RNA–Protein interactions for RNA: ENST00000478582.5

CCM2-211, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 937 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-211ENST00000478582 DAPK3O43293 454 aa27.43■■□□□ 1.98
CCM2-211ENST00000478582 ERCC2P18074 760 aa27.43■■□□□ 1.98
CCM2-211ENST00000478582 IL4RP24394 825 aa27.43■■□□□ 1.98
CCM2-211ENST00000478582 IFI16Q16666 785 aaKnown RBP27.43■■□□□ 1.98
CCM2-211ENST00000478582 TMEM92Q6UXU6 159 aa27.43■■□□□ 1.98
CCM2-211ENST00000478582 RHOT1Q8IXI2 618 aa27.43■■□□□ 1.98
CCM2-211ENST00000478582 TSTD1Q8NFU3 115 aa27.43■■□□□ 1.98
CCM2-211ENST00000478582 ARHGEF2Q92974 986 aaKnown RBP27.43■■□□□ 1.98
CCM2-211ENST00000478582 CSPG4P5Q96PW8 444 aa27.43■■□□□ 1.98
CCM2-211ENST00000478582 ACE2Q9BYF1 805 aaPredicted RBP27.43■■□□□ 1.98
CCM2-211ENST00000478582 NOL6Q9H6R4 1146 aaKnown RBP27.43■■□□□ 1.98
CCM2-211ENST00000478582 CD248Q9HCU0 757 aa27.43■■□□□ 1.98
CCM2-211ENST00000478582 CFAP54Q96N23 3096 aa27.42■■□□□ 1.98
CCM2-211ENST00000478582 A0A0U1RQJ8 604 aa27.42■■□□□ 1.98
CCM2-211ENST00000478582 SPOPO43791 374 aa27.42■■□□□ 1.98
CCM2-211ENST00000478582 RAMP2O60895 175 aa27.42■■□□□ 1.98
CCM2-211ENST00000478582 HOXB2P14652 356 aa27.42■■□□□ 1.98
CCM2-211ENST00000478582 WASP42768 502 aa27.42■■□□□ 1.98
CCM2-211ENST00000478582 CTSOP43234 321 aaPredicted RBP27.42■■□□□ 1.98
CCM2-211ENST00000478582 KRT81Q14533 505 aa27.42■■□□□ 1.98
CCM2-211ENST00000478582 SERPINA13PQ6UXR4 307 aa27.42■■□□□ 1.98
CCM2-211ENST00000478582 ZNF662Q6ZS27 426 aa27.42■■□□□ 1.98
CCM2-211ENST00000478582 DAAM2Q86T65 1068 aa27.42■■□□□ 1.98
CCM2-211ENST00000478582 MAP7D3Q8IWC1 876 aa27.42■■□□□ 1.98
CCM2-211ENST00000478582 KIAA2013Q8IYS2 634 aa27.42■■□□□ 1.98
CCM2-211ENST00000478582 GPR161Q8N6U8 529 aaKnown RBP27.42■■□□□ 1.98
CCM2-211ENST00000478582 KCTD6Q8NC69 237 aa27.42■■□□□ 1.98
CCM2-211ENST00000478582 OR7D4Q8NG98 312 aa27.42■■□□□ 1.98
CCM2-211ENST00000478582 TSGA10Q9BZW7 698 aa27.42■■□□□ 1.98
CCM2-211ENST00000478582 HYOU1Q9Y4L1 999 aa27.42■■□□□ 1.98
CCM2-211ENST00000478582 MUC22E2RYF6 1773 aaPredicted RBP27.42■■□□□ 1.98
CCM2-211ENST00000478582 MYO18AQ92614 2054 aaKnown RBP27.42■■□□□ 1.98
CCM2-211ENST00000478582 A0A1W2PQF6 199 aa27.41■■□□□ 1.98
CCM2-211ENST00000478582 RPP40O75818 363 aaKnown RBP27.41■■□□□ 1.98
CCM2-211ENST00000478582 CCDC175P0C221 793 aa27.41■■□□□ 1.98
CCM2-211ENST00000478582 GJC1P36383 396 aa27.41■■□□□ 1.98
CCM2-211ENST00000478582 NDST2P52849 883 aa27.41■■□□□ 1.98
CCM2-211ENST00000478582 NAP1L1P55209 391 aaKnown RBP27.41■■□□□ 1.98
CCM2-211ENST00000478582 ST8SIA6P61647 398 aa27.41■■□□□ 1.98
CCM2-211ENST00000478582 DPYSL3Q14195 570 aa27.41■■□□□ 1.98
CCM2-211ENST00000478582 POLD3Q15054 466 aaPredicted RBP27.41■■□□□ 1.98
CCM2-211ENST00000478582 FNDC3BQ53EP0 1204 aaKnown RBP27.41■■□□□ 1.98
CCM2-211ENST00000478582 VSIG1Q86XK7 387 aa27.41■■□□□ 1.98
CCM2-211ENST00000478582 RNF10Q8N5U6 811 aaKnown RBP27.41■■□□□ 1.98
CCM2-211ENST00000478582 KLC2Q9H0B6 622 aa27.41■■□□□ 1.98
CCM2-211ENST00000478582 GOLPH3Q9H4A6 298 aa27.41■■□□□ 1.98
CCM2-211ENST00000478582 ATP13A1Q9HD20 1204 aa27.41■■□□□ 1.98
CCM2-211ENST00000478582 POLMQ9NP87 494 aaPredicted RBP27.41■■□□□ 1.98
CCM2-211ENST00000478582 DDX56Q9NY93 547 aaKnown RBP27.41■■□□□ 1.98
CCM2-211ENST00000478582 TRIM10Q9UDY6 481 aa27.41■■□□□ 1.98
CCM2-211ENST00000478582 EML5Q05BV3 1969 aa27.4■■□□□ 1.98
CCM2-211ENST00000478582 ZNF487B1APH4 448 aa27.4■■□□□ 1.98
CCM2-211ENST00000478582 DCLK1O15075 740 aa27.4■■□□□ 1.98
CCM2-211ENST00000478582 PSTPIP1O43586 416 aa27.4■■□□□ 1.98
CCM2-211ENST00000478582 ZMPSTE24O75844 475 aa27.4■■□□□ 1.98
CCM2-211ENST00000478582 RETP07949 1114 aa27.4■■□□□ 1.98
CCM2-211ENST00000478582 CD48P09326 243 aa27.4■■□□□ 1.98
CCM2-211ENST00000478582 KDELR1P24390 212 aa27.4■■□□□ 1.98
CCM2-211ENST00000478582 PRKCHP24723 683 aa27.4■■□□□ 1.98
CCM2-211ENST00000478582 PARP15Q460N3 678 aa27.4■■□□□ 1.98
CCM2-211ENST00000478582 LZTR1Q8N653 840 aa27.4■■□□□ 1.98
CCM2-211ENST00000478582 LRRC57Q8N9N7 239 aa27.4■■□□□ 1.98
CCM2-211ENST00000478582 ZNF670Q9BS34 389 aa27.4■■□□□ 1.98
CCM2-211ENST00000478582 SPON2Q9BUD6 331 aa27.4■■□□□ 1.98
CCM2-211ENST00000478582 SUN2Q9UH99 717 aa27.4■■□□□ 1.98
CCM2-211ENST00000478582 VPS51Q9UID3 782 aa27.4■■□□□ 1.98
CCM2-211ENST00000478582 SLC25A13Q9UJS0 675 aa27.4■■□□□ 1.98
CCM2-211ENST00000478582 HS3ST2Q9Y278 367 aa27.4■■□□□ 1.98
CCM2-211ENST00000478582 ZNF292O60281 2723 aa27.39■■□□□ 1.98
CCM2-211ENST00000478582 KRT86O43790 486 aa27.39■■□□□ 1.98
CCM2-211ENST00000478582 PTMAP06454 111 aaKnown RBP27.39■■□□□ 1.98
CCM2-211ENST00000478582 AMPD1P23109 780 aa27.39■■□□□ 1.98
CCM2-211ENST00000478582 ACVRL1P37023 503 aa27.39■■□□□ 1.98
CCM2-211ENST00000478582 NNMTP40261 264 aa27.39■■□□□ 1.98
CCM2-211ENST00000478582 SLC20A2Q08357 652 aa27.39■■□□□ 1.98
CCM2-211ENST00000478582 AFMIDQ63HM1 303 aa27.39■■□□□ 1.98
CCM2-211ENST00000478582 RASSF3Q86WH2 238 aa27.39■■□□□ 1.98
CCM2-211ENST00000478582 KIAA1524Q8TCG1 905 aa27.39■■□□□ 1.98
CCM2-211ENST00000478582 RAPGEF5Q92565 580 aa27.39■■□□□ 1.98
CCM2-211ENST00000478582 FAF2Q96CS3 445 aa27.39■■□□□ 1.98
CCM2-211ENST00000478582 RPL10LQ96L21 214 aaKnown RBP27.39■■□□□ 1.98
CCM2-211ENST00000478582 LRRC19Q9H756 370 aa27.39■■□□□ 1.98
CCM2-211ENST00000478582 SLCO3A1Q9UIG8 710 aa27.39■■□□□ 1.98
CCM2-211ENST00000478582 MACROD2A1Z1Q3 448 aa27.38■■□□□ 1.97
CCM2-211ENST00000478582 GRID2IPA4D2P6 1211 aa27.38■■□□□ 1.97
CCM2-211ENST00000478582 RASA4BC9J798 803 aa27.38■■□□□ 1.97
CCM2-211ENST00000478582 RASA4O43374 803 aa27.38■■□□□ 1.97
CCM2-211ENST00000478582 SNAP91O60641 907 aa27.38■■□□□ 1.97
CCM2-211ENST00000478582 EPHX1P07099 455 aa27.38■■□□□ 1.97
CCM2-211ENST00000478582 STK19P49842 368 aaPredicted RBP27.38■■□□□ 1.97
CCM2-211ENST00000478582 STARD3Q14849 445 aa27.38■■□□□ 1.97
CCM2-211ENST00000478582 IL31Q6EBC2 164 aa27.38■■□□□ 1.97
CCM2-211ENST00000478582 KIAA1211LQ6NV74 962 aa27.38■■□□□ 1.97
CCM2-211ENST00000478582 FAM160A2Q8N612 972 aaPredicted RBP27.38■■□□□ 1.97
CCM2-211ENST00000478582 CALN1Q9BXU9 219 aa27.38■■□□□ 1.97
CCM2-211ENST00000478582 RAD54BQ9Y620 910 aa27.38■■□□□ 1.97
CCM2-211ENST00000478582 CHD5Q8TDI0 1954 aa27.38■■□□□ 1.97
CCM2-211ENST00000478582 C3orf70A6NLC5 250 aaPredicted RBP27.37■■□□□ 1.97
CCM2-211ENST00000478582 KDELR3O43731 214 aa27.37■■□□□ 1.97
CCM2-211ENST00000478582 ATP9BO43861 1147 aa27.37■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms