RNA–Protein interactions for RNA: ENST00000479941.1

ATG4B-219, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 374 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-219ENST00000479941 FNTBP49356 437 aa11.08□□□□□ -0.64
ATG4B-219ENST00000479941 STK19P49842 368 aaPredicted RBP11.08□□□□□ -0.64
ATG4B-219ENST00000479941 ARSEP51690 589 aa11.08□□□□□ -0.64
ATG4B-219ENST00000479941 CLCN6P51797 869 aa11.08□□□□□ -0.64
ATG4B-219ENST00000479941 GEMIN4P57678 1058 aaKnown RBP11.08□□□□□ -0.64
ATG4B-219ENST00000479941 CAMK2GQ13555 558 aaPredicted RBP11.08□□□□□ -0.64
ATG4B-219ENST00000479941 DPYSQ14117 519 aa11.08□□□□□ -0.64
ATG4B-219ENST00000479941 IFI16Q16666 785 aaKnown RBP11.08□□□□□ -0.64
ATG4B-219ENST00000479941 ATP13A4Q4VNC1 1196 aa11.08□□□□□ -0.64
ATG4B-219ENST00000479941 ZFYVE27Q5T4F4 411 aa11.08□□□□□ -0.64
ATG4B-219ENST00000479941 HEATR6Q6AI08 1181 aaKnown RBP11.08□□□□□ -0.64
ATG4B-219ENST00000479941 KIAA1211LQ6NV74 962 aa11.08□□□□□ -0.64
ATG4B-219ENST00000479941 SH2D3CQ8N5H7 860 aa11.08□□□□□ -0.64
ATG4B-219ENST00000479941 ATP11CQ8NB49 1132 aa11.08□□□□□ -0.64
ATG4B-219ENST00000479941 MDGA1Q8NFP4 955 aa11.08□□□□□ -0.64
ATG4B-219ENST00000479941 OR2T3Q8NH03 318 aa11.08□□□□□ -0.64
ATG4B-219ENST00000479941 TPCN2Q8NHX9 752 aa11.08□□□□□ -0.64
ATG4B-219ENST00000479941 HMGB4Q8WW32 186 aa11.08□□□□□ -0.64
ATG4B-219ENST00000479941 CSPG4P5Q96PW8 444 aa11.08□□□□□ -0.64
ATG4B-219ENST00000479941 ZNF670Q9BS34 389 aa11.08□□□□□ -0.64
ATG4B-219ENST00000479941 LACRTQ9GZZ8 138 aa11.08□□□□□ -0.64
ATG4B-219ENST00000479941 ADGRG1Q9Y653 693 aa11.08□□□□□ -0.64
ATG4B-219ENST00000479941 USP34Q70CQ2 3546 aa11.08□□□□□ -0.64
ATG4B-219ENST00000479941 FRYLO94915 3013 aa11.07□□□□□ -0.64
ATG4B-219ENST00000479941 ZSCAN5CA6NGD5 496 aaPredicted RBP11.07□□□□□ -0.64
ATG4B-219ENST00000479941 TTC34A8MYJ7 566 aa11.07□□□□□ -0.64
ATG4B-219ENST00000479941 RASA4BC9J798 803 aa11.07□□□□□ -0.64
ATG4B-219ENST00000479941 DCLK1O15075 740 aa11.07□□□□□ -0.64
ATG4B-219ENST00000479941 RASA4O43374 803 aa11.07□□□□□ -0.64
ATG4B-219ENST00000479941 BUB1O43683 1085 aa11.07□□□□□ -0.64
ATG4B-219ENST00000479941 KDELR3O43731 214 aa11.07□□□□□ -0.64
ATG4B-219ENST00000479941 LILRB5O75023 590 aa11.07□□□□□ -0.64
ATG4B-219ENST00000479941 ZMPSTE24O75844 475 aa11.07□□□□□ -0.64
ATG4B-219ENST00000479941 C7P10643 843 aa11.07□□□□□ -0.64
ATG4B-219ENST00000479941 SRCP12931 536 aa11.07□□□□□ -0.64
ATG4B-219ENST00000479941 GABRG2P18507 467 aa11.07□□□□□ -0.64
ATG4B-219ENST00000479941 NDUFV2P19404 249 aa11.07□□□□□ -0.64
ATG4B-219ENST00000479941 IL4RP24394 825 aa11.07□□□□□ -0.64
ATG4B-219ENST00000479941 SERPINB6P35237 376 aa11.07□□□□□ -0.64
ATG4B-219ENST00000479941 ACVRL1P37023 503 aa11.07□□□□□ -0.64
ATG4B-219ENST00000479941 NBL1P41271 181 aa11.07□□□□□ -0.64
ATG4B-219ENST00000479941 NUMBP49757 651 aa11.07□□□□□ -0.64
ATG4B-219ENST00000479941 DMWDQ09019 674 aa11.07□□□□□ -0.64
ATG4B-219ENST00000479941 BYSLQ13895 437 aaKnown RBP11.07□□□□□ -0.64
ATG4B-219ENST00000479941 DPYSL3Q14195 570 aa11.07□□□□□ -0.64
ATG4B-219ENST00000479941 DLG2Q15700 870 aa11.07□□□□□ -0.64
ATG4B-219ENST00000479941 USP39Q53GS9 565 aaKnown RBP11.07□□□□□ -0.64
ATG4B-219ENST00000479941 TMCO3Q6UWJ1 677 aa11.07□□□□□ -0.64
ATG4B-219ENST00000479941 DAAM2Q86T65 1068 aa11.07□□□□□ -0.64
ATG4B-219ENST00000479941 METTL3Q86U44 580 aaKnown RBP11.07□□□□□ -0.64
ATG4B-219ENST00000479941 VSIG1Q86XK7 387 aa11.07□□□□□ -0.64
ATG4B-219ENST00000479941 ZNF354CQ86Y25 554 aa11.07□□□□□ -0.64
ATG4B-219ENST00000479941 PGBD3Q8N328 593 aa11.07□□□□□ -0.64
ATG4B-219ENST00000479941 ZNF366Q8N895 744 aa11.07□□□□□ -0.64
ATG4B-219ENST00000479941 TSC1Q92574 1164 aa11.07□□□□□ -0.64
ATG4B-219ENST00000479941 MRGPRX1Q96LB2 322 aa11.07□□□□□ -0.64
ATG4B-219ENST00000479941 CALN1Q9BXU9 219 aa11.07□□□□□ -0.64
ATG4B-219ENST00000479941 TSGA10Q9BZW7 698 aa11.07□□□□□ -0.64
ATG4B-219ENST00000479941 SEMA4AQ9H3S1 761 aa11.07□□□□□ -0.64
ATG4B-219ENST00000479941 NOL6Q9H6R4 1146 aaKnown RBP11.07□□□□□ -0.64
ATG4B-219ENST00000479941 LRRC19Q9H756 370 aa11.07□□□□□ -0.64
ATG4B-219ENST00000479941 PRSS16Q9NQE7 514 aa11.07□□□□□ -0.64
ATG4B-219ENST00000479941 DDX56Q9NY93 547 aaKnown RBP11.07□□□□□ -0.64
ATG4B-219ENST00000479941 RAPGEFL1Q9UHV5 662 aa11.07□□□□□ -0.64
ATG4B-219ENST00000479941 SALL4Q9UJQ4 1053 aa11.07□□□□□ -0.64
ATG4B-219ENST00000479941 DUSP10Q9Y6W6 482 aa11.07□□□□□ -0.64
ATG4B-219ENST00000479941 MUC22E2RYF6 1773 aaPredicted RBP11.07□□□□□ -0.64
ATG4B-219ENST00000479941 ZFHX2Q9C0A1 2572 aaPredicted RBP11.07□□□□□ -0.64
ATG4B-219ENST00000479941 ARHGAP42A6NI28 874 aa11.06□□□□□ -0.64
ATG4B-219ENST00000479941 ZNF487B1APH4 448 aa11.06□□□□□ -0.64
ATG4B-219ENST00000479941 PSTPIP1O43586 416 aa11.06□□□□□ -0.64
ATG4B-219ENST00000479941 KRT86O43790 486 aa11.06□□□□□ -0.64
ATG4B-219ENST00000479941 RNASEH1O60930 286 aaKnown RBP11.06□□□□□ -0.64
ATG4B-219ENST00000479941 SIN3BO75182 1162 aa11.06□□□□□ -0.64
ATG4B-219ENST00000479941 ZNF217O75362 1048 aa11.06□□□□□ -0.64
ATG4B-219ENST00000479941 MT-CO1P00395 513 aa11.06□□□□□ -0.64
ATG4B-219ENST00000479941 CD48P09326 243 aa11.06□□□□□ -0.64
ATG4B-219ENST00000479941 CCDC175P0C221 793 aa11.06□□□□□ -0.64
ATG4B-219ENST00000479941 AMPD1P23109 780 aa11.06□□□□□ -0.64
ATG4B-219ENST00000479941 GLDCP23378 1020 aa11.06□□□□□ -0.64
ATG4B-219ENST00000479941 KDELR1P24390 212 aa11.06□□□□□ -0.64
ATG4B-219ENST00000479941 SERPINH1P50454 418 aaKnown RBP11.06□□□□□ -0.64
ATG4B-219ENST00000479941 COPAP53621 1224 aa11.06□□□□□ -0.64
ATG4B-219ENST00000479941 ARF5P84085 180 aa11.06□□□□□ -0.64
ATG4B-219ENST00000479941 CCZ1BP86790 482 aa11.06□□□□□ -0.64
ATG4B-219ENST00000479941 CCZ1P86791 482 aaPredicted RBP11.06□□□□□ -0.64
ATG4B-219ENST00000479941 ZBTB16Q05516 673 aa11.06□□□□□ -0.64
ATG4B-219ENST00000479941 SERINC3Q13530 473 aa11.06□□□□□ -0.64
ATG4B-219ENST00000479941 ACCSLQ4AC99 568 aa11.06□□□□□ -0.64
ATG4B-219ENST00000479941 INO80DQ53TQ3 878 aaPredicted RBP11.06□□□□□ -0.64
ATG4B-219ENST00000479941 ODF2Q5BJF6 829 aa11.06□□□□□ -0.64
ATG4B-219ENST00000479941 ANKRD20A8PQ5CZ79 823 aa11.06□□□□□ -0.64
ATG4B-219ENST00000479941 C9orf64Q5T6V5 341 aa11.06□□□□□ -0.64
ATG4B-219ENST00000479941 AFMIDQ63HM1 303 aa11.06□□□□□ -0.64
ATG4B-219ENST00000479941 LINGO4Q6UY18 593 aa11.06□□□□□ -0.64
ATG4B-219ENST00000479941 C11orf74Q86VG3 221 aa11.06□□□□□ -0.64
ATG4B-219ENST00000479941 TMPRSS6Q8IU80 811 aa11.06□□□□□ -0.64
ATG4B-219ENST00000479941 RNF10Q8N5U6 811 aaKnown RBP11.06□□□□□ -0.64
ATG4B-219ENST00000479941 KIAA1524Q8TCG1 905 aa11.06□□□□□ -0.64
ATG4B-219ENST00000479941 FRS2Q8WU20 508 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms