RNA–Protein interactions for RNA: ENST00000477485.1

RTFDC1-206, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-206ENST00000477485 ZSCAN23Q3MJ62 389 aa6.87□□□□□ -1.31
RTFDC1-206ENST00000477485 CCDC40Q4G0X9 1142 aa6.87□□□□□ -1.31
RTFDC1-206ENST00000477485 PKDCCQ504Y2 493 aa6.87□□□□□ -1.31
RTFDC1-206ENST00000477485 ZCWPW2Q504Y3 356 aa6.87□□□□□ -1.31
RTFDC1-206ENST00000477485 AGBL4Q5VU57 503 aa6.87□□□□□ -1.31
RTFDC1-206ENST00000477485 SYPL2Q5VXT5 272 aa6.87□□□□□ -1.31
RTFDC1-206ENST00000477485 KIAA1614Q5VZ46 1190 aa6.87□□□□□ -1.31
RTFDC1-206ENST00000477485 OR6B2Q6IFH4 312 aa6.87□□□□□ -1.31
RTFDC1-206ENST00000477485 PCSK4Q6UW60 755 aa6.87□□□□□ -1.31
RTFDC1-206ENST00000477485 KRBA2Q6ZNG9 492 aa6.87□□□□□ -1.31
RTFDC1-206ENST00000477485 RRAGAQ7L523 313 aa6.87□□□□□ -1.31
RTFDC1-206ENST00000477485 KANSL1Q7Z3B3 1105 aa6.87□□□□□ -1.31
RTFDC1-206ENST00000477485 TRIM69Q86WT6 500 aa6.87□□□□□ -1.31
RTFDC1-206ENST00000477485 SCML4Q8N228 414 aa6.87□□□□□ -1.31
RTFDC1-206ENST00000477485 SLC25A45Q8N413 288 aa6.87□□□□□ -1.31
RTFDC1-206ENST00000477485 OR13H1Q8NG92 308 aa6.87□□□□□ -1.31
RTFDC1-206ENST00000477485 IFI44Q8TCB0 444 aa6.87□□□□□ -1.31
RTFDC1-206ENST00000477485 GRIN3AQ8TCU5 1115 aa6.87□□□□□ -1.31
RTFDC1-206ENST00000477485 SLC35F5Q8WV83 523 aa6.87□□□□□ -1.31
RTFDC1-206ENST00000477485 RFFLQ8WZ73 363 aa6.87□□□□□ -1.31
RTFDC1-206ENST00000477485 KAT5Q92993 513 aa6.87□□□□□ -1.31
RTFDC1-206ENST00000477485 VCPIP1Q96JH7 1222 aa6.87□□□□□ -1.31
RTFDC1-206ENST00000477485 BTN2A3PQ96KV6 586 aa6.87□□□□□ -1.31
RTFDC1-206ENST00000477485 APOLD1Q96LR9 279 aa6.87□□□□□ -1.31
RTFDC1-206ENST00000477485 CCDC114Q96M63 670 aa6.87□□□□□ -1.31
RTFDC1-206ENST00000477485 PPP1R9BQ96SB3 815 aa6.87□□□□□ -1.31
RTFDC1-206ENST00000477485 TRIM62Q9BVG3 475 aa6.87□□□□□ -1.31
RTFDC1-206ENST00000477485 SEMA4CQ9C0C4 833 aa6.87□□□□□ -1.31
RTFDC1-206ENST00000477485 MUC3BQ9H195 1237 aa6.87□□□□□ -1.31
RTFDC1-206ENST00000477485 KDM4CQ9H3R0 1056 aa6.87□□□□□ -1.31
RTFDC1-206ENST00000477485 CLMPQ9H6B4 373 aa6.87□□□□□ -1.31
RTFDC1-206ENST00000477485 CAAP1Q9H8G2 361 aa6.87□□□□□ -1.31
RTFDC1-206ENST00000477485 POLR1BQ9H9Y6 1135 aa6.87□□□□□ -1.31
RTFDC1-206ENST00000477485 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.87□□□□□ -1.31
RTFDC1-206ENST00000477485 ARHGAP20Q9P2F6 1191 aa6.87□□□□□ -1.31
RTFDC1-206ENST00000477485 IPO11Q9UI26 975 aaKnown RBP6.87□□□□□ -1.31
RTFDC1-206ENST00000477485 RCOR1Q9UKL0 485 aa6.87□□□□□ -1.31
RTFDC1-206ENST00000477485 SATB2Q9UPW6 733 aa6.87□□□□□ -1.31
RTFDC1-206ENST00000477485 HEMK1Q9Y5R4 338 aaPredicted RBP6.87□□□□□ -1.31
RTFDC1-206ENST00000477485 COL27A1Q8IZC6 1860 aaPredicted RBP6.87□□□□□ -1.31
RTFDC1-206ENST00000477485 DOCK4Q8N1I0 1966 aa6.86□□□□□ -1.31
RTFDC1-206ENST00000477485 ANKRD36A6QL64 1941 aa6.86□□□□□ -1.31
RTFDC1-206ENST00000477485 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP6.86□□□□□ -1.31
RTFDC1-206ENST00000477485 TRIM49BA6NDI0 452 aa6.86□□□□□ -1.31
RTFDC1-206ENST00000477485 TCAF2A6NFQ2 919 aa6.86□□□□□ -1.31
RTFDC1-206ENST00000477485 NEMP2A6NFY4 417 aa6.86□□□□□ -1.31
RTFDC1-206ENST00000477485 A6NNZ2 444 aa6.86□□□□□ -1.31
RTFDC1-206ENST00000477485 KCNU1A8MYU2 1149 aa6.86□□□□□ -1.31
RTFDC1-206ENST00000477485 H3BM21 787 aa6.86□□□□□ -1.31
RTFDC1-206ENST00000477485 RNF225M0QZC1 329 aaPredicted RBP6.86□□□□□ -1.31
RTFDC1-206ENST00000477485 GRAP2O75791 330 aa6.86□□□□□ -1.31
RTFDC1-206ENST00000477485 GABBR2O75899 941 aa6.86□□□□□ -1.31
RTFDC1-206ENST00000477485 PIAS2O75928 621 aa6.86□□□□□ -1.31
RTFDC1-206ENST00000477485 FYNP06241 537 aa6.86□□□□□ -1.31
RTFDC1-206ENST00000477485 C7P10643 843 aa6.86□□□□□ -1.31
RTFDC1-206ENST00000477485 CKMT1AP12532 417 aa6.86□□□□□ -1.31
RTFDC1-206ENST00000477485 PRCPP42785 496 aa6.86□□□□□ -1.31
RTFDC1-206ENST00000477485 RECQLP46063 649 aaPredicted RBP6.86□□□□□ -1.31
RTFDC1-206ENST00000477485 FMO5P49326 533 aa6.86□□□□□ -1.31
RTFDC1-206ENST00000477485 OXCT1P55809 520 aa6.86□□□□□ -1.31
RTFDC1-206ENST00000477485 FKBP3Q00688 224 aaKnown RBP6.86□□□□□ -1.31
RTFDC1-206ENST00000477485 KCNC4Q03721 635 aa6.86□□□□□ -1.31
RTFDC1-206ENST00000477485 VAC14Q08AM6 782 aa6.86□□□□□ -1.31
RTFDC1-206ENST00000477485 CCDC15Q0P6D6 951 aa6.86□□□□□ -1.31
RTFDC1-206ENST00000477485 NME3Q13232 169 aa6.86□□□□□ -1.31
RTFDC1-206ENST00000477485 ZNF177Q13360 481 aaPredicted RBP6.86□□□□□ -1.31
RTFDC1-206ENST00000477485 NNTQ13423 1086 aa6.86□□□□□ -1.31
RTFDC1-206ENST00000477485 PNOCQ13519 176 aa6.86□□□□□ -1.31
RTFDC1-206ENST00000477485 SLC12A1Q13621 1099 aa6.86□□□□□ -1.31
RTFDC1-206ENST00000477485 STILQ15468 1287 aa6.86□□□□□ -1.31
RTFDC1-206ENST00000477485 CNGA2Q16280 664 aa6.86□□□□□ -1.31
RTFDC1-206ENST00000477485 CDKN3Q16667 212 aa6.86□□□□□ -1.31
RTFDC1-206ENST00000477485 C6orf132Q5T0Z8 1188 aa6.86□□□□□ -1.31
RTFDC1-206ENST00000477485 TTC39BQ5VTQ0 682 aaPredicted RBP6.86□□□□□ -1.31
RTFDC1-206ENST00000477485 CCDC81Q6ZN84 652 aa6.86□□□□□ -1.31
RTFDC1-206ENST00000477485 ATP11CQ8NB49 1132 aa6.86□□□□□ -1.31
RTFDC1-206ENST00000477485 ERCC4Q92889 916 aaPredicted RBP6.86□□□□□ -1.31
RTFDC1-206ENST00000477485 ARRDC3Q96B67 414 aa6.86□□□□□ -1.31
RTFDC1-206ENST00000477485 SLC39A13Q96H72 371 aa6.86□□□□□ -1.31
RTFDC1-206ENST00000477485 HSFY1Q96LI6 401 aa6.86□□□□□ -1.31
RTFDC1-206ENST00000477485 NOX5Q96PH1 765 aa6.86□□□□□ -1.31
RTFDC1-206ENST00000477485 TRIM4Q9C037 500 aa6.86□□□□□ -1.31
RTFDC1-206ENST00000477485 FAM117AQ9C073 453 aa6.86□□□□□ -1.31
RTFDC1-206ENST00000477485 SIK2Q9H0K1 926 aa6.86□□□□□ -1.31
RTFDC1-206ENST00000477485 POPDC2Q9HBU9 364 aa6.86□□□□□ -1.31
RTFDC1-206ENST00000477485 PREBQ9HCU5 417 aa6.86□□□□□ -1.31
RTFDC1-206ENST00000477485 KLHL11Q9NVR0 708 aa6.86□□□□□ -1.31
RTFDC1-206ENST00000477485 RMND1Q9NWS8 449 aa6.86□□□□□ -1.31
RTFDC1-206ENST00000477485 DDIT4Q9NX09 232 aa6.86□□□□□ -1.31
RTFDC1-206ENST00000477485 NLGN3Q9NZ94 848 aa6.86□□□□□ -1.31
RTFDC1-206ENST00000477485 VANGL2Q9ULK5 521 aa6.86□□□□□ -1.31
RTFDC1-206ENST00000477485 HPSEQ9Y251 543 aa6.86□□□□□ -1.31
RTFDC1-206ENST00000477485 RP1P56715 2156 aa6.86□□□□□ -1.31
RTFDC1-206ENST00000477485 MGAQ8IWI9 3026 aa6.86□□□□□ -1.31
RTFDC1-206ENST00000477485 LRRK1Q38SD2 2015 aa6.85□□□□□ -1.31
RTFDC1-206ENST00000477485 B8ZZF3 427 aa6.85□□□□□ -1.31
RTFDC1-206ENST00000477485 E5RJQ4 531 aa6.85□□□□□ -1.31
RTFDC1-206ENST00000477485 AGRPO00253 132 aa6.85□□□□□ -1.31
RTFDC1-206ENST00000477485 MUSKO15146 869 aa6.85□□□□□ -1.31
RTFDC1-206ENST00000477485 ALOX15BO15296 676 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms