RNA–Protein interactions for RNA: ENST00000479897.5

TRAPPC12-218, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 454 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-218ENST00000479897 RBP3P10745 1247 aa12.82□□□□□ -0.36
TRAPPC12-218ENST00000479897 CCNCP24863 283 aa12.82□□□□□ -0.36
TRAPPC12-218ENST00000479897 ACVRL1P37023 503 aa12.82□□□□□ -0.36
TRAPPC12-218ENST00000479897 GRIA2P42262 883 aa12.82□□□□□ -0.36
TRAPPC12-218ENST00000479897 SOX9P48436 509 aa12.82□□□□□ -0.36
TRAPPC12-218ENST00000479897 FNTAP49354 379 aa12.82□□□□□ -0.36
TRAPPC12-218ENST00000479897 GEMIN4P57678 1058 aaKnown RBP12.82□□□□□ -0.36
TRAPPC12-218ENST00000479897 EIF3EP60228 445 aaKnown RBP12.82□□□□□ -0.36
TRAPPC12-218ENST00000479897 PRKCQQ04759 706 aa12.82□□□□□ -0.36
TRAPPC12-218ENST00000479897 IL10RBQ08334 325 aa12.82□□□□□ -0.36
TRAPPC12-218ENST00000479897 GEN1Q17RS7 908 aa12.82□□□□□ -0.36
TRAPPC12-218ENST00000479897 SLC45A4Q5BKX6 768 aa12.82□□□□□ -0.36
TRAPPC12-218ENST00000479897 TIGD7Q6NT04 549 aaPredicted RBP12.82□□□□□ -0.36
TRAPPC12-218ENST00000479897 TXNDC11Q6PKC3 985 aa12.82□□□□□ -0.36
TRAPPC12-218ENST00000479897 ADIPOR2Q86V24 386 aa12.82□□□□□ -0.36
TRAPPC12-218ENST00000479897 GJD3Q8N144 294 aa12.82□□□□□ -0.36
TRAPPC12-218ENST00000479897 TFB1MQ8WVM0 346 aaKnown RBP12.82□□□□□ -0.36
TRAPPC12-218ENST00000479897 CASKIN2Q8WXE0 1202 aa12.82□□□□□ -0.36
TRAPPC12-218ENST00000479897 MAML1Q92585 1016 aa12.82□□□□□ -0.36
TRAPPC12-218ENST00000479897 P2RY13Q9BPV8 354 aa12.82□□□□□ -0.36
TRAPPC12-218ENST00000479897 WNT16Q9UBV4 365 aa12.82□□□□□ -0.36
TRAPPC12-218ENST00000479897 IPO11Q9UI26 975 aaKnown RBP12.82□□□□□ -0.36
TRAPPC12-218ENST00000479897 VPS51Q9UID3 782 aa12.82□□□□□ -0.36
TRAPPC12-218ENST00000479897 TRIM24O15164 1050 aa12.81□□□□□ -0.36
TRAPPC12-218ENST00000479897 MTSS1O43312 755 aa12.81□□□□□ -0.36
TRAPPC12-218ENST00000479897 TIMM44O43615 452 aa12.81□□□□□ -0.36
TRAPPC12-218ENST00000479897 KAT7O95251 611 aa12.81□□□□□ -0.36
TRAPPC12-218ENST00000479897 MAP3K6O95382 1288 aa12.81□□□□□ -0.36
TRAPPC12-218ENST00000479897 PEX11BO96011 259 aa12.81□□□□□ -0.36
TRAPPC12-218ENST00000479897 APODP05090 189 aa12.81□□□□□ -0.36
TRAPPC12-218ENST00000479897 ITGAVP06756 1048 aa12.81□□□□□ -0.36
TRAPPC12-218ENST00000479897 CHRNA3P32297 505 aa12.81□□□□□ -0.36
TRAPPC12-218ENST00000479897 SLC6A11P48066 632 aa12.81□□□□□ -0.36
TRAPPC12-218ENST00000479897 IFI35P80217 286 aaPredicted RBP12.81□□□□□ -0.36
TRAPPC12-218ENST00000479897 ARF5P84085 180 aa12.81□□□□□ -0.36
TRAPPC12-218ENST00000479897 KDSRQ06136 332 aa12.81□□□□□ -0.36
TRAPPC12-218ENST00000479897 MESP2Q0VG99 397 aa12.81□□□□□ -0.36
TRAPPC12-218ENST00000479897 BYSLQ13895 437 aaKnown RBP12.81□□□□□ -0.36
TRAPPC12-218ENST00000479897 E2F5Q15329 346 aa12.81□□□□□ -0.36
TRAPPC12-218ENST00000479897 MLF2Q15773 248 aaPredicted RBP12.81□□□□□ -0.36
TRAPPC12-218ENST00000479897 SLC44A4Q53GD3 710 aa12.81□□□□□ -0.36
TRAPPC12-218ENST00000479897 TMEM196Q5HYL7 178 aa12.81□□□□□ -0.36
TRAPPC12-218ENST00000479897 DNTTIP2Q5QJE6 756 aaKnown RBP12.81□□□□□ -0.36
TRAPPC12-218ENST00000479897 TMCO4Q5TGY1 634 aa12.81□□□□□ -0.36
TRAPPC12-218ENST00000479897 TMEM215Q68D42 235 aa12.81□□□□□ -0.36
TRAPPC12-218ENST00000479897 MBLAC2Q68D91 279 aa12.81□□□□□ -0.36
TRAPPC12-218ENST00000479897 IL31Q6EBC2 164 aa12.81□□□□□ -0.36
TRAPPC12-218ENST00000479897 RETSATQ6NUM9 610 aa12.81□□□□□ -0.36
TRAPPC12-218ENST00000479897 ARHGAP36Q6ZRI8 547 aa12.81□□□□□ -0.36
TRAPPC12-218ENST00000479897 NUDT18Q6ZVK8 323 aa12.81□□□□□ -0.36
TRAPPC12-218ENST00000479897 ADAT2Q7Z6V5 191 aaKnown RBP12.81□□□□□ -0.36
TRAPPC12-218ENST00000479897 METTL3Q86U44 580 aaKnown RBP12.81□□□□□ -0.36
TRAPPC12-218ENST00000479897 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.81□□□□□ -0.36
TRAPPC12-218ENST00000479897 CCDC13Q8IYE1 715 aa12.81□□□□□ -0.36
TRAPPC12-218ENST00000479897 APCDD1Q8J025 514 aa12.81□□□□□ -0.36
TRAPPC12-218ENST00000479897 KDM1BQ8NB78 822 aa12.81□□□□□ -0.36
TRAPPC12-218ENST00000479897 TTC8Q8TAM2 541 aa12.81□□□□□ -0.36
TRAPPC12-218ENST00000479897 ATG4AQ8WYN0 398 aa12.81□□□□□ -0.36
TRAPPC12-218ENST00000479897 SLCO2A1Q92959 643 aa12.81□□□□□ -0.36
TRAPPC12-218ENST00000479897 RTP4Q96DX8 246 aa12.81□□□□□ -0.36
TRAPPC12-218ENST00000479897 RUNDC3BQ96NL0 473 aa12.81□□□□□ -0.36
TRAPPC12-218ENST00000479897 SP110Q9HB58 689 aa12.81□□□□□ -0.36
TRAPPC12-218ENST00000479897 AMACRQ9UHK6 382 aa12.81□□□□□ -0.36
TRAPPC12-218ENST00000479897 DNPEPQ9ULA0 475 aa12.81□□□□□ -0.36
TRAPPC12-218ENST00000479897 HPCAL4Q9UM19 191 aa12.81□□□□□ -0.36
TRAPPC12-218ENST00000479897 HS3ST2Q9Y278 367 aa12.81□□□□□ -0.36
TRAPPC12-218ENST00000479897 DRG1Q9Y295 367 aaKnown RBP12.81□□□□□ -0.36
TRAPPC12-218ENST00000479897 STARD13Q9Y3M8 1113 aa12.81□□□□□ -0.36
TRAPPC12-218ENST00000479897 CKAP5Q14008 2032 aa12.81□□□□□ -0.36
TRAPPC12-218ENST00000479897 PRRT4C9JH25 899 aa12.8□□□□□ -0.36
TRAPPC12-218ENST00000479897 MAN2B1O00754 1011 aa12.8□□□□□ -0.36
TRAPPC12-218ENST00000479897 NPC1O15118 1278 aa12.8□□□□□ -0.36
TRAPPC12-218ENST00000479897 MATN3O15232 486 aa12.8□□□□□ -0.36
TRAPPC12-218ENST00000479897 SNAP91O60641 907 aa12.8□□□□□ -0.36
TRAPPC12-218ENST00000479897 CD160O95971 181 aa12.8□□□□□ -0.36
TRAPPC12-218ENST00000479897 SRPRAP08240 638 aaKnown RBP12.8□□□□□ -0.36
TRAPPC12-218ENST00000479897 CHRM1P11229 460 aaPredicted RBP12.8□□□□□ -0.36
TRAPPC12-218ENST00000479897 VAV1P15498 845 aa12.8□□□□□ -0.36
TRAPPC12-218ENST00000479897 POLR2EP19388 210 aaKnown RBP12.8□□□□□ -0.36
TRAPPC12-218ENST00000479897 DRD1P21728 446 aa12.8□□□□□ -0.36
TRAPPC12-218ENST00000479897 TNFRSF4P43489 277 aa12.8□□□□□ -0.36
TRAPPC12-218ENST00000479897 CLCN6P51797 869 aa12.8□□□□□ -0.36
TRAPPC12-218ENST00000479897 SLC20A2Q08357 652 aa12.8□□□□□ -0.36
TRAPPC12-218ENST00000479897 HNRNPDQ14103 355 aaKnown RBP12.8□□□□□ -0.36
TRAPPC12-218ENST00000479897 RFTN1Q14699 578 aaPredicted RBP12.8□□□□□ -0.36
TRAPPC12-218ENST00000479897 INO80DQ53TQ3 878 aaPredicted RBP12.8□□□□□ -0.36
TRAPPC12-218ENST00000479897 NAIF1Q69YI7 327 aaPredicted RBP12.8□□□□□ -0.36
TRAPPC12-218ENST00000479897 HEATR6Q6AI08 1181 aaKnown RBP12.8□□□□□ -0.36
TRAPPC12-218ENST00000479897 ZC3H18Q86VM9 953 aaKnown RBP12.8□□□□□ -0.36
TRAPPC12-218ENST00000479897 CEP112Q8N8E3 955 aa12.8□□□□□ -0.36
TRAPPC12-218ENST00000479897 NETO2Q8NC67 525 aa12.8□□□□□ -0.36
TRAPPC12-218ENST00000479897 MNS1Q8NEH6 495 aa12.8□□□□□ -0.36
TRAPPC12-218ENST00000479897 SPATA4Q8NEY3 305 aa12.8□□□□□ -0.36
TRAPPC12-218ENST00000479897 C1orf54Q8WWF1 131 aa12.8□□□□□ -0.36
TRAPPC12-218ENST00000479897 VAT1Q99536 393 aa12.8□□□□□ -0.36
TRAPPC12-218ENST00000479897 LGMNQ99538 433 aa12.8□□□□□ -0.36
TRAPPC12-218ENST00000479897 FERMT1Q9BQL6 677 aa12.8□□□□□ -0.36
TRAPPC12-218ENST00000479897 AP1M1Q9BXS5 423 aa12.8□□□□□ -0.36
TRAPPC12-218ENST00000479897 ARHGEF3Q9NR81 526 aa12.8□□□□□ -0.36
TRAPPC12-218ENST00000479897 ELOVL2Q9NXB9 296 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 132.6 ms