RNA–Protein interactions for RNA: ENST00000478507.1

TDP2-204, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

TSL 5

Gene TDP2, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-204ENST00000478507 SPACA3Q8IXA5 215 aa13.14□□□□□ -0.31
TDP2-204ENST00000478507 ATP6V0D2Q8N8Y2 350 aa13.14□□□□□ -0.31
TDP2-204ENST00000478507 EHBP1Q8NDI1 1231 aa13.14□□□□□ -0.31
TDP2-204ENST00000478507 OR4C6Q8NH72 309 aa13.14□□□□□ -0.31
TDP2-204ENST00000478507 DHTKD1Q96HY7 919 aaPredicted RBP13.14□□□□□ -0.31
TDP2-204ENST00000478507 HIC2Q96JB3 615 aa13.14□□□□□ -0.31
TDP2-204ENST00000478507 GTPBP4Q9BZE4 634 aaKnown RBP13.14□□□□□ -0.31
TDP2-204ENST00000478507 PREBQ9HCU5 417 aa13.14□□□□□ -0.31
TDP2-204ENST00000478507 ACP6Q9NPH0 428 aa13.14□□□□□ -0.31
TDP2-204ENST00000478507 UCKL1Q9NWZ5 548 aa13.14□□□□□ -0.31
TDP2-204ENST00000478507 HS3ST2Q9Y278 367 aa13.14□□□□□ -0.31
TDP2-204ENST00000478507 ATP6V1DQ9Y5K8 247 aa13.14□□□□□ -0.31
TDP2-204ENST00000478507 LY6G6EA0A0G2JKS1 128 aa13.13□□□□□ -0.31
TDP2-204ENST00000478507 RNF103O00237 685 aa13.13□□□□□ -0.31
TDP2-204ENST00000478507 PSMA7O14818 248 aa13.13□□□□□ -0.31
TDP2-204ENST00000478507 RNGTTO60942 597 aaKnown RBP13.13□□□□□ -0.31
TDP2-204ENST00000478507 SMC2O95347 1197 aa13.13□□□□□ -0.31
TDP2-204ENST00000478507 MT-CO3P00414 261 aa13.13□□□□□ -0.31
TDP2-204ENST00000478507 SLC2A3P11169 496 aa13.13□□□□□ -0.31
TDP2-204ENST00000478507 PLA2G2AP14555 144 aa13.13□□□□□ -0.31
TDP2-204ENST00000478507 ACTN2P35609 894 aa13.13□□□□□ -0.31
TDP2-204ENST00000478507 MARSP56192 900 aaKnown RBP13.13□□□□□ -0.31
TDP2-204ENST00000478507 E2F1Q01094 437 aa13.13□□□□□ -0.31
TDP2-204ENST00000478507 KCNMA1Q12791 1236 aa13.13□□□□□ -0.31
TDP2-204ENST00000478507 CETN1Q12798 172 aa13.13□□□□□ -0.31
TDP2-204ENST00000478507 PDCLQ13371 301 aa13.13□□□□□ -0.31
TDP2-204ENST00000478507 AUHQ13825 339 aaKnown RBP13.13□□□□□ -0.31
TDP2-204ENST00000478507 DLG2Q15700 870 aa13.13□□□□□ -0.31
TDP2-204ENST00000478507 ZNF284Q2VY69 593 aa13.13□□□□□ -0.31
TDP2-204ENST00000478507 POM121L1PQ3SYA9 428 aa13.13□□□□□ -0.31
TDP2-204ENST00000478507 RABGAP1LQ5R372 815 aa13.13□□□□□ -0.31
TDP2-204ENST00000478507 GPR155Q7Z3F1 870 aa13.13□□□□□ -0.31
TDP2-204ENST00000478507 WDTC1Q8N5D0 677 aa13.13□□□□□ -0.31
TDP2-204ENST00000478507 SH2D3CQ8N5H7 860 aa13.13□□□□□ -0.31
TDP2-204ENST00000478507 ZNF606Q8WXB4 792 aa13.13□□□□□ -0.31
TDP2-204ENST00000478507 SMARCE1Q969G3 411 aa13.13□□□□□ -0.31
TDP2-204ENST00000478507 MED15Q96RN5 788 aa13.13□□□□□ -0.31
TDP2-204ENST00000478507 CAAP1Q9H8G2 361 aa13.13□□□□□ -0.31
TDP2-204ENST00000478507 GPR27Q9NS67 375 aa13.13□□□□□ -0.31
TDP2-204ENST00000478507 KLHL11Q9NVR0 708 aa13.13□□□□□ -0.31
TDP2-204ENST00000478507 TBC1D30Q9Y2I9 924 aa13.13□□□□□ -0.31
TDP2-204ENST00000478507 PCDHB1Q9Y5F3 818 aa13.13□□□□□ -0.31
TDP2-204ENST00000478507 U3KQA8 63 aa13.13□□□□□ -0.31
TDP2-204ENST00000478507 TRPM6Q9BX84 2022 aa13.13□□□□□ -0.31
TDP2-204ENST00000478507 C1QTNF3-AMACRE9PGA6 284 aa13.12□□□□□ -0.31
TDP2-204ENST00000478507 LZTS3O60299 673 aaPredicted RBP13.12□□□□□ -0.31
TDP2-204ENST00000478507 DXOO77932 396 aaKnown RBP13.12□□□□□ -0.31
TDP2-204ENST00000478507 LETM1O95202 739 aaPredicted RBP13.12□□□□□ -0.31
TDP2-204ENST00000478507 GLI1P08151 1106 aa13.12□□□□□ -0.31
TDP2-204ENST00000478507 CKMT1AP12532 417 aa13.12□□□□□ -0.31
TDP2-204ENST00000478507 PRLRP16471 622 aa13.12□□□□□ -0.31
TDP2-204ENST00000478507 CCR1P32246 355 aa13.12□□□□□ -0.31
TDP2-204ENST00000478507 NUCB2P80303 420 aa13.12□□□□□ -0.31
TDP2-204ENST00000478507 KCNH2Q12809 1159 aa13.12□□□□□ -0.31
TDP2-204ENST00000478507 CCDC40Q4G0X9 1142 aa13.12□□□□□ -0.31
TDP2-204ENST00000478507 ARTNQ5T4W7 220 aa13.12□□□□□ -0.31
TDP2-204ENST00000478507 OTUD1Q5VV17 481 aaPredicted RBP13.12□□□□□ -0.31
TDP2-204ENST00000478507 NEK5Q6P3R8 708 aa13.12□□□□□ -0.31
TDP2-204ENST00000478507 KDM7AQ6ZMT4 941 aa13.12□□□□□ -0.31
TDP2-204ENST00000478507 SLC22A18ASQ8N1D0 253 aa13.12□□□□□ -0.31
TDP2-204ENST00000478507 OR2A12Q8NGT7 310 aa13.12□□□□□ -0.31
TDP2-204ENST00000478507 KLHDC7BQ96G42 594 aa13.12□□□□□ -0.31
TDP2-204ENST00000478507 TIGD1Q96MW7 591 aa13.12□□□□□ -0.31
TDP2-204ENST00000478507 RPRD1AQ96P16 312 aaPredicted RBP13.12□□□□□ -0.31
TDP2-204ENST00000478507 CPXM1Q96SM3 734 aa13.12□□□□□ -0.31
TDP2-204ENST00000478507 PSMB7Q99436 277 aa13.12□□□□□ -0.31
TDP2-204ENST00000478507 INTS2Q9H0H0 1204 aaKnown RBP13.12□□□□□ -0.31
TDP2-204ENST00000478507 ASNSD1Q9NWL6 643 aa13.12□□□□□ -0.31
TDP2-204ENST00000478507 DDIT4Q9NX09 232 aa13.12□□□□□ -0.31
TDP2-204ENST00000478507 SLC12A6Q9UHW9 1150 aa13.12□□□□□ -0.31
TDP2-204ENST00000478507 SLC25A13Q9UJS0 675 aa13.12□□□□□ -0.31
TDP2-204ENST00000478507 MAN1B1Q9UKM7 699 aa13.12□□□□□ -0.31
TDP2-204ENST00000478507 HS3ST4Q9Y661 456 aa13.12□□□□□ -0.31
TDP2-204ENST00000478507 DOCK4Q8N1I0 1966 aa13.11□□□□□ -0.31
TDP2-204ENST00000478507 A0A1W2PQU0 124 aa13.11□□□□□ -0.31
TDP2-204ENST00000478507 BECN2A8MW95 431 aa13.11□□□□□ -0.31
TDP2-204ENST00000478507 PPP1R3GB7ZBB8 358 aa13.11□□□□□ -0.31
TDP2-204ENST00000478507 I6L893 689 aaPredicted RBP13.11□□□□□ -0.31
TDP2-204ENST00000478507 MED7O43513 233 aa13.11□□□□□ -0.31
TDP2-204ENST00000478507 OPA1O60313 960 aa13.11□□□□□ -0.31
TDP2-204ENST00000478507 PIAS2O75928 621 aa13.11□□□□□ -0.31
TDP2-204ENST00000478507 MT-CO1P00395 513 aa13.11□□□□□ -0.31
TDP2-204ENST00000478507 THEGLP0DJG4 465 aa13.11□□□□□ -0.31
TDP2-204ENST00000478507 SRCP12931 536 aa13.11□□□□□ -0.31
TDP2-204ENST00000478507 KRT5P13647 590 aa13.11□□□□□ -0.31
TDP2-204ENST00000478507 GGCXP38435 758 aa13.11□□□□□ -0.31
TDP2-204ENST00000478507 CDK17Q00537 523 aa13.11□□□□□ -0.31
TDP2-204ENST00000478507 CCDC173Q0VFZ6 552 aa13.11□□□□□ -0.31
TDP2-204ENST00000478507 ACCSLQ4AC99 568 aa13.11□□□□□ -0.31
TDP2-204ENST00000478507 ABI3BPQ7Z7G0 1075 aa13.11□□□□□ -0.31
TDP2-204ENST00000478507 C14orf80Q86SX3 495 aa13.11□□□□□ -0.31
TDP2-204ENST00000478507 ELOA2Q8IYF1 753 aaPredicted RBP13.11□□□□□ -0.31
TDP2-204ENST00000478507 ZNF683Q8IZ20 524 aa13.11□□□□□ -0.31
TDP2-204ENST00000478507 DEFB106AQ8N104 65 aa13.11□□□□□ -0.31
TDP2-204ENST00000478507 OR13H1Q8NG92 308 aa13.11□□□□□ -0.31
TDP2-204ENST00000478507 ARRDC3Q96B67 414 aa13.11□□□□□ -0.31
TDP2-204ENST00000478507 PPP1R9BQ96SB3 815 aa13.11□□□□□ -0.31
TDP2-204ENST00000478507 FAM204AQ9H8W3 233 aa13.11□□□□□ -0.31
TDP2-204ENST00000478507 VPS28Q9UK41 221 aa13.11□□□□□ -0.31
TDP2-204ENST00000478507 VANGL2Q9ULK5 521 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms