RNA–Protein interactions for RNA: ENST00000477757.5

PDLIM1-202, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 850 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-202ENST00000477757 CBWD3Q5JTY5 395 aa20.83■□□□□ 0.93
PDLIM1-202ENST00000477757 CBWD5Q5RIA9 395 aa20.83■□□□□ 0.93
PDLIM1-202ENST00000477757 PIP5KL1Q5T9C9 394 aa20.83■□□□□ 0.93
PDLIM1-202ENST00000477757 NEK5Q6P3R8 708 aa20.83■□□□□ 0.93
PDLIM1-202ENST00000477757 ABI3BPQ7Z7G0 1075 aa20.83■□□□□ 0.93
PDLIM1-202ENST00000477757 CLEC14AQ86T13 490 aa20.83■□□□□ 0.93
PDLIM1-202ENST00000477757 SLC22A18ASQ8N1D0 253 aa20.83■□□□□ 0.93
PDLIM1-202ENST00000477757 ERCC4Q92889 916 aaPredicted RBP20.83■□□□□ 0.93
PDLIM1-202ENST00000477757 TRIM4Q9C037 500 aa20.83■□□□□ 0.93
PDLIM1-202ENST00000477757 FZD3Q9NPG1 666 aa20.83■□□□□ 0.93
PDLIM1-202ENST00000477757 MAPK8IP1Q9UQF2 711 aa20.83■□□□□ 0.93
PDLIM1-202ENST00000477757 COQ4Q9Y3A0 265 aa20.83■□□□□ 0.93
PDLIM1-202ENST00000477757 ENTPD2Q9Y5L3 495 aa20.83■□□□□ 0.93
PDLIM1-202ENST00000477757 M0QYV0 167 aa20.82■□□□□ 0.92
PDLIM1-202ENST00000477757 TERTO14746 1132 aaKnown RBP20.82■□□□□ 0.92
PDLIM1-202ENST00000477757 MCF2LO15068 1137 aa20.82■□□□□ 0.92
PDLIM1-202ENST00000477757 PAEPP09466 180 aa20.82■□□□□ 0.92
PDLIM1-202ENST00000477757 HNRNPA2B1P22626 353 aaKnown RBP20.82■□□□□ 0.92
PDLIM1-202ENST00000477757 EDRF1Q3B7T1 1238 aa20.82■□□□□ 0.92
PDLIM1-202ENST00000477757 TTC39BQ5VTQ0 682 aaPredicted RBP20.82■□□□□ 0.92
PDLIM1-202ENST00000477757 CXorf57Q6NSI4 855 aaKnown RBP20.82■□□□□ 0.92
PDLIM1-202ENST00000477757 ZCCHC8Q6NZY4 707 aaKnown RBP20.82■□□□□ 0.92
PDLIM1-202ENST00000477757 GCNT7Q6ZNI0 430 aa20.82■□□□□ 0.92
PDLIM1-202ENST00000477757 Q6ZVU0 165 aa20.82■□□□□ 0.92
PDLIM1-202ENST00000477757 HORMAD1Q86X24 394 aa20.82■□□□□ 0.92
PDLIM1-202ENST00000477757 LURAP1LQ8IV03 231 aa20.82■□□□□ 0.92
PDLIM1-202ENST00000477757 CCAR2Q8N163 923 aaKnown RBP20.82■□□□□ 0.92
PDLIM1-202ENST00000477757 KLK6Q92876 244 aa20.82■□□□□ 0.92
PDLIM1-202ENST00000477757 BTN2A3PQ96KV6 586 aa20.82■□□□□ 0.92
PDLIM1-202ENST00000477757 HSFY1Q96LI6 401 aa20.82■□□□□ 0.92
PDLIM1-202ENST00000477757 NOX5Q96PH1 765 aa20.82■□□□□ 0.92
PDLIM1-202ENST00000477757 FAM117AQ9C073 453 aa20.82■□□□□ 0.92
PDLIM1-202ENST00000477757 NCKIPSDQ9NZQ3 722 aa20.82■□□□□ 0.92
PDLIM1-202ENST00000477757 USP25Q9UHP3 1055 aa20.82■□□□□ 0.92
PDLIM1-202ENST00000477757 NAALADL1Q9UQQ1 740 aa20.82■□□□□ 0.92
PDLIM1-202ENST00000477757 TCAF2A6NFQ2 919 aa20.81■□□□□ 0.92
PDLIM1-202ENST00000477757 F5H5T6 163 aa20.81■□□□□ 0.92
PDLIM1-202ENST00000477757 RIOK3O14730 519 aaKnown RBP20.81■□□□□ 0.92
PDLIM1-202ENST00000477757 NEBLO76041 1014 aa20.81■□□□□ 0.92
PDLIM1-202ENST00000477757 OXCT1P55809 520 aa20.81■□□□□ 0.92
PDLIM1-202ENST00000477757 HNRNPKP61978 463 aaKnown RBP eCLIP20.81■□□□□ 0.92
PDLIM1-202ENST00000477757 ARL13BQ3SXY8 428 aa20.81■□□□□ 0.92
PDLIM1-202ENST00000477757 RBM44Q6ZP01 1051 aaKnown RBP20.81■□□□□ 0.92
PDLIM1-202ENST00000477757 CIR1Q86X95 450 aaPredicted RBP20.81■□□□□ 0.92
PDLIM1-202ENST00000477757 EXD3Q8N9H8 876 aa20.81■□□□□ 0.92
PDLIM1-202ENST00000477757 ZNF548Q8NEK5 533 aaPredicted RBP20.81■□□□□ 0.92
PDLIM1-202ENST00000477757 CCDC47Q96A33 483 aaKnown RBP20.81■□□□□ 0.92
PDLIM1-202ENST00000477757 ZSWIM1Q9BR11 485 aa20.81■□□□□ 0.92
PDLIM1-202ENST00000477757 MIS12Q9H081 205 aa20.81■□□□□ 0.92
PDLIM1-202ENST00000477757 GPR27Q9NS67 375 aa20.81■□□□□ 0.92
PDLIM1-202ENST00000477757 DNAJC28Q9NX36 388 aa20.81■□□□□ 0.92
PDLIM1-202ENST00000477757 SLC25A13Q9UJS0 675 aa20.81■□□□□ 0.92
PDLIM1-202ENST00000477757 BSNQ9UPA5 3926 aa20.81■□□□□ 0.92
PDLIM1-202ENST00000477757 TDRD6O60522 2096 aaKnown RBP20.81■□□□□ 0.92
PDLIM1-202ENST00000477757 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP20.8■□□□□ 0.92
PDLIM1-202ENST00000477757 PMS2P1A4D2B8 440 aa20.8■□□□□ 0.92
PDLIM1-202ENST00000477757 A6NNZ2 444 aa20.8■□□□□ 0.92
PDLIM1-202ENST00000477757 SART1O43290 800 aaKnown RBP20.8■□□□□ 0.92
PDLIM1-202ENST00000477757 TCEA3O75764 348 aa20.8■□□□□ 0.92
PDLIM1-202ENST00000477757 EPB41P11171 864 aaKnown RBP20.8■□□□□ 0.92
PDLIM1-202ENST00000477757 PFKFB1P16118 471 aa20.8■□□□□ 0.92
PDLIM1-202ENST00000477757 TBXAS1P24557 533 aaPredicted RBP20.8■□□□□ 0.92
PDLIM1-202ENST00000477757 CLDN2P57739 230 aa20.8■□□□□ 0.92
PDLIM1-202ENST00000477757 NUCB2P80303 420 aa20.8■□□□□ 0.92
PDLIM1-202ENST00000477757 ZNF177Q13360 481 aaPredicted RBP20.8■□□□□ 0.92
PDLIM1-202ENST00000477757 DLG2Q15700 870 aa20.8■□□□□ 0.92
PDLIM1-202ENST00000477757 CNGA2Q16280 664 aa20.8■□□□□ 0.92
PDLIM1-202ENST00000477757 CDKN3Q16667 212 aa20.8■□□□□ 0.92
PDLIM1-202ENST00000477757 FOXD4L6Q3SYB3 417 aaPredicted RBP20.8■□□□□ 0.92
PDLIM1-202ENST00000477757 ACCSLQ4AC99 568 aa20.8■□□□□ 0.92
PDLIM1-202ENST00000477757 ZC3H12AQ5D1E8 599 aaKnown RBP20.8■□□□□ 0.92
PDLIM1-202ENST00000477757 ZNF542PQ5EBM4 170 aa20.8■□□□□ 0.92
PDLIM1-202ENST00000477757 GUSBP11Q6P575 273 aa20.8■□□□□ 0.92
PDLIM1-202ENST00000477757 FOXD4L3Q6VB84 417 aaPredicted RBP20.8■□□□□ 0.92
PDLIM1-202ENST00000477757 BEND5Q7L4P6 421 aa20.8■□□□□ 0.92
PDLIM1-202ENST00000477757 ARL14Q8N4G2 192 aa20.8■□□□□ 0.92
PDLIM1-202ENST00000477757 FAM174AQ8TBP5 190 aa20.8■□□□□ 0.92
PDLIM1-202ENST00000477757 FAM149B1Q96BN6 582 aa20.8■□□□□ 0.92
PDLIM1-202ENST00000477757 ALG14Q96F25 216 aa20.8■□□□□ 0.92
PDLIM1-202ENST00000477757 PRMT1Q99873 361 aaKnown RBP20.8■□□□□ 0.92
PDLIM1-202ENST00000477757 ATXN7L1Q9ULK2 861 aaPredicted RBP20.8■□□□□ 0.92
PDLIM1-202ENST00000477757 ZNF18P17022 549 aa20.79■□□□□ 0.92
PDLIM1-202ENST00000477757 STILQ15468 1287 aa20.79■□□□□ 0.92
PDLIM1-202ENST00000477757 ZSCAN23Q3MJ62 389 aa20.79■□□□□ 0.92
PDLIM1-202ENST00000477757 DCAF17Q5H9S7 520 aaPredicted RBP20.79■□□□□ 0.92
PDLIM1-202ENST00000477757 FOXD4L5Q5VV16 416 aaPredicted RBP20.79■□□□□ 0.92
PDLIM1-202ENST00000477757 TMEM270Q6UE05 265 aa20.79■□□□□ 0.92
PDLIM1-202ENST00000477757 EFL1Q7Z2Z2 1120 aaKnown RBP20.79■□□□□ 0.92
PDLIM1-202ENST00000477757 PTAR1Q7Z6K3 402 aaPredicted RBP20.79■□□□□ 0.92
PDLIM1-202ENST00000477757 DCP2Q8IU60 420 aaKnown RBP20.79■□□□□ 0.92
PDLIM1-202ENST00000477757 TPCN2Q8NHX9 752 aa20.79■□□□□ 0.92
PDLIM1-202ENST00000477757 FOXD4L4Q8WXT5 416 aaPredicted RBP20.79■□□□□ 0.92
PDLIM1-202ENST00000477757 CCNL2Q96S94 520 aaPredicted RBP20.79■□□□□ 0.92
PDLIM1-202ENST00000477757 TRIM62Q9BVG3 475 aa20.79■□□□□ 0.92
PDLIM1-202ENST00000477757 CSNK1G3Q9Y6M4 447 aa20.79■□□□□ 0.92
PDLIM1-202ENST00000477757 TEX15Q9BXT5 2789 aa20.79■□□□□ 0.92
PDLIM1-202ENST00000477757 IGLV3-25P01717 112 aa20.78■□□□□ 0.92
PDLIM1-202ENST00000477757 CTSLP07711 333 aa20.78■□□□□ 0.92
PDLIM1-202ENST00000477757 PRR29P0C7W0 189 aa20.78■□□□□ 0.92
PDLIM1-202ENST00000477757 NME1P15531 152 aaKnown RBP20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms