□ -1.59
PTCD3-213ENST00000480102 GZMAP12544 262 aa5.09□□□□□ -1.59
PTCD3-213ENST00000480102 CD19P15391 556 aa5.09□□□□□ -1.59
PTCD3-213ENST00000480102 MMP8P22894 467 aa5.09□□□□□ -1.59
PTCD3-213ENST00000480102 ADORA2BP29275 332 aa5.09□□□□□ -1.59
PTCD3-213ENST00000480102 HOXD12P35452 270 aa5.09□□□□□ -1.59
PTCD3-213ENST00000480102 KRT9P35527 623 aa5.09□□□□□ -1.59
PTCD3-213ENST00000480102 OPRD1P41143 372 aa5.09□□□□□ -1.59
PTCD3-213ENST00000480102 ETV3P41162 512 aa5.09□□□□□ -1.59
PTCD3-213ENST00000480102 PRKCIP41743 596 aa5.09□□□□□ -1.59
PTCD3-213ENST00000480102 STAT1P42224 750 aa5.09□□□□□ -1.59
PTCD3-213ENST00000480102 KIR2DL1P43626 348 aaPredicted RBP5.09□□□□□ -1.59
PTCD3-213ENST00000480102 KIR3DL1P43629 444 aa5.09□□□□□ -1.59
PTCD3-213ENST00000480102 CXCL12P48061 93 aa5.09□□□□□ -1.59
PTCD3-213ENST00000480102 SLC11A2P49281 568 aa5.09□□□□□ -1.59
PTCD3-213ENST00000480102 DGKEP52429 567 aa5.09□□□□□ -1.59
PTCD3-213ENST00000480102 COPB1P53618 953 aaKnown RBP5.09□□□□□ -1.59
PTCD3-213ENST00000480102 RACK1P63244 317 aaKnown RBP5.09□□□□□ -1.59
PTCD3-213ENST00000480102 TPM4P67936 248 aa5.09□□□□□ -1.59
PTCD3-213ENST00000480102 ADIGQ0VDE8 80 aa5.09□□□□□ -1.59
PTCD3-213ENST00000480102 IKZF1Q13422 519 aa5.09□□□□□ -1.59
PTCD3-213ENST00000480102 SLC12A1Q13621 1099 aa5.09□□□□□ -1.59
PTCD3-213ENST00000480102 DMC1Q14565 340 aa5.09□□□□□ -1.59
PTCD3-213ENST00000480102 IQCB1Q15051 598 aa5.09□□□□□ -1.59
PTCD3-213ENST00000480102 GOLGA7BQ2TAP0 167 aa5.09□□□□□ -1.59
PTCD3-213ENST00000480102 C5orf22Q49AR2 442 aa5.09□□□□□ -1.59
PTCD3-213ENST00000480102 FILIP1LQ4L180 1135 aa5.09□□□□□ -1.59
PTCD3-213ENST00000480102 MPPE1Q53F39 396 aa5.09□□□□□ -1.59
PTCD3-213ENST00000480102 ZNF394Q53GI3 561 aa5.09□□□□□ -1.59
PTCD3-213ENST00000480102 FYB2Q5VWT5 728 aa5.09□□□□□ -1.59
PTCD3-213ENST00000480102 BTBD8Q5XKL5 378 aa5.09□□□□□ -1.59
PTCD3-213ENST00000480102 FBXL19Q6PCT2 694 aa5.09□□□□□ -1.59
PTCD3-213ENST00000480102 C11orf57Q6ZUT1 292 aaPredicted RBP5.09□□□□□ -1.59
PTCD3-213ENST00000480102 RRAGAQ7L523 313 aa5.09□□□□□ -1.59
PTCD3-213ENST00000480102 CDH24Q86UP0 819 aa5.09□□□□□ -1.59
PTCD3-213ENST00000480102 LONP2Q86WA8 852 aa5.09□□□□□ -1.59
PTCD3-213ENST00000480102 RASSF3Q86WH2 238 aa5.09□□□□□ -1.59
PTCD3-213ENST00000480102 ARHGEF19Q8IW93 802 aa5.09□□□□□ -1.59
PTCD3-213ENST00000480102 TERB1Q8NA31 727 aa5.09□□□□□ -1.59
PTCD3-213ENST00000480102 FAM13CQ8NE31 585 aa5.09□□□□□ -1.59
PTCD3-213ENST00000480102 DNAJB8Q8NHS0 232 aa5.09□□□□□ -1.59
PTCD3-213ENST00000480102 IPO4Q8TEX9 1081 aaKnown RBP5.09□□□□□ -1.59
PTCD3-213ENST00000480102 CYB5D2Q8WUJ1 264 aa5.09□□□□□ -1.59
PTCD3-213ENST00000480102 SECISBP2LQ93073 1101 aaKnown RBP5.09□□□□□ -1.59
PTCD3-213ENST00000480102 FAM122AQ96E09 287 aa5.09□□□□□ -1.59
PTCD3-213ENST00000480102 ZC3H10Q96K80 434 aaKnown RBP5.09□□□□□ -1.59
PTCD3-213ENST00000480102 PPP1R13BQ96KQ4 1090 aa5.09□□□□□ -1.59
PTCD3-213ENST00000480102 C1orf74Q96LT6 269 aa5.09□□□□□ -1.59
PTCD3-213ENST00000480102 PPP1R9BQ96SB3 815 aa5.09□□□□□ -1.59
PTCD3-213ENST00000480102 CYP2S1Q96SQ9 504 aa5.09□□□□□ -1.59
PTCD3-213ENST00000480102 EIF3CQ99613 913 aaKnown RBP5.09□□□□□ -1.59
PTCD3-213ENST00000480102 NCAPGQ9BPX3 1015 aa5.09□□□□□ -1.59
PTCD3-213ENST00000480102 SYT11Q9BT88 431 aa5.09□□□□□ -1.59
PTCD3-213ENST00000480102 NUP58Q9BVL2 599 aa5.09□□□□□ -1.59
PTCD3-213ENST00000480102 GANQ9H2C0 597 aa5.09□□□□□ -1.59
PTCD3-213ENST00000480102 EBF3Q9H4W6 596 aa5.09□□□□□ -1.59
PTCD3-213ENST00000480102 MMRN2Q9H8L6 949 aa5.09□□□□□ -1.59
PTCD3-213ENST00000480102 NMUR1Q9HB89 426 aa5.09□□□□□ -1.59
PTCD3-213ENST00000480102 POPDC2Q9HBU9 364 aa5.09□□□□□ -1.59
PTCD3-213ENST00000480102 MBNL3Q9NUK0 354 aaKnown RBP5.09□□□□□ -1.59
PTCD3-213ENST00000480102 FANCLQ9NW38 375 aa5.09□□□□□ -1.59
PTCD3-213ENST00000480102 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.09□□□□□ -1.59
PTCD3-213ENST00000480102 GTSE1Q9NYZ3 720 aa5.09□□□□□ -1.59
PTCD3-213ENST00000480102 AIPL1Q9NZN9 384 aa5.09□□□□□ -1.59
PTCD3-213ENST00000480102 CFAP97Q9P2B7 532 aa5.09□□□□□ -1.59
PTCD3-213ENST00000480102 DEC1Q9P2X7 70 aa5.09□□□□□ -1.59
PTCD3-213ENST00000480102 NOCTQ9UK39 431 aaKnown RBP5.09□□□□□ -1.59
PTCD3-213ENST00000480102 DNAJC12Q9UKB3 198 aa5.09□□□□□ -1.59
PTCD3-213ENST00000480102 CA14Q9ULX7 337 aa5.09□□□□□ -1.59
PTCD3-213ENST00000480102 SH3BP1Q9Y3L3 701 aa5.09□□□□□ -1.59
PTCD3-213ENST00000480102 ST14Q9Y5Y6 855 aa5.09□□□□□ -1.59
PTCD3-213ENST00000480102 BZW2Q9Y6E2 419 aaKnown RBP5.09□□□□□ -1.59
PTCD3-213ENST00000480102 F5P12259 2224 aa5.08□□□□□ -1.6
PTCD3-213ENST00000480102 MYH11P35749 1972 aa5.08□□□□□ -1.6
PTCD3-213ENST00000480102 FAM86C2PA6NEL3 165 aa5.08□□□□□ -1.6
PTCD3-213ENST00000480102 YJEFN3A6XGL0 299 aa5.08□□□□□ -1.6
PTCD3-213ENST00000480102 UPK3BL1B0FP48 263 aa5.08□□□□□ -1.6
PTCD3-213ENST00000480102 UPK3BL2E5RIL1 263 aa5.08□□□□□ -1.6
PTCD3-213ENST00000480102 E7ENQ6 273 aa5.08□□□□□ -1.6
PTCD3-213ENST00000480102 K7ESF4 209 aa5.08□□□□□ -1.6
PTCD3-213ENST00000480102 M0QYV0 167 aa5.08□□□□□ -1.6
PTCD3-213ENST00000480102 KAT7O95251 611 aa5.08□□□□□ -1.6
PTCD3-213ENST00000480102 HTR3BO95264 441 aa5.08□□□□□ -1.6
PTCD3-213ENST00000480102 CBX7O95931 251 aa5.08□□□□□ -1.6
PTCD3-213ENST00000480102 IGLV3-19P01714 112 aa5.08□□□□□ -1.6
PTCD3-213ENST00000480102 KLKB1P03952 638 aa5.08□□□□□ -1.6
PTCD3-213ENST00000480102 CYBBP04839 570 aa5.08□□□□□ -1.6
PTCD3-213ENST00000480102 FYNP06241 537 aa5.08□□□□□ -1.6
PTCD3-213ENST00000480102 TPM3P06753 285 aa5.08□□□□□ -1.6
PTCD3-213ENST00000480102 SP9P0CG40 484 aa5.08□□□□□ -1.6
PTCD3-213ENST00000480102 UNGP13051 313 aaPredicted RBP5.08□□□□□ -1.6
PTCD3-213ENST00000480102 ATP1A3P13637 1013 aa5.08□□□□□ -1.6
PTCD3-213ENST00000480102 KRT5P13647 590 aa5.08□□□□□ -1.6
PTCD3-213ENST00000480102 FERP16591 822 aa5.08□□□□□ -1.6
PTCD3-213ENST00000480102 JUNBP17275 347 aaPredicted RBP5.08□□□□□ -1.6
PTCD3-213ENST00000480102 HOXC13P31276 330 aa5.08□□□□□ -1.6
PTCD3-213ENST00000480102 HNRNPH3P31942 346 aaKnown RBP5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms