RNA–Protein interactions for RNA: ENST00000478095.1

HDAC6-222, Transcript of histone deacetylase 6, human

TSL 4

Gene HDAC6, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDAC6-222	ENST00000478095	NBL1	P41271	181 aa		10.52	□□□□□ -0.73
HDAC6-222	ENST00000478095	NOP2	P46087	812 aa	Known RBP	10.52	□□□□□ -0.73
HDAC6-222	ENST00000478095	TAS2R40	P59535	323 aa		10.52	□□□□□ -0.73
HDAC6-222	ENST00000478095	KRT83	P78385	493 aa		10.52	□□□□□ -0.73
HDAC6-222	ENST00000478095	SULT2A1	Q06520	285 aa		10.52	□□□□□ -0.73
HDAC6-222	ENST00000478095	HADH	Q16836	314 aa	Known RBP	10.52	□□□□□ -0.73
HDAC6-222	ENST00000478095	ATP13A4	Q4VNC1	1196 aa		10.52	□□□□□ -0.73
HDAC6-222	ENST00000478095	BOLA3	Q53S33	107 aa		10.52	□□□□□ -0.73
HDAC6-222	ENST00000478095	LEKR1	Q6ZMV7	388 aa		10.52	□□□□□ -0.73
HDAC6-222	ENST00000478095	PRR23B	Q6ZRT6	265 aa		10.52	□□□□□ -0.73
HDAC6-222	ENST00000478095	RFX8	Q6ZV50	586 aa		10.52	□□□□□ -0.73
HDAC6-222	ENST00000478095	ZNF354C	Q86Y25	554 aa		10.52	□□□□□ -0.73
HDAC6-222	ENST00000478095	NETO2	Q8NC67	525 aa		10.52	□□□□□ -0.73
HDAC6-222	ENST00000478095	CELF6	Q96J87	481 aa	Known RBP	10.52	□□□□□ -0.73
HDAC6-222	ENST00000478095	PPP1R9B	Q96SB3	815 aa		10.52	□□□□□ -0.73
HDAC6-222	ENST00000478095	NCAPG	Q9BPX3	1015 aa		10.52	□□□□□ -0.73
HDAC6-222	ENST00000478095	C2orf49	Q9BVC5	232 aa	Predicted RBP	10.52	□□□□□ -0.73
HDAC6-222	ENST00000478095	MKRN2	Q9H000	416 aa	Known RBP	10.52	□□□□□ -0.73
HDAC6-222	ENST00000478095	CATSPERB	Q9H7T0	1116 aa		10.52	□□□□□ -0.73
HDAC6-222	ENST00000478095	CD93	Q9NPY3	652 aa		10.52	□□□□□ -0.73
HDAC6-222	ENST00000478095	PRSS16	Q9NQE7	514 aa		10.52	□□□□□ -0.73
HDAC6-222	ENST00000478095	CWC15	Q9P013	229 aa	Known RBP	10.52	□□□□□ -0.73
HDAC6-222	ENST00000478095	EBF1	Q9UH73	591 aa		10.52	□□□□□ -0.73
HDAC6-222	ENST00000478095	SLC25A13	Q9UJS0	675 aa		10.52	□□□□□ -0.73
HDAC6-222	ENST00000478095	HYOU1	Q9Y4L1	999 aa		10.52	□□□□□ -0.73
HDAC6-222	ENST00000478095	ACTL7A	Q9Y615	435 aa		10.52	□□□□□ -0.73
HDAC6-222	ENST00000478095	CCDC163	A0A0D9SF12	145 aa		10.51	□□□□□ -0.73
HDAC6-222	ENST00000478095	GOLGA8CP	A6NN73	597 aa		10.51	□□□□□ -0.73
HDAC6-222	ENST00000478095		K7ERQ8	282 aa		10.51	□□□□□ -0.73
HDAC6-222	ENST00000478095	FGF10	O15520	208 aa	Predicted RBP	10.51	□□□□□ -0.73
HDAC6-222	ENST00000478095	ZBTB24	O43167	697 aa	Predicted RBP	10.51	□□□□□ -0.73
HDAC6-222	ENST00000478095	BNIP3L	O60238	219 aa		10.51	□□□□□ -0.73
HDAC6-222	ENST00000478095	SIN3B	O75182	1162 aa		10.51	□□□□□ -0.73
HDAC6-222	ENST00000478095	RPP40	O75818	363 aa	Known RBP	10.51	□□□□□ -0.73
HDAC6-222	ENST00000478095	MTA2	O94776	668 aa		10.51	□□□□□ -0.73
HDAC6-222	ENST00000478095	CD48	P09326	243 aa		10.51	□□□□□ -0.73
HDAC6-222	ENST00000478095	TNNT1	P13805	278 aa		10.51	□□□□□ -0.73
HDAC6-222	ENST00000478095	ERCC2	P18074	760 aa		10.51	□□□□□ -0.73
HDAC6-222	ENST00000478095	MAN1A1	P33908	653 aa		10.51	□□□□□ -0.73
HDAC6-222	ENST00000478095	NNMT	P40261	264 aa		10.51	□□□□□ -0.73
HDAC6-222	ENST00000478095	ARL4A	P40617	200 aa		10.51	□□□□□ -0.73
HDAC6-222	ENST00000478095	COPA	P53621	1224 aa		10.51	□□□□□ -0.73
HDAC6-222	ENST00000478095	CDH6	P55285	790 aa		10.51	□□□□□ -0.73
HDAC6-222	ENST00000478095	GSDMD	P57764	484 aa		10.51	□□□□□ -0.73
HDAC6-222	ENST00000478095	CAMK2G	Q13555	558 aa	Predicted RBP	10.51	□□□□□ -0.73
HDAC6-222	ENST00000478095	KRT81	Q14533	505 aa		10.51	□□□□□ -0.73
HDAC6-222	ENST00000478095	POLD3	Q15054	466 aa	Predicted RBP	10.51	□□□□□ -0.73
HDAC6-222	ENST00000478095	E2F5	Q15329	346 aa		10.51	□□□□□ -0.73
HDAC6-222	ENST00000478095	DPYSL2	Q16555	572 aa		10.51	□□□□□ -0.73
HDAC6-222	ENST00000478095	HNRNPA1L2	Q32P51	320 aa	Known RBP	10.51	□□□□□ -0.73
HDAC6-222	ENST00000478095	ACCSL	Q4AC99	568 aa		10.51	□□□□□ -0.73
HDAC6-222	ENST00000478095	ZFYVE27	Q5T4F4	411 aa		10.51	□□□□□ -0.73
HDAC6-222	ENST00000478095	ZNF783	Q6ZMS7	281 aa		10.51	□□□□□ -0.73
HDAC6-222	ENST00000478095	CEP68	Q76N32	757 aa		10.51	□□□□□ -0.73
HDAC6-222	ENST00000478095	TMPRSS6	Q8IU80	811 aa		10.51	□□□□□ -0.73
HDAC6-222	ENST00000478095	PSTK	Q8IV42	348 aa	Known RBP	10.51	□□□□□ -0.73
HDAC6-222	ENST00000478095	FAM160A2	Q8N612	972 aa	Predicted RBP	10.51	□□□□□ -0.73
HDAC6-222	ENST00000478095	FRMD1	Q8N878	549 aa		10.51	□□□□□ -0.73
HDAC6-222	ENST00000478095	ATP11C	Q8NB49	1132 aa		10.51	□□□□□ -0.73
HDAC6-222	ENST00000478095	TEKT4	Q8WW24	435 aa		10.51	□□□□□ -0.73
HDAC6-222	ENST00000478095	ARHGEF2	Q92974	986 aa	Known RBP	10.51	□□□□□ -0.73
HDAC6-222	ENST00000478095	HMCES	Q96FZ2	354 aa		10.51	□□□□□ -0.73
HDAC6-222	ENST00000478095	MRGPRX1	Q96LB2	322 aa		10.51	□□□□□ -0.73
HDAC6-222	ENST00000478095	GOLPH3	Q9H4A6	298 aa		10.51	□□□□□ -0.73
HDAC6-222	ENST00000478095	NOL6	Q9H6R4	1146 aa	Known RBP	10.51	□□□□□ -0.73
HDAC6-222	ENST00000478095	PRDM16	Q9HAZ2	1276 aa		10.51	□□□□□ -0.73
HDAC6-222	ENST00000478095	PCDH18	Q9HCL0	1135 aa		10.51	□□□□□ -0.73
HDAC6-222	ENST00000478095	LUC7L	Q9NQ29	371 aa	Known RBP	10.51	□□□□□ -0.73
HDAC6-222	ENST00000478095	SALL4	Q9UJQ4	1053 aa		10.51	□□□□□ -0.73
HDAC6-222	ENST00000478095	MFHAS1	Q9Y4C4	1052 aa		10.51	□□□□□ -0.73
HDAC6-222	ENST00000478095	CACNA1H	O95180	2353 aa		10.51	□□□□□ -0.73
HDAC6-222	ENST00000478095	CACNA1I	Q9P0X4	2223 aa		10.5	□□□□□ -0.73
HDAC6-222	ENST00000478095		A0A0U1RQJ8	604 aa		10.5	□□□□□ -0.73
HDAC6-222	ENST00000478095	EDDM13	A0A1B0GTR0	161 aa		10.5	□□□□□ -0.73
HDAC6-222	ENST00000478095	WASH4P	A8MWX3	477 aa		10.5	□□□□□ -0.73
HDAC6-222	ENST00000478095	RASA4B	C9J798	803 aa		10.5	□□□□□ -0.73
HDAC6-222	ENST00000478095		H3BRJ5	948 aa		10.5	□□□□□ -0.73
HDAC6-222	ENST00000478095	RASA4	O43374	803 aa		10.5	□□□□□ -0.73
HDAC6-222	ENST00000478095	SMAD6	O43541	496 aa	Known RBP	10.5	□□□□□ -0.73
HDAC6-222	ENST00000478095	BUB1	O43683	1085 aa		10.5	□□□□□ -0.73
HDAC6-222	ENST00000478095	BUB1B	O60566	1050 aa	Predicted RBP	10.5	□□□□□ -0.73
HDAC6-222	ENST00000478095	ZMPSTE24	O75844	475 aa		10.5	□□□□□ -0.73
HDAC6-222	ENST00000478095	SRC	P12931	536 aa		10.5	□□□□□ -0.73
HDAC6-222	ENST00000478095	BCKDHB	P21953	392 aa		10.5	□□□□□ -0.73
HDAC6-222	ENST00000478095	COMT	P21964	271 aa		10.5	□□□□□ -0.73
HDAC6-222	ENST00000478095	AMPD1	P23109	780 aa		10.5	□□□□□ -0.73
HDAC6-222	ENST00000478095	HTR7	P34969	479 aa		10.5	□□□□□ -0.73
HDAC6-222	ENST00000478095	ETFB	P38117	255 aa		10.5	□□□□□ -0.73
HDAC6-222	ENST00000478095	ARHGAP25	P42331	645 aa		10.5	□□□□□ -0.73
HDAC6-222	ENST00000478095	ARF5	P84085	180 aa		10.5	□□□□□ -0.73
HDAC6-222	ENST00000478095	DPYS	Q14117	519 aa		10.5	□□□□□ -0.73
HDAC6-222	ENST00000478095	SIM2	Q14190	667 aa	Predicted RBP	10.5	□□□□□ -0.73
HDAC6-222	ENST00000478095	DLG2	Q15700	870 aa		10.5	□□□□□ -0.73
HDAC6-222	ENST00000478095	USP39	Q53GS9	565 aa	Known RBP	10.5	□□□□□ -0.73
HDAC6-222	ENST00000478095	C9orf64	Q5T6V5	341 aa		10.5	□□□□□ -0.73
HDAC6-222	ENST00000478095		Q6ZVU0	165 aa		10.5	□□□□□ -0.73
HDAC6-222	ENST00000478095	POLN	Q7Z5Q5	900 aa		10.5	□□□□□ -0.73
HDAC6-222	ENST00000478095	KIAA1328	Q86T90	577 aa		10.5	□□□□□ -0.73
HDAC6-222	ENST00000478095	STK40	Q8N2I9	435 aa		10.5	□□□□□ -0.73
HDAC6-222	ENST00000478095	SH2D3C	Q8N5H7	860 aa		10.5	□□□□□ -0.73

Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms