RNA–Protein interactions for RNA: ENST00000479707.1

AGRN-208, Transcript of agrin, humanhuman

TSL 3

Gene AGRN, Length 584 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGRN-208ENST00000479707 ATP13A4Q4VNC1 1196 aa19.31■□□□□ 0.68
AGRN-208ENST00000479707 C9orf64Q5T6V5 341 aa19.31■□□□□ 0.68
AGRN-208ENST00000479707 LEKR1Q6ZMV7 388 aa19.31■□□□□ 0.68
AGRN-208ENST00000479707 RFX8Q6ZV50 586 aa19.31■□□□□ 0.68
AGRN-208ENST00000479707 PSTKQ8IV42 348 aaKnown RBP19.31■□□□□ 0.68
AGRN-208ENST00000479707 SH2D3CQ8N5H7 860 aa19.31■□□□□ 0.68
AGRN-208ENST00000479707 RFFLQ8WZ73 363 aa19.31■□□□□ 0.68
AGRN-208ENST00000479707 ARHGEF2Q92974 986 aaKnown RBP19.31■□□□□ 0.68
AGRN-208ENST00000479707 EIF3CQ99613 913 aaKnown RBP19.31■□□□□ 0.68
AGRN-208ENST00000479707 RETREG1Q9H6L5 497 aa19.31■□□□□ 0.68
AGRN-208ENST00000479707 CWC15Q9P013 229 aaKnown RBP19.31■□□□□ 0.68
AGRN-208ENST00000479707 ACTL7AQ9Y615 435 aa19.31■□□□□ 0.68
AGRN-208ENST00000479707 MYO15AQ9UKN7 3530 aa19.31■□□□□ 0.68
AGRN-208ENST00000479707 USP34Q70CQ2 3546 aa19.3■□□□□ 0.68
AGRN-208ENST00000479707 THADAQ6YHU6 1953 aa19.3■□□□□ 0.68
AGRN-208ENST00000479707 CHD5Q8TDI0 1954 aa19.3■□□□□ 0.68
AGRN-208ENST00000479707 EDDM13A0A1B0GTR0 161 aa19.3■□□□□ 0.68
AGRN-208ENST00000479707 WASH4PA8MWX3 477 aa19.3■□□□□ 0.68
AGRN-208ENST00000479707 FGF10O15520 208 aaPredicted RBP19.3■□□□□ 0.68
AGRN-208ENST00000479707 SMAD6O43541 496 aaKnown RBP19.3■□□□□ 0.68
AGRN-208ENST00000479707 GFRA3O60609 400 aa19.3■□□□□ 0.68
AGRN-208ENST00000479707 ACADMP11310 421 aa19.3■□□□□ 0.68
AGRN-208ENST00000479707 SRCP12931 536 aa19.3■□□□□ 0.68
AGRN-208ENST00000479707 ERCC2P18074 760 aa19.3■□□□□ 0.68
AGRN-208ENST00000479707 TAS2R40P59535 323 aa19.3■□□□□ 0.68
AGRN-208ENST00000479707 STK40Q8N2I9 435 aa19.3■□□□□ 0.68
AGRN-208ENST00000479707 NETO2Q8NC67 525 aa19.3■□□□□ 0.68
AGRN-208ENST00000479707 FRS2Q8WU20 508 aa19.3■□□□□ 0.68
AGRN-208ENST00000479707 CELF6Q96J87 481 aaKnown RBP19.3■□□□□ 0.68
AGRN-208ENST00000479707 SPACA7Q96KW9 195 aa19.3■□□□□ 0.68
AGRN-208ENST00000479707 MAGEH1Q9H213 219 aa19.3■□□□□ 0.68
AGRN-208ENST00000479707 NOL6Q9H6R4 1146 aaKnown RBP19.3■□□□□ 0.68
AGRN-208ENST00000479707 MBD1Q9UIS9 605 aaPredicted RBP19.3■□□□□ 0.68
AGRN-208ENST00000479707 SDK1Q7Z5N4 2213 aa19.3■□□□□ 0.68
AGRN-208ENST00000479707 SPAG17Q6Q759 2223 aa19.29■□□□□ 0.68
AGRN-208ENST00000479707 TARSL2A2RTX5 802 aaKnown RBP19.29■□□□□ 0.68
AGRN-208ENST00000479707 ATP9BO43861 1147 aa19.29■□□□□ 0.68
AGRN-208ENST00000479707 ZMPSTE24O75844 475 aa19.29■□□□□ 0.68
AGRN-208ENST00000479707 AMPD1P23109 780 aa19.29■□□□□ 0.68
AGRN-208ENST00000479707 HTR7P34969 479 aa19.29■□□□□ 0.68
AGRN-208ENST00000479707 ARL4AP40617 200 aa19.29■□□□□ 0.68
AGRN-208ENST00000479707 CDH6P55285 790 aa19.29■□□□□ 0.68
AGRN-208ENST00000479707 RPS14P62263 151 aaKnown RBP19.29■□□□□ 0.68
AGRN-208ENST00000479707 ARF5P84085 180 aa19.29■□□□□ 0.68
AGRN-208ENST00000479707 BYSLQ13895 437 aaKnown RBP19.29■□□□□ 0.68
AGRN-208ENST00000479707 KRT81Q14533 505 aa19.29■□□□□ 0.68
AGRN-208ENST00000479707 DPYSL2Q16555 572 aa19.29■□□□□ 0.68
AGRN-208ENST00000479707 PLK5Q496M5 336 aa19.29■□□□□ 0.68
AGRN-208ENST00000479707 TMEM139Q8IV31 216 aa19.29■□□□□ 0.68
AGRN-208ENST00000479707 DEFB119Q8N690 84 aa19.29■□□□□ 0.68
AGRN-208ENST00000479707 ACRBPQ8NEB7 543 aa19.29■□□□□ 0.68
AGRN-208ENST00000479707 TEKT4Q8WW24 435 aa19.29■□□□□ 0.68
AGRN-208ENST00000479707 FAM129BQ96TA1 746 aa19.29■□□□□ 0.68
AGRN-208ENST00000479707 HINFPQ9BQA5 517 aa19.29■□□□□ 0.68
AGRN-208ENST00000479707 ACE2Q9BYF1 805 aaPredicted RBP19.29■□□□□ 0.68
AGRN-208ENST00000479707 DUSP15Q9H1R2 295 aaPredicted RBP19.29■□□□□ 0.68
AGRN-208ENST00000479707 PCDH18Q9HCL0 1135 aa19.29■□□□□ 0.68
AGRN-208ENST00000479707 KLHL11Q9NVR0 708 aa19.29■□□□□ 0.68
AGRN-208ENST00000479707 LCMT1Q9UIC8 334 aa19.29■□□□□ 0.68
AGRN-208ENST00000479707 HPCAL4Q9UM19 191 aa19.29■□□□□ 0.68
AGRN-208ENST00000479707 HS3ST2Q9Y278 367 aa19.29■□□□□ 0.68
AGRN-208ENST00000479707 NYNRINQ9P2P1 1898 aaKnown RBP19.28■□□□□ 0.68
AGRN-208ENST00000479707 CEP192Q8TEP8 1941 aa19.28■□□□□ 0.68
AGRN-208ENST00000479707 RASA4BC9J798 803 aa19.28■□□□□ 0.68
AGRN-208ENST00000479707 H3BRJ5 948 aa19.28■□□□□ 0.68
AGRN-208ENST00000479707 RASA4O43374 803 aa19.28■□□□□ 0.68
AGRN-208ENST00000479707 ZNF217O75362 1048 aa19.28■□□□□ 0.68
AGRN-208ENST00000479707 MTA2O94776 668 aa19.28■□□□□ 0.68
AGRN-208ENST00000479707 IPO7O95373 1038 aaKnown RBP19.28■□□□□ 0.68
AGRN-208ENST00000479707 TNNT1P13805 278 aa19.28■□□□□ 0.68
AGRN-208ENST00000479707 ETFBP38117 255 aa19.28■□□□□ 0.68
AGRN-208ENST00000479707 ARHGAP25P42331 645 aa19.28■□□□□ 0.68
AGRN-208ENST00000479707 ZFYVE27Q5T4F4 411 aa19.28■□□□□ 0.68
AGRN-208ENST00000479707 ZNF776Q68DI1 518 aaPredicted RBP19.28■□□□□ 0.68
AGRN-208ENST00000479707 RETSATQ6NUM9 610 aa19.28■□□□□ 0.68
AGRN-208ENST00000479707 Q6ZVU0 165 aa19.28■□□□□ 0.68
AGRN-208ENST00000479707 POLNQ7Z5Q5 900 aa19.28■□□□□ 0.68
AGRN-208ENST00000479707 FAM124AQ86V42 546 aa19.28■□□□□ 0.68
AGRN-208ENST00000479707 MMAAQ8IVH4 418 aaKnown RBP19.28■□□□□ 0.68
AGRN-208ENST00000479707 DCLK2Q8N568 766 aa19.28■□□□□ 0.68
AGRN-208ENST00000479707 HMCESQ96FZ2 354 aa19.28■□□□□ 0.68
AGRN-208ENST00000479707 KLC2Q9H0B6 622 aa19.28■□□□□ 0.68
AGRN-208ENST00000479707 GRPEL1Q9HAV7 217 aa19.28■□□□□ 0.68
AGRN-208ENST00000479707 LUC7LQ9NQ29 371 aaKnown RBP19.28■□□□□ 0.68
AGRN-208ENST00000479707 ITM2CQ9NQX7 267 aa19.28■□□□□ 0.68
AGRN-208ENST00000479707 NCDNQ9UBB6 729 aa19.28■□□□□ 0.68
AGRN-208ENST00000479707 FCF1Q9Y324 198 aaKnown RBP19.28■□□□□ 0.68
AGRN-208ENST00000479707 HYOU1Q9Y4L1 999 aa19.28■□□□□ 0.68
AGRN-208ENST00000479707 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa19.27■□□□□ 0.68
AGRN-208ENST00000479707 IGHV1OR15-9A0A0B4J2B8 117 aa19.27■□□□□ 0.68
AGRN-208ENST00000479707 RCCD1A6NED2 376 aa19.27■□□□□ 0.68
AGRN-208ENST00000479707 GOLGA6L3A6NEY3 463 aa19.27■□□□□ 0.68
AGRN-208ENST00000479707 KDELR3O43731 214 aa19.27■□□□□ 0.68
AGRN-208ENST00000479707 RNASEH1O60930 286 aaKnown RBP19.27■□□□□ 0.68
AGRN-208ENST00000479707 DNTTP04053 509 aa19.27■□□□□ 0.68
AGRN-208ENST00000479707 CD48P09326 243 aa19.27■□□□□ 0.68
AGRN-208ENST00000479707 MAN1A1P33908 653 aa19.27■□□□□ 0.68
AGRN-208ENST00000479707 HCAR3P49019 387 aa19.27■□□□□ 0.68
AGRN-208ENST00000479707 VASPP50552 380 aaPredicted RBP19.27■□□□□ 0.68
AGRN-208ENST00000479707 DNA2P51530 1060 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms