RNA–Protein interactions for RNA: ENST00000478531.5

BRCA1-215, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-215ENST00000478531 LEKR1Q6ZMV7 388 aa7.06□□□□□ -1.28
BRCA1-215ENST00000478531 RFX8Q6ZV50 586 aa7.06□□□□□ -1.28
BRCA1-215ENST00000478531 KIAA1328Q86T90 577 aa7.06□□□□□ -1.28
BRCA1-215ENST00000478531 RTL3Q8N8U3 475 aaKnown RBP7.06□□□□□ -1.28
BRCA1-215ENST00000478531 DCAF4L2Q8NA75 395 aa7.06□□□□□ -1.28
BRCA1-215ENST00000478531 ATP11CQ8NB49 1132 aa7.06□□□□□ -1.28
BRCA1-215ENST00000478531 NETO2Q8NC67 525 aa7.06□□□□□ -1.28
BRCA1-215ENST00000478531 ZBTB44Q8NCP5 570 aa7.06□□□□□ -1.28
BRCA1-215ENST00000478531 ALG14Q96F25 216 aa7.06□□□□□ -1.28
BRCA1-215ENST00000478531 MYO19Q96H55 970 aa7.06□□□□□ -1.28
BRCA1-215ENST00000478531 CELF6Q96J87 481 aaKnown RBP7.06□□□□□ -1.28
BRCA1-215ENST00000478531 PSMB7Q99436 277 aa7.06□□□□□ -1.28
BRCA1-215ENST00000478531 MKRN2Q9H000 416 aaKnown RBP7.06□□□□□ -1.28
BRCA1-215ENST00000478531 TMEM245Q9H330 911 aa7.06□□□□□ -1.28
BRCA1-215ENST00000478531 GOLPH3Q9H4A6 298 aa7.06□□□□□ -1.28
BRCA1-215ENST00000478531 CD93Q9NPY3 652 aa7.06□□□□□ -1.28
BRCA1-215ENST00000478531 EBF1Q9UH73 591 aa7.06□□□□□ -1.28
BRCA1-215ENST00000478531 OR51B4Q9Y5P0 310 aa7.06□□□□□ -1.28
BRCA1-215ENST00000478531 ANKRD36A6QL64 1941 aa7.06□□□□□ -1.28
BRCA1-215ENST00000478531 EDDM13A0A1B0GTR0 161 aa7.06□□□□□ -1.28
BRCA1-215ENST00000478531 RCCD1A6NED2 376 aa7.06□□□□□ -1.28
BRCA1-215ENST00000478531 H3BRJ5 948 aa7.06□□□□□ -1.28
BRCA1-215ENST00000478531 K7ERQ8 282 aa7.06□□□□□ -1.28
BRCA1-215ENST00000478531 BUB1O43683 1085 aa7.06□□□□□ -1.28
BRCA1-215ENST00000478531 SPOPO43791 374 aa7.06□□□□□ -1.28
BRCA1-215ENST00000478531 SIN3BO75182 1162 aa7.06□□□□□ -1.28
BRCA1-215ENST00000478531 MT-CO1P00395 513 aa7.06□□□□□ -1.28
BRCA1-215ENST00000478531 HOXA6P31267 233 aa7.06□□□□□ -1.28
BRCA1-215ENST00000478531 NBL1P41271 181 aa7.06□□□□□ -1.28
BRCA1-215ENST00000478531 COPAP53621 1224 aa7.06□□□□□ -1.28
BRCA1-215ENST00000478531 TAS2R40P59535 323 aa7.06□□□□□ -1.28
BRCA1-215ENST00000478531 SIM2Q14190 667 aaPredicted RBP7.06□□□□□ -1.28
BRCA1-215ENST00000478531 DPYSL2Q16555 572 aa7.06□□□□□ -1.28
BRCA1-215ENST00000478531 HNRNPA1L2Q32P51 320 aaKnown RBP7.06□□□□□ -1.28
BRCA1-215ENST00000478531 USP39Q53GS9 565 aaKnown RBP7.06□□□□□ -1.28
BRCA1-215ENST00000478531 BOLA3Q53S33 107 aa7.06□□□□□ -1.28
BRCA1-215ENST00000478531 ZNF783Q6ZMS7 281 aa7.06□□□□□ -1.28
BRCA1-215ENST00000478531 Q6ZVU0 165 aa7.06□□□□□ -1.28
BRCA1-215ENST00000478531 RASSF3Q86WH2 238 aa7.06□□□□□ -1.28
BRCA1-215ENST00000478531 TMPRSS6Q8IU80 811 aa7.06□□□□□ -1.28
BRCA1-215ENST00000478531 PSTKQ8IV42 348 aaKnown RBP7.06□□□□□ -1.28
BRCA1-215ENST00000478531 FAM160A2Q8N612 972 aaPredicted RBP7.06□□□□□ -1.28
BRCA1-215ENST00000478531 TEKT4Q8WW24 435 aa7.06□□□□□ -1.28
BRCA1-215ENST00000478531 NELL1Q92832 810 aa7.06□□□□□ -1.28
BRCA1-215ENST00000478531 FAM122AQ96E09 287 aa7.06□□□□□ -1.28
BRCA1-215ENST00000478531 HMCESQ96FZ2 354 aa7.06□□□□□ -1.28
BRCA1-215ENST00000478531 SPACA7Q96KW9 195 aa7.06□□□□□ -1.28
BRCA1-215ENST00000478531 MRGPRX1Q96LB2 322 aa7.06□□□□□ -1.28
BRCA1-215ENST00000478531 HINFPQ9BQA5 517 aa7.06□□□□□ -1.28
BRCA1-215ENST00000478531 CALN1Q9BXU9 219 aa7.06□□□□□ -1.28
BRCA1-215ENST00000478531 PRDM16Q9HAZ2 1276 aa7.06□□□□□ -1.28
BRCA1-215ENST00000478531 CD248Q9HCU0 757 aa7.06□□□□□ -1.28
BRCA1-215ENST00000478531 PRSS16Q9NQE7 514 aa7.06□□□□□ -1.28
BRCA1-215ENST00000478531 CWC15Q9P013 229 aaKnown RBP7.06□□□□□ -1.28
BRCA1-215ENST00000478531 LCMT1Q9UIC8 334 aa7.06□□□□□ -1.28
BRCA1-215ENST00000478531 HPCAL4Q9UM19 191 aa7.06□□□□□ -1.28
BRCA1-215ENST00000478531 CYP8B1Q9UNU6 501 aa7.06□□□□□ -1.28
BRCA1-215ENST00000478531 SMG5Q9UPR3 1016 aaKnown RBP7.06□□□□□ -1.28
BRCA1-215ENST00000478531 REXO2Q9Y3B8 237 aaKnown RBP7.06□□□□□ -1.28
BRCA1-215ENST00000478531 MFHAS1Q9Y4C4 1052 aa7.06□□□□□ -1.28
BRCA1-215ENST00000478531 ARIH1Q9Y4X5 557 aaPredicted RBP7.06□□□□□ -1.28
BRCA1-215ENST00000478531 ACTL7AQ9Y615 435 aa7.06□□□□□ -1.28
BRCA1-215ENST00000478531 RASA4BC9J798 803 aa7.05□□□□□ -1.28
BRCA1-215ENST00000478531 DFFAO00273 331 aa7.05□□□□□ -1.28
BRCA1-215ENST00000478531 RASA4O43374 803 aa7.05□□□□□ -1.28
BRCA1-215ENST00000478531 HRO43593 1189 aa7.05□□□□□ -1.28
BRCA1-215ENST00000478531 LILRB5O75023 590 aa7.05□□□□□ -1.28
BRCA1-215ENST00000478531 MTA2O94776 668 aa7.05□□□□□ -1.28
BRCA1-215ENST00000478531 KRT7P08729 469 aa7.05□□□□□ -1.28
BRCA1-215ENST00000478531 CD48P09326 243 aa7.05□□□□□ -1.28
BRCA1-215ENST00000478531 ACADMP11310 421 aa7.05□□□□□ -1.28
BRCA1-215ENST00000478531 SRCP12931 536 aa7.05□□□□□ -1.28
BRCA1-215ENST00000478531 ERCC2P18074 760 aa7.05□□□□□ -1.28
BRCA1-215ENST00000478531 MAN1A1P33908 653 aa7.05□□□□□ -1.28
BRCA1-215ENST00000478531 HTR7P34969 479 aa7.05□□□□□ -1.28
BRCA1-215ENST00000478531 ETFBP38117 255 aa7.05□□□□□ -1.28
BRCA1-215ENST00000478531 ARHGAP25P42331 645 aa7.05□□□□□ -1.28
BRCA1-215ENST00000478531 PI4KAP42356 2102 aa7.05□□□□□ -1.28
BRCA1-215ENST00000478531 DNA2P51530 1060 aa7.05□□□□□ -1.28
BRCA1-215ENST00000478531 MMRN1Q13201 1228 aa7.05□□□□□ -1.28
BRCA1-215ENST00000478531 CAMK2GQ13555 558 aaPredicted RBP7.05□□□□□ -1.28
BRCA1-215ENST00000478531 DPYSQ14117 519 aa7.05□□□□□ -1.28
BRCA1-215ENST00000478531 DLG2Q15700 870 aa7.05□□□□□ -1.28
BRCA1-215ENST00000478531 ATP13A4Q4VNC1 1196 aa7.05□□□□□ -1.28
BRCA1-215ENST00000478531 FAM124AQ86V42 546 aa7.05□□□□□ -1.28
BRCA1-215ENST00000478531 SH2D3CQ8N5H7 860 aa7.05□□□□□ -1.28
BRCA1-215ENST00000478531 FRMD1Q8N878 549 aa7.05□□□□□ -1.28
BRCA1-215ENST00000478531 KCTD6Q8NC69 237 aa7.05□□□□□ -1.28
BRCA1-215ENST00000478531 OR2T3Q8NH03 318 aa7.05□□□□□ -1.28
BRCA1-215ENST00000478531 GAB3Q8WWW8 586 aa7.05□□□□□ -1.28
BRCA1-215ENST00000478531 PRCCQ92733 491 aaPredicted RBP7.05□□□□□ -1.28
BRCA1-215ENST00000478531 ARHGEF2Q92974 986 aaKnown RBP7.05□□□□□ -1.28
BRCA1-215ENST00000478531 NKD2Q969F2 451 aaPredicted RBP7.05□□□□□ -1.28
BRCA1-215ENST00000478531 SIPA1Q96FS4 1042 aa7.05□□□□□ -1.28
BRCA1-215ENST00000478531 CSPG4P5Q96PW8 444 aa7.05□□□□□ -1.28
BRCA1-215ENST00000478531 MAGEH1Q9H213 219 aa7.05□□□□□ -1.28
BRCA1-215ENST00000478531 NOL6Q9H6R4 1146 aaKnown RBP7.05□□□□□ -1.28
BRCA1-215ENST00000478531 PCDH18Q9HCL0 1135 aa7.05□□□□□ -1.28
BRCA1-215ENST00000478531 SUN2Q9UH99 717 aa7.05□□□□□ -1.28
BRCA1-215ENST00000478531 RAB23Q9ULC3 237 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms