RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 J3KRW8 73 aa4.5□□□□□ -1.69
CDC42BPA-212ENST00000478573 OAZ2O95190 189 aa4.5□□□□□ -1.69
CDC42BPA-212ENST00000478573 POLBP06746 335 aa4.5□□□□□ -1.69
CDC42BPA-212ENST00000478573 CYP3A4P08684 503 aa4.5□□□□□ -1.69
CDC42BPA-212ENST00000478573 CYP21A2P08686 494 aa4.5□□□□□ -1.69
CDC42BPA-212ENST00000478573 MATN1P21941 496 aa4.5□□□□□ -1.69
CDC42BPA-212ENST00000478573 YY1P25490 414 aa4.5□□□□□ -1.69
CDC42BPA-212ENST00000478573 CNTFP26441 200 aa4.5□□□□□ -1.69
CDC42BPA-212ENST00000478573 ME1P48163 572 aa4.5□□□□□ -1.69
CDC42BPA-212ENST00000478573 CCR5P51681 352 aa4.5□□□□□ -1.69
CDC42BPA-212ENST00000478573 YPEL5P62699 121 aa4.5□□□□□ -1.69
CDC42BPA-212ENST00000478573 RBM6P78332 1123 aaKnown RBP4.5□□□□□ -1.69
CDC42BPA-212ENST00000478573 DEUP1Q05D60 604 aa4.5□□□□□ -1.69
CDC42BPA-212ENST00000478573 CHRNDQ07001 517 aa4.5□□□□□ -1.69
CDC42BPA-212ENST00000478573 BFSP2Q13515 415 aa4.5□□□□□ -1.69
CDC42BPA-212ENST00000478573 CBFBQ13951 182 aa4.5□□□□□ -1.69
CDC42BPA-212ENST00000478573 DCTN1Q14203 1278 aa4.5□□□□□ -1.69
CDC42BPA-212ENST00000478573 MFSD13AQ14CX5 517 aa4.5□□□□□ -1.69
CDC42BPA-212ENST00000478573 ZNF569Q5MCW4 686 aa4.5□□□□□ -1.69
CDC42BPA-212ENST00000478573 ACSM6Q6P461 480 aa4.5□□□□□ -1.69
CDC42BPA-212ENST00000478573 COLCA1Q6ZS62 124 aa4.5□□□□□ -1.69
CDC42BPA-212ENST00000478573 OR52L2PQ8NGH6 319 aa4.5□□□□□ -1.69
CDC42BPA-212ENST00000478573 GLMPQ8WWB7 406 aa4.5□□□□□ -1.69
CDC42BPA-212ENST00000478573 GOLGA1Q92805 767 aa4.5□□□□□ -1.69
CDC42BPA-212ENST00000478573 REXO5Q96IC2 774 aaKnown RBP4.5□□□□□ -1.69
CDC42BPA-212ENST00000478573 MAELQ96JY0 434 aaKnown RBP4.5□□□□□ -1.69
CDC42BPA-212ENST00000478573 COG8Q96MW5 612 aa4.5□□□□□ -1.69
CDC42BPA-212ENST00000478573 CCDC134Q9H6E4 229 aa4.5□□□□□ -1.69
CDC42BPA-212ENST00000478573 PNMA2Q9UL42 364 aa4.5□□□□□ -1.69
CDC42BPA-212ENST00000478573 HS3ST3B1Q9Y662 390 aa4.5□□□□□ -1.69
CDC42BPA-212ENST00000478573 KIF1BO60333 1816 aa4.5□□□□□ -1.69
CDC42BPA-212ENST00000478573 E9PCH4 1651 aa4.5□□□□□ -1.69
CDC42BPA-212ENST00000478573 DHX29Q7Z478 1369 aaKnown RBP4.5□□□□□ -1.69
CDC42BPA-212ENST00000478573 A2ML1A8K2U0 1454 aa4.49□□□□□ -1.69
CDC42BPA-212ENST00000478573 IQSEC2Q5JU85 1478 aa4.49□□□□□ -1.69
CDC42BPA-212ENST00000478573 SAC3D1A6NKF1 404 aa4.49□□□□□ -1.69
CDC42BPA-212ENST00000478573 TLR2O60603 784 aa4.49□□□□□ -1.69
CDC42BPA-212ENST00000478573 TMIGD3P0DMS9 266 aaPredicted RBP4.49□□□□□ -1.69
CDC42BPA-212ENST00000478573 THBS4P35443 961 aa4.49□□□□□ -1.69
CDC42BPA-212ENST00000478573 FAM3BP58499 235 aaPredicted RBP4.49□□□□□ -1.69
CDC42BPA-212ENST00000478573 RPL15P61313 204 aaKnown RBP4.49□□□□□ -1.69
CDC42BPA-212ENST00000478573 RPS13P62277 151 aaKnown RBP4.49□□□□□ -1.69
CDC42BPA-212ENST00000478573 TXNL4AP83876 142 aaKnown RBP4.49□□□□□ -1.69
CDC42BPA-212ENST00000478573 CFHR1Q03591 330 aa4.49□□□□□ -1.69
CDC42BPA-212ENST00000478573 TLE3Q04726 772 aa4.49□□□□□ -1.69
CDC42BPA-212ENST00000478573 ANKRD1Q15327 319 aa4.49□□□□□ -1.69
CDC42BPA-212ENST00000478573 LEXMQ3ZCV2 418 aa4.49□□□□□ -1.69
CDC42BPA-212ENST00000478573 SLC9C1Q4G0N8 1177 aa4.49□□□□□ -1.69
CDC42BPA-212ENST00000478573 CTXN3Q4LDR2 81 aa4.49□□□□□ -1.69
CDC42BPA-212ENST00000478573 TMEM63BQ5T3F8 832 aa4.49□□□□□ -1.69
CDC42BPA-212ENST00000478573 C16orf89Q6UX73 402 aa4.49□□□□□ -1.69
CDC42BPA-212ENST00000478573 MEPCEQ7L2J0 689 aaKnown RBP4.49□□□□□ -1.69
CDC42BPA-212ENST00000478573 P3H2Q8IVL5 708 aa4.49□□□□□ -1.69
CDC42BPA-212ENST00000478573 AFAP1Q8N556 730 aa4.49□□□□□ -1.69
CDC42BPA-212ENST00000478573 ESX1Q8N693 406 aa4.49□□□□□ -1.69
CDC42BPA-212ENST00000478573 ARFGAP1Q8N6T3 406 aa4.49□□□□□ -1.69
CDC42BPA-212ENST00000478573 LINC01465Q8N7H1 131 aa4.49□□□□□ -1.69
CDC42BPA-212ENST00000478573 CEP70Q8NHQ1 597 aa4.49□□□□□ -1.69
CDC42BPA-212ENST00000478573 KTI12Q96EK9 354 aaPredicted RBP4.49□□□□□ -1.69
CDC42BPA-212ENST00000478573 EDC3Q96F86 508 aaKnown RBP4.49□□□□□ -1.69
CDC42BPA-212ENST00000478573 MARK4Q96L34 752 aa4.49□□□□□ -1.69
CDC42BPA-212ENST00000478573 NPAS1Q99742 590 aa4.49□□□□□ -1.69
CDC42BPA-212ENST00000478573 CINPQ9BW66 212 aaPredicted RBP4.49□□□□□ -1.69
CDC42BPA-212ENST00000478573 UNC45AQ9H3U1 944 aa4.49□□□□□ -1.69
CDC42BPA-212ENST00000478573 CDCP1Q9H5V8 836 aa4.49□□□□□ -1.69
CDC42BPA-212ENST00000478573 CHODLQ9H9P2 273 aa4.49□□□□□ -1.69
CDC42BPA-212ENST00000478573 SAP30LQ9HAJ7 183 aa4.49□□□□□ -1.69
CDC42BPA-212ENST00000478573 USP29Q9HBJ7 922 aa4.49□□□□□ -1.69
CDC42BPA-212ENST00000478573 NOD2Q9HC29 1040 aa4.49□□□□□ -1.69
CDC42BPA-212ENST00000478573 VPS45Q9NRW7 570 aa4.49□□□□□ -1.69
CDC42BPA-212ENST00000478573 GAR1Q9NY12 217 aaKnown RBP4.49□□□□□ -1.69
CDC42BPA-212ENST00000478573 ASAP1Q9ULH1 1129 aa4.49□□□□□ -1.69
CDC42BPA-212ENST00000478573 MAFFQ9ULX9 164 aa4.49□□□□□ -1.69
CDC42BPA-212ENST00000478573 PCDHB7Q9Y5E2 793 aa4.49□□□□□ -1.69
CDC42BPA-212ENST00000478573 NLRP1Q9C000 1473 aa4.49□□□□□ -1.69
CDC42BPA-212ENST00000478573 XIRP1Q702N8 1843 aaKnown RBP4.49□□□□□ -1.69
CDC42BPA-212ENST00000478573 PTPRKQ15262 1439 aa4.48□□□□□ -1.69
CDC42BPA-212ENST00000478573 NCOA1Q15788 1441 aa4.48□□□□□ -1.69
CDC42BPA-212ENST00000478573 CCDC196A0A1B0GTZ2 297 aa4.48□□□□□ -1.69
CDC42BPA-212ENST00000478573 M0QYT0 321 aa4.48□□□□□ -1.69
CDC42BPA-212ENST00000478573 CLIC1O00299 241 aa4.48□□□□□ -1.69
CDC42BPA-212ENST00000478573 SEPT4O43236 478 aa4.48□□□□□ -1.69
CDC42BPA-212ENST00000478573 HNRNPRO43390 633 aaKnown RBP4.48□□□□□ -1.69
CDC42BPA-212ENST00000478573 EPB41L2O43491 1005 aaKnown RBP4.48□□□□□ -1.69
CDC42BPA-212ENST00000478573 CA12O43570 354 aa4.48□□□□□ -1.69
CDC42BPA-212ENST00000478573 TSPAN3O60637 253 aa4.48□□□□□ -1.69
CDC42BPA-212ENST00000478573 KRT38O76015 456 aa4.48□□□□□ -1.69
CDC42BPA-212ENST00000478573 HEXIM1O94992 359 aaKnown RBP4.48□□□□□ -1.69
CDC42BPA-212ENST00000478573 MBPP02686 304 aaPredicted RBP4.48□□□□□ -1.69
CDC42BPA-212ENST00000478573 ALADP13716 330 aa4.48□□□□□ -1.69
CDC42BPA-212ENST00000478573 RXRAP19793 462 aa4.48□□□□□ -1.69
CDC42BPA-212ENST00000478573 DUSP1P28562 367 aa4.48□□□□□ -1.69
CDC42BPA-212ENST00000478573 IGHMBP2P38935 993 aaKnown RBP4.48□□□□□ -1.69
CDC42BPA-212ENST00000478573 CPA2P48052 419 aa4.48□□□□□ -1.69
CDC42BPA-212ENST00000478573 THBS3P49746 956 aa4.48□□□□□ -1.69
CDC42BPA-212ENST00000478573 RBM5P52756 815 aaKnown RBP eCLIP4.48□□□□□ -1.69
CDC42BPA-212ENST00000478573 FOXL2P58012 376 aa4.48□□□□□ -1.69
CDC42BPA-212ENST00000478573 KRTAP10-7P60409 375 aaPredicted RBP4.48□□□□□ -1.69
CDC42BPA-212ENST00000478573 GPC5P78333 572 aa4.48□□□□□ -1.69
CDC42BPA-212ENST00000478573 CCDC15Q0P6D6 951 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms