RNA–Protein interactions for RNA: ENST00000477299.5

COPS3-207, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 656 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-207ENST00000477299 KIAA1211LQ6NV74 962 aa16.25■□□□□ 0.19
COPS3-207ENST00000477299 TSSK4Q6SA08 328 aa16.25■□□□□ 0.19
COPS3-207ENST00000477299 B4GALNT4Q76KP1 1039 aa16.25■□□□□ 0.19
COPS3-207ENST00000477299 EXOC4Q96A65 974 aa16.25■□□□□ 0.19
COPS3-207ENST00000477299 CALR3Q96L12 384 aaKnown RBP16.25■□□□□ 0.19
COPS3-207ENST00000477299 ZNF670Q9BS34 389 aa16.25■□□□□ 0.19
COPS3-207ENST00000477299 HEMGNQ9BXL5 484 aa16.25■□□□□ 0.19
COPS3-207ENST00000477299 SAE1Q9UBE0 346 aaPredicted RBP16.25■□□□□ 0.19
COPS3-207ENST00000477299 STON1Q9Y6Q2 735 aa16.25■□□□□ 0.19
COPS3-207ENST00000477299 DFFAO00273 331 aa16.24■□□□□ 0.19
COPS3-207ENST00000477299 ZSCAN12O43309 604 aa16.24■□□□□ 0.19
COPS3-207ENST00000477299 MFSD11O43934 449 aa16.24■□□□□ 0.19
COPS3-207ENST00000477299 ZRANB2O95218 330 aaKnown RBP eCLIP16.24■□□□□ 0.19
COPS3-207ENST00000477299 DLDP09622 509 aaKnown RBP16.24■□□□□ 0.19
COPS3-207ENST00000477299 DYNLT1P63172 113 aa16.24■□□□□ 0.19
COPS3-207ENST00000477299 ECT2LQ008S8 904 aa16.24■□□□□ 0.19
COPS3-207ENST00000477299 GBE1Q04446 702 aa16.24■□□□□ 0.19
COPS3-207ENST00000477299 DMC1Q14565 340 aa16.24■□□□□ 0.19
COPS3-207ENST00000477299 FBXO43Q4G163 708 aa16.24■□□□□ 0.19
COPS3-207ENST00000477299 FNDC3BQ53EP0 1204 aaKnown RBP16.24■□□□□ 0.19
COPS3-207ENST00000477299 TMCO3Q6UWJ1 677 aa16.24■□□□□ 0.19
COPS3-207ENST00000477299 RFX6Q8HWS3 928 aa16.24■□□□□ 0.19
COPS3-207ENST00000477299 MAP7D3Q8IWC1 876 aa16.24■□□□□ 0.19
COPS3-207ENST00000477299 RCOR2Q8IZ40 523 aa16.24■□□□□ 0.19
COPS3-207ENST00000477299 CHPFQ8IZ52 775 aa16.24■□□□□ 0.19
COPS3-207ENST00000477299 MAML2Q8IZL2 1156 aaPredicted RBP16.24■□□□□ 0.19
COPS3-207ENST00000477299 SYCE1Q8N0S2 351 aa16.24■□□□□ 0.19
COPS3-207ENST00000477299 SYNPOQ8N3V7 929 aa16.24■□□□□ 0.19
COPS3-207ENST00000477299 PLD5Q8N7P1 536 aa16.24■□□□□ 0.19
COPS3-207ENST00000477299 DTWD2Q8NBA8 298 aa16.24■□□□□ 0.19
COPS3-207ENST00000477299 EXD1Q8NHP7 514 aa16.24■□□□□ 0.19
COPS3-207ENST00000477299 TLR10Q9BXR5 811 aa16.24■□□□□ 0.19
COPS3-207ENST00000477299 SLC6A17Q9H1V8 727 aa16.24■□□□□ 0.19
COPS3-207ENST00000477299 MAGEH1Q9H213 219 aa16.24■□□□□ 0.19
COPS3-207ENST00000477299 CD248Q9HCU0 757 aa16.24■□□□□ 0.19
COPS3-207ENST00000477299 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.24■□□□□ 0.19
COPS3-207ENST00000477299 RCOR3Q9P2K3 495 aaPredicted RBP16.24■□□□□ 0.19
COPS3-207ENST00000477299 ANKRD36A6QL64 1941 aa16.23■□□□□ 0.19
COPS3-207ENST00000477299 hCG_1818297A0A087WSY0 165 aa16.23■□□□□ 0.19
COPS3-207ENST00000477299 A0A1W2PQF6 199 aa16.23■□□□□ 0.19
COPS3-207ENST00000477299 CCDC66A2RUB6 948 aa16.23■□□□□ 0.19
COPS3-207ENST00000477299 CHURC1-FNTBB4DL54 471 aa16.23■□□□□ 0.19
COPS3-207ENST00000477299 TIMM44O43615 452 aa16.23■□□□□ 0.19
COPS3-207ENST00000477299 KDELR3O43731 214 aa16.23■□□□□ 0.19
COPS3-207ENST00000477299 SRCP12931 536 aa16.23■□□□□ 0.19
COPS3-207ENST00000477299 NTSR1P30989 418 aa16.23■□□□□ 0.19
COPS3-207ENST00000477299 PXNP49023 591 aaPredicted RBP16.23■□□□□ 0.19
COPS3-207ENST00000477299 ZNF135P52742 658 aaPredicted RBP16.23■□□□□ 0.19
COPS3-207ENST00000477299 DMWDQ09019 674 aa16.23■□□□□ 0.19
COPS3-207ENST00000477299 SERINC3Q13530 473 aa16.23■□□□□ 0.19
COPS3-207ENST00000477299 ENPP2Q13822 863 aa16.23■□□□□ 0.19
COPS3-207ENST00000477299 EIF4HQ15056 248 aaKnown RBP16.23■□□□□ 0.19
COPS3-207ENST00000477299 PREPLQ4J6C6 727 aaPredicted RBP16.23■□□□□ 0.19
COPS3-207ENST00000477299 ZNF569Q5MCW4 686 aa16.23■□□□□ 0.19
COPS3-207ENST00000477299 ZNF783Q6ZMS7 281 aa16.23■□□□□ 0.19
COPS3-207ENST00000477299 NUDT18Q6ZVK8 323 aa16.23■□□□□ 0.19
COPS3-207ENST00000477299 ZNF354CQ86Y25 554 aa16.23■□□□□ 0.19
COPS3-207ENST00000477299 CCDC50Q8IVM0 306 aa16.23■□□□□ 0.19
COPS3-207ENST00000477299 SLC35F6Q8N357 371 aa16.23■□□□□ 0.19
COPS3-207ENST00000477299 SPEM1Q8N4L4 309 aa16.23■□□□□ 0.19
COPS3-207ENST00000477299 ZNF557Q8N988 423 aaPredicted RBP16.23■□□□□ 0.19
COPS3-207ENST00000477299 UCMAQ8WVF2 138 aa16.23■□□□□ 0.19
COPS3-207ENST00000477299 C1QTNF1Q9BXJ1 281 aa16.23■□□□□ 0.19
COPS3-207ENST00000477299 TMEM245Q9H330 911 aa16.23■□□□□ 0.19
COPS3-207ENST00000477299 RETREG1Q9H6L5 497 aa16.23■□□□□ 0.19
COPS3-207ENST00000477299 SPATA6Q9NWH7 488 aaPredicted RBP16.23■□□□□ 0.19
COPS3-207ENST00000477299 MMP17Q9ULZ9 603 aa16.23■□□□□ 0.19
COPS3-207ENST00000477299 TCRBV7S2A1N4TA0A589 114 aa16.22■□□□□ 0.19
COPS3-207ENST00000477299 ENC1O14682 589 aa16.22■□□□□ 0.19
COPS3-207ENST00000477299 CST8O60676 142 aa16.22■□□□□ 0.19
COPS3-207ENST00000477299 ZNF821O75541 412 aaPredicted RBP16.22■□□□□ 0.19
COPS3-207ENST00000477299 ATP5BP06576 529 aaKnown RBP16.22■□□□□ 0.19
COPS3-207ENST00000477299 PECAM1P16284 738 aaPredicted RBP16.22■□□□□ 0.19
COPS3-207ENST00000477299 NDST2P52849 883 aa16.22■□□□□ 0.19
COPS3-207ENST00000477299 OXCT1P55809 520 aa16.22■□□□□ 0.19
COPS3-207ENST00000477299 RWDD2BP57060 319 aa16.22■□□□□ 0.19
COPS3-207ENST00000477299 YBEYP58557 167 aaPredicted RBP16.22■□□□□ 0.19
COPS3-207ENST00000477299 PAFAH1B3Q15102 231 aaKnown RBP16.22■□□□□ 0.19
COPS3-207ENST00000477299 SLC9A4Q6AI14 798 aa16.22■□□□□ 0.19
COPS3-207ENST00000477299 DCAF4L2Q8NA75 395 aa16.22■□□□□ 0.19
COPS3-207ENST00000477299 FRS2Q8WU20 508 aa16.22■□□□□ 0.19
COPS3-207ENST00000477299 HHIPQ96QV1 700 aa16.22■□□□□ 0.19
COPS3-207ENST00000477299 GABRG3Q99928 467 aa16.22■□□□□ 0.19
COPS3-207ENST00000477299 PLA2G4CQ9UP65 541 aa16.22■□□□□ 0.19
COPS3-207ENST00000477299 FCF1Q9Y324 198 aaKnown RBP16.22■□□□□ 0.19
COPS3-207ENST00000477299 RNF103O00237 685 aa16.21■□□□□ 0.19
COPS3-207ENST00000477299 ASLP04424 464 aa16.21■□□□□ 0.19
COPS3-207ENST00000477299 EPHX1P07099 455 aa16.21■□□□□ 0.19
COPS3-207ENST00000477299 HOXB2P14652 356 aa16.21■□□□□ 0.19
COPS3-207ENST00000477299 DLG2Q15700 870 aa16.21■□□□□ 0.19
COPS3-207ENST00000477299 CRY1Q16526 586 aa16.21■□□□□ 0.19
COPS3-207ENST00000477299 PARP15Q460N3 678 aa16.21■□□□□ 0.19
COPS3-207ENST00000477299 ODF2Q5BJF6 829 aa16.21■□□□□ 0.19
COPS3-207ENST00000477299 TFDP3Q5H9I0 405 aa16.21■□□□□ 0.19
COPS3-207ENST00000477299 SERPINA13PQ6UXR4 307 aa16.21■□□□□ 0.19
COPS3-207ENST00000477299 SYT13Q7L8C5 426 aa16.21■□□□□ 0.19
COPS3-207ENST00000477299 SH2D3CQ8N5H7 860 aa16.21■□□□□ 0.19
COPS3-207ENST00000477299 PTPRN2Q92932 1015 aa16.21■□□□□ 0.19
COPS3-207ENST00000477299 HAUS1Q96CS2 278 aa16.21■□□□□ 0.19
COPS3-207ENST00000477299 FAM118BQ9BPY3 351 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms