RNA–Protein interactions for RNA: ENST00000477446.5

EPHB4-204, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 1,551 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-204ENST00000477446 TRIM31Q9BZY9 425 aa17.29■□□□□ 0.36
EPHB4-204ENST00000477446 ARHGEF3Q9NR81 526 aa17.29■□□□□ 0.36
EPHB4-204ENST00000477446 EFR3BQ9Y2G0 817 aa17.29■□□□□ 0.36
EPHB4-204ENST00000477446 DCXO43602 365 aa17.28■□□□□ 0.36
EPHB4-204ENST00000477446 CLDN11O75508 207 aa17.28■□□□□ 0.36
EPHB4-204ENST00000477446 TJP3O95049 919 aa17.28■□□□□ 0.36
EPHB4-204ENST00000477446 MYZAPP0CAP1 466 aa17.28■□□□□ 0.36
EPHB4-204ENST00000477446 KDELR1P24390 212 aa17.28■□□□□ 0.36
EPHB4-204ENST00000477446 HTR7P34969 479 aa17.28■□□□□ 0.36
EPHB4-204ENST00000477446 ARL4AP40617 200 aa17.28■□□□□ 0.36
EPHB4-204ENST00000477446 EIF2DP41214 584 aaKnown RBP17.28■□□□□ 0.36
EPHB4-204ENST00000477446 HCAR3P49019 387 aa17.28■□□□□ 0.36
EPHB4-204ENST00000477446 GALK1P51570 392 aa17.28■□□□□ 0.36
EPHB4-204ENST00000477446 ZNF135P52742 658 aaPredicted RBP17.28■□□□□ 0.36
EPHB4-204ENST00000477446 PLTPP55058 493 aa17.28■□□□□ 0.36
EPHB4-204ENST00000477446 SKOR1P84550 965 aa17.28■□□□□ 0.36
EPHB4-204ENST00000477446 MESP2Q0VG99 397 aa17.28■□□□□ 0.36
EPHB4-204ENST00000477446 DPYSL3Q14195 570 aa17.28■□□□□ 0.36
EPHB4-204ENST00000477446 PDK2Q15119 407 aa17.28■□□□□ 0.36
EPHB4-204ENST00000477446 ASTLQ6HA08 431 aaPredicted RBP17.28■□□□□ 0.36
EPHB4-204ENST00000477446 DRICH1Q6PGQ1 229 aaPredicted RBP17.28■□□□□ 0.36
EPHB4-204ENST00000477446 LEKR1Q6ZMV7 388 aa17.28■□□□□ 0.36
EPHB4-204ENST00000477446 TPRG1Q6ZUI0 275 aa17.28■□□□□ 0.36
EPHB4-204ENST00000477446 RFX8Q6ZV50 586 aa17.28■□□□□ 0.36
EPHB4-204ENST00000477446 CHST9Q7L1S5 443 aa17.28■□□□□ 0.36
EPHB4-204ENST00000477446 TFAP2DQ7Z6R9 452 aa17.28■□□□□ 0.36
EPHB4-204ENST00000477446 MFN1Q8IWA4 741 aa17.28■□□□□ 0.36
EPHB4-204ENST00000477446 FIBINQ8TAL6 211 aa17.28■□□□□ 0.36
EPHB4-204ENST00000477446 CCHCR1Q8TD31 782 aa17.28■□□□□ 0.36
EPHB4-204ENST00000477446 UBLCP1Q8WVY7 318 aaPredicted RBP17.28■□□□□ 0.36
EPHB4-204ENST00000477446 ART4Q93070 314 aa17.28■□□□□ 0.36
EPHB4-204ENST00000477446 SLC2A11Q9BYW1 496 aa17.28■□□□□ 0.36
EPHB4-204ENST00000477446 TMBIM4Q9HC24 238 aa17.28■□□□□ 0.36
EPHB4-204ENST00000477446 FBRSL1Q9HCM7 1045 aaKnown RBP17.28■□□□□ 0.36
EPHB4-204ENST00000477446 DNAJC17Q9NVM6 304 aaKnown RBP17.28■□□□□ 0.36
EPHB4-204ENST00000477446 GRHL1Q9NZI5 618 aa17.28■□□□□ 0.36
EPHB4-204ENST00000477446 ZNF212Q9UDV6 495 aa17.28■□□□□ 0.36
EPHB4-204ENST00000477446 NFS1Q9Y697 457 aa17.28■□□□□ 0.36
EPHB4-204ENST00000477446 LRRD1A4D1F6 860 aa17.28■□□□□ 0.36
EPHB4-204ENST00000477446 C3orf70A6NLC5 250 aaPredicted RBP17.28■□□□□ 0.36
EPHB4-204ENST00000477446 PI4K2BG5E9Z4 385 aa17.28■□□□□ 0.36
EPHB4-204ENST00000477446 H0Y626 953 aa17.28■□□□□ 0.36
EPHB4-204ENST00000477446 H3BRJ5 948 aa17.28■□□□□ 0.36
EPHB4-204ENST00000477446 NDC80O14777 642 aa17.28■□□□□ 0.36
EPHB4-204ENST00000477446 KRT1P04264 644 aa17.28■□□□□ 0.36
EPHB4-204ENST00000477446 CISD3P0C7P0 127 aa17.28■□□□□ 0.36
EPHB4-204ENST00000477446 RHOQP17081 205 aa17.28■□□□□ 0.36
EPHB4-204ENST00000477446 CD72P21854 359 aa17.28■□□□□ 0.36
EPHB4-204ENST00000477446 IL4RP24394 825 aa17.28■□□□□ 0.36
EPHB4-204ENST00000477446 RPL21P46778 160 aaKnown RBP17.28■□□□□ 0.36
EPHB4-204ENST00000477446 DGKGP49619 791 aa17.28■□□□□ 0.36
EPHB4-204ENST00000477446 PRKCQQ04759 706 aa17.28■□□□□ 0.36
EPHB4-204ENST00000477446 MMRN1Q13201 1228 aa17.28■□□□□ 0.36
EPHB4-204ENST00000477446 CDH18Q13634 790 aa17.28■□□□□ 0.36
EPHB4-204ENST00000477446 PTK6Q13882 451 aa17.28■□□□□ 0.36
EPHB4-204ENST00000477446 UAP1Q16222 522 aaPredicted RBP17.28■□□□□ 0.36
EPHB4-204ENST00000477446 FSCBQ5H9T9 825 aa17.28■□□□□ 0.36
EPHB4-204ENST00000477446 CEP85LQ5SZL2 805 aa17.28■□□□□ 0.36
EPHB4-204ENST00000477446 ZDHHC24Q6UX98 284 aa17.28■□□□□ 0.36
EPHB4-204ENST00000477446 CEP128Q6ZU80 1094 aa17.28■□□□□ 0.36
EPHB4-204ENST00000477446 NLRP14Q86W24 1093 aa17.28■□□□□ 0.36
EPHB4-204ENST00000477446 MAP7D3Q8IWC1 876 aa17.28■□□□□ 0.36
EPHB4-204ENST00000477446 SIX5Q8N196 739 aa17.28■□□□□ 0.36
EPHB4-204ENST00000477446 ARFGAP2Q8N6H7 521 aa17.28■□□□□ 0.36
EPHB4-204ENST00000477446 EDAQ92838 391 aa17.28■□□□□ 0.36
EPHB4-204ENST00000477446 ARL8AQ96BM9 186 aa17.28■□□□□ 0.36
EPHB4-204ENST00000477446 MSANTD3Q96H12 275 aa17.28■□□□□ 0.36
EPHB4-204ENST00000477446 ATP6V1G3Q96LB4 118 aa17.28■□□□□ 0.36
EPHB4-204ENST00000477446 CSPG4P5Q96PW8 444 aa17.28■□□□□ 0.36
EPHB4-204ENST00000477446 P2RY13Q9BPV8 354 aa17.28■□□□□ 0.36
EPHB4-204ENST00000477446 CALN1Q9BXU9 219 aa17.28■□□□□ 0.36
EPHB4-204ENST00000477446 FRMD8P1Q9BZ68 369 aaPredicted RBP17.28■□□□□ 0.36
EPHB4-204ENST00000477446 PABPC3Q9H361 631 aaKnown RBP17.28■□□□□ 0.36
EPHB4-204ENST00000477446 DEC1Q9P2X7 70 aa17.28■□□□□ 0.36
EPHB4-204ENST00000477446 BDP1A6H8Y1 2624 aa17.27■□□□□ 0.36
EPHB4-204ENST00000477446 MUC3AQ02505 3323 aa17.27■□□□□ 0.35
EPHB4-204ENST00000477446 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.27■□□□□ 0.35
EPHB4-204ENST00000477446 NUDT17P0C025 328 aa17.27■□□□□ 0.35
EPHB4-204ENST00000477446 HLA-FP30511 346 aa17.27■□□□□ 0.35
EPHB4-204ENST00000477446 ACTN2P35609 894 aa17.27■□□□□ 0.35
EPHB4-204ENST00000477446 PMS2P54278 862 aa17.27■□□□□ 0.35
EPHB4-204ENST00000477446 ZNF177Q13360 481 aaPredicted RBP17.27■□□□□ 0.35
EPHB4-204ENST00000477446 DPYSQ14117 519 aa17.27■□□□□ 0.35
EPHB4-204ENST00000477446 PON2Q15165 354 aa17.27■□□□□ 0.35
EPHB4-204ENST00000477446 TTMPQ5BVD1 217 aa17.27■□□□□ 0.35
EPHB4-204ENST00000477446 AGBL2Q5U5Z8 902 aa17.27■□□□□ 0.35
EPHB4-204ENST00000477446 CXorf57Q6NSI4 855 aaKnown RBP17.27■□□□□ 0.35
EPHB4-204ENST00000477446 CCDC117Q8IWD4 279 aaPredicted RBP17.27■□□□□ 0.35
EPHB4-204ENST00000477446 PHTF2Q8N3S3 785 aa17.27■□□□□ 0.35
EPHB4-204ENST00000477446 CCDC89Q8N998 374 aa17.27■□□□□ 0.35
EPHB4-204ENST00000477446 OR52K2Q8NGK3 314 aa17.27■□□□□ 0.35
EPHB4-204ENST00000477446 FBXO25Q8TCJ0 367 aa17.27■□□□□ 0.35
EPHB4-204ENST00000477446 C1orf54Q8WWF1 131 aa17.27■□□□□ 0.35
EPHB4-204ENST00000477446 FAM3CQ92520 227 aa17.27■□□□□ 0.35
EPHB4-204ENST00000477446 RNF25Q96BH1 459 aaPredicted RBP17.27■□□□□ 0.35
EPHB4-204ENST00000477446 RETREG1Q9H6L5 497 aa17.27■□□□□ 0.35
EPHB4-204ENST00000477446 CATSPERBQ9H7T0 1116 aa17.27■□□□□ 0.35
EPHB4-204ENST00000477446 NDFIP2Q9NV92 336 aa17.27■□□□□ 0.35
EPHB4-204ENST00000477446 TMEM248Q9NWD8 314 aa17.27■□□□□ 0.35
EPHB4-204ENST00000477446 RCOR3Q9P2K3 495 aaPredicted RBP17.27■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms