RNA–Protein interactions for RNA: ENST00000477739.1

CMC1-209, Transcript of C-X9-C motif containing 1, humanhuman

TSL 1 (best)

Gene CMC1, Length 3,749 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-209ENST00000477739 ZNF786Q8N393 782 aa9.95□□□□□ -0.82
CMC1-209ENST00000477739 PDZD8Q8NEN9 1154 aa9.95□□□□□ -0.82
CMC1-209ENST00000477739 FNIP1Q8TF40 1166 aa9.95□□□□□ -0.82
CMC1-209ENST00000477739 RNF139Q8WU17 664 aa9.95□□□□□ -0.82
CMC1-209ENST00000477739 ATP6V1E2Q96A05 226 aa9.95□□□□□ -0.82
CMC1-209ENST00000477739 ZMAT2Q96NC0 199 aaKnown RBP9.95□□□□□ -0.82
CMC1-209ENST00000477739 CCT7Q99832 543 aa9.95□□□□□ -0.82
CMC1-209ENST00000477739 S100A14Q9HCY8 104 aa9.95□□□□□ -0.82
CMC1-209ENST00000477739 VCX3AQ9NNX9 186 aa9.95□□□□□ -0.82
CMC1-209ENST00000477739 ITGA11Q9UKX5 1188 aa9.95□□□□□ -0.82
CMC1-209ENST00000477739 KCNU1A8MYU2 1149 aa9.95□□□□□ -0.82
CMC1-209ENST00000477739 SOCS7O14512 581 aa9.95□□□□□ -0.82
CMC1-209ENST00000477739 ABLIM1O14639 778 aa9.95□□□□□ -0.82
CMC1-209ENST00000477739 MSI1O43347 362 aaKnown RBP9.95□□□□□ -0.82
CMC1-209ENST00000477739 PLIN3O60664 434 aa9.95□□□□□ -0.82
CMC1-209ENST00000477739 GLRA3O75311 464 aa9.95□□□□□ -0.82
CMC1-209ENST00000477739 CNMDO75829 334 aa9.95□□□□□ -0.82
CMC1-209ENST00000477739 BEST1O76090 585 aa9.95□□□□□ -0.82
CMC1-209ENST00000477739 CDH5P33151 784 aaPredicted RBP9.95□□□□□ -0.82
CMC1-209ENST00000477739 TEDDM1Q5T9Z0 273 aa9.95□□□□□ -0.82
CMC1-209ENST00000477739 C9orf131Q5VYM1 1079 aa9.95□□□□□ -0.82
CMC1-209ENST00000477739 FSTL4Q6MZW2 842 aa9.95□□□□□ -0.82
CMC1-209ENST00000477739 ACAD11Q709F0 780 aa9.95□□□□□ -0.82
CMC1-209ENST00000477739 KCNMB4Q86W47 210 aa9.95□□□□□ -0.82
CMC1-209ENST00000477739 NT5DC4Q86YG4 428 aa9.95□□□□□ -0.82
CMC1-209ENST00000477739 TDRPQ86YL5 185 aa9.95□□□□□ -0.82
CMC1-209ENST00000477739 CMASQ8NFW8 434 aaPredicted RBP9.95□□□□□ -0.82
CMC1-209ENST00000477739 PHIPQ8WWQ0 1821 aa9.95□□□□□ -0.82
CMC1-209ENST00000477739 EVPLQ92817 2033 aa9.95□□□□□ -0.82
CMC1-209ENST00000477739 CERS2Q96G23 380 aa9.95□□□□□ -0.82
CMC1-209ENST00000477739 MRPL46Q9H2W6 279 aaKnown RBP9.95□□□□□ -0.82
CMC1-209ENST00000477739 SOX17Q9H6I2 414 aaPredicted RBP9.95□□□□□ -0.82
CMC1-209ENST00000477739 TMEM165Q9HC07 324 aa9.95□□□□□ -0.82
CMC1-209ENST00000477739 XPR1Q9UBH6 696 aa9.95□□□□□ -0.82
CMC1-209ENST00000477739 ZNF212Q9UDV6 495 aa9.95□□□□□ -0.82
CMC1-209ENST00000477739 DOLKQ9UPQ8 538 aa9.95□□□□□ -0.82
CMC1-209ENST00000477739 ZNF839A8K0R7 811 aa9.95□□□□□ -0.82
CMC1-209ENST00000477739 MAGEB3O15480 346 aa9.95□□□□□ -0.82
CMC1-209ENST00000477739 ERCC2P18074 760 aa9.95□□□□□ -0.82
CMC1-209ENST00000477739 NMBRP28336 390 aa9.95□□□□□ -0.82
CMC1-209ENST00000477739 GRIK3Q13003 919 aa9.95□□□□□ -0.82
CMC1-209ENST00000477739 PPIL2Q13356 520 aa9.95□□□□□ -0.82
CMC1-209ENST00000477739 HSF5Q4G112 596 aaPredicted RBP9.95□□□□□ -0.82
CMC1-209ENST00000477739 CWF19L1Q69YN2 538 aaKnown RBP9.95□□□□□ -0.82
CMC1-209ENST00000477739 MTHFD1LQ6UB35 978 aa9.95□□□□□ -0.82
CMC1-209ENST00000477739 TMC7Q7Z402 723 aa9.95□□□□□ -0.82
CMC1-209ENST00000477739 ZNF567Q8N184 647 aa9.95□□□□□ -0.82
CMC1-209ENST00000477739 APPL2Q8NEU8 664 aa9.95□□□□□ -0.82
CMC1-209ENST00000477739 GATA5Q9BWX5 397 aaPredicted RBP9.95□□□□□ -0.82
CMC1-209ENST00000477739 BCO2Q9BYV7 579 aa9.95□□□□□ -0.82
CMC1-209ENST00000477739 ULBP1Q9BZM6 244 aa9.95□□□□□ -0.82
CMC1-209ENST00000477739 DNAI2Q9GZS0 605 aa9.95□□□□□ -0.82
CMC1-209ENST00000477739 NMRAL1Q9HBL8 299 aa9.95□□□□□ -0.82
CMC1-209ENST00000477739 CCL15-CCL14A0A0B4J2E2 113 aa9.94□□□□□ -0.82
CMC1-209ENST00000477739 MEIS3P2A8K0S8 358 aa9.94□□□□□ -0.82
CMC1-209ENST00000477739 CHADO15335 359 aa9.94□□□□□ -0.82
CMC1-209ENST00000477739 PRKCGP05129 697 aa9.94□□□□□ -0.82
CMC1-209ENST00000477739 PROZP22891 400 aa9.94□□□□□ -0.82
CMC1-209ENST00000477739 ARHGAP1Q07960 439 aa9.94□□□□□ -0.82
CMC1-209ENST00000477739 CAPRIN1Q14444 709 aaKnown RBP9.94□□□□□ -0.82
CMC1-209ENST00000477739 GRM3Q14832 879 aa9.94□□□□□ -0.82
CMC1-209ENST00000477739 CCL15Q16663 113 aa9.94□□□□□ -0.82
CMC1-209ENST00000477739 OTUD3Q5T2D3 398 aaPredicted RBP9.94□□□□□ -0.82
CMC1-209ENST00000477739 SEL1L3Q68CR1 1132 aa9.94□□□□□ -0.82
CMC1-209ENST00000477739 ZNF470Q6ECI4 717 aa9.94□□□□□ -0.82
CMC1-209ENST00000477739 SIGLEC10Q96LC7 697 aa9.94□□□□□ -0.82
CMC1-209ENST00000477739 FCRL3Q96P31 734 aaPredicted RBP9.94□□□□□ -0.82
CMC1-209ENST00000477739 SEPHS2Q99611 448 aa9.94□□□□□ -0.82
CMC1-209ENST00000477739 ILKAPQ9H0C8 392 aaPredicted RBP9.94□□□□□ -0.82
CMC1-209ENST00000477739 PLEKHA5Q9HAU0 1116 aa9.94□□□□□ -0.82
CMC1-209ENST00000477739 MPP6Q9NZW5 540 aa9.94□□□□□ -0.82
CMC1-209ENST00000477739 COPG2Q9UBF2 871 aa9.94□□□□□ -0.82
CMC1-209ENST00000477739 PTGDR2Q9Y5Y4 395 aa9.94□□□□□ -0.82
CMC1-209ENST00000477739 TCRBV5S1A1TA0A578 114 aa9.94□□□□□ -0.82
CMC1-209ENST00000477739 ERI2A8K979 691 aaKnown RBP9.94□□□□□ -0.82
CMC1-209ENST00000477739 PDHXO00330 501 aa9.94□□□□□ -0.82
CMC1-209ENST00000477739 MYL3P08590 195 aa9.94□□□□□ -0.82
CMC1-209ENST00000477739 ARRB2P32121 409 aa9.94□□□□□ -0.82
CMC1-209ENST00000477739 ACTR3P61158 418 aa9.94□□□□□ -0.82
CMC1-209ENST00000477739 USP46P62068 366 aa9.94□□□□□ -0.82
CMC1-209ENST00000477739 KLF10Q13118 480 aa9.94□□□□□ -0.82
CMC1-209ENST00000477739 PTK2BQ14289 1009 aa9.94□□□□□ -0.82
CMC1-209ENST00000477739 PTPRCAPQ14761 206 aa9.94□□□□□ -0.82
CMC1-209ENST00000477739 LIN52Q52LA3 116 aa9.94□□□□□ -0.82
CMC1-209ENST00000477739 DNAJC14Q6Y2X3 702 aaPredicted RBP9.94□□□□□ -0.82
CMC1-209ENST00000477739 MIB1Q86YT6 1006 aa9.94□□□□□ -0.82
CMC1-209ENST00000477739 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.94□□□□□ -0.82
CMC1-209ENST00000477739 GRIN3AQ8TCU5 1115 aa9.94□□□□□ -0.82
CMC1-209ENST00000477739 HAUS8Q9BT25 410 aa9.94□□□□□ -0.82
CMC1-209ENST00000477739 FICDQ9BVA6 458 aa9.94□□□□□ -0.82
CMC1-209ENST00000477739 SLC4A5Q9BY07 1137 aa9.94□□□□□ -0.82
CMC1-209ENST00000477739 FRMD8P1Q9BZ68 369 aaPredicted RBP9.94□□□□□ -0.82
CMC1-209ENST00000477739 RBBP6Q7Z6E9 1792 aaKnown RBP9.94□□□□□ -0.82
CMC1-209ENST00000477739 A0A088AWK7 358 aa9.94□□□□□ -0.82
CMC1-209ENST00000477739 HMX2A2RU54 273 aa9.94□□□□□ -0.82
CMC1-209ENST00000477739 OR51F1A6NGY5 319 aa9.94□□□□□ -0.82
CMC1-209ENST00000477739 A6NHS1 94 aa9.94□□□□□ -0.82
CMC1-209ENST00000477739 TSPAN1O60635 241 aa9.94□□□□□ -0.82
CMC1-209ENST00000477739 TIPRLO75663 272 aa9.94□□□□□ -0.82
CMC1-209ENST00000477739 KLHL2O95198 593 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms