RNA–Protein interactions for RNA: ENST00000477289.1

NSMCE4A-208, Transcript of NSE4 homolog A, SMC5-SMC6 complex component, humanhuman

TSL 2

Gene NSMCE4A, Length 643 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE4A-208ENST00000477289 FAM163BP0C2L3 166 aa4.78□□□□□ -1.64
NSMCE4A-208ENST00000477289 TYMPP19971 482 aa4.78□□□□□ -1.64
NSMCE4A-208ENST00000477289 TBXAS1P24557 533 aaPredicted RBP4.78□□□□□ -1.64
NSMCE4A-208ENST00000477289 HOXD13P35453 343 aa4.78□□□□□ -1.64
NSMCE4A-208ENST00000477289 GCLMP48507 274 aa4.78□□□□□ -1.64
NSMCE4A-208ENST00000477289 LHX1P48742 406 aa4.78□□□□□ -1.64
NSMCE4A-208ENST00000477289 CASP4P49662 377 aa4.78□□□□□ -1.64
NSMCE4A-208ENST00000477289 MECP2P51608 486 aaKnown RBP4.78□□□□□ -1.64
NSMCE4A-208ENST00000477289 MFAP3P55082 362 aa4.78□□□□□ -1.64
NSMCE4A-208ENST00000477289 ARPP19P56211 112 aa4.78□□□□□ -1.64
NSMCE4A-208ENST00000477289 SLC8A3P57103 927 aa4.78□□□□□ -1.64
NSMCE4A-208ENST00000477289 ADAM8P78325 824 aa4.78□□□□□ -1.64
NSMCE4A-208ENST00000477289 DSC1Q08554 894 aa4.78□□□□□ -1.64
NSMCE4A-208ENST00000477289 SMARCB1Q12824 385 aa4.78□□□□□ -1.64
NSMCE4A-208ENST00000477289 KCNJ12Q14500 433 aa4.78□□□□□ -1.64
NSMCE4A-208ENST00000477289 MAPRE1Q15691 268 aaKnown RBP4.78□□□□□ -1.64
NSMCE4A-208ENST00000477289 PSMD5Q16401 504 aa4.78□□□□□ -1.64
NSMCE4A-208ENST00000477289 MAN2A1Q16706 1144 aa4.78□□□□□ -1.64
NSMCE4A-208ENST00000477289 UPP1Q16831 310 aa4.78□□□□□ -1.64
NSMCE4A-208ENST00000477289 AAK1Q2M2I8 961 aa4.78□□□□□ -1.64
NSMCE4A-208ENST00000477289 CTXN3Q4LDR2 81 aa4.78□□□□□ -1.64
NSMCE4A-208ENST00000477289 ZCWPW2Q504Y3 356 aa4.78□□□□□ -1.64
NSMCE4A-208ENST00000477289 ZBTB41Q5SVQ8 909 aa4.78□□□□□ -1.64
NSMCE4A-208ENST00000477289 PLPP4Q5VZY2 271 aa4.78□□□□□ -1.64
NSMCE4A-208ENST00000477289 C9orf57Q5W0N0 161 aa4.78□□□□□ -1.64
NSMCE4A-208ENST00000477289 LMBRD2Q68DH5 695 aaPredicted RBP4.78□□□□□ -1.64
NSMCE4A-208ENST00000477289 TTI2Q6NXR4 508 aa4.78□□□□□ -1.64
NSMCE4A-208ENST00000477289 CC2D1AQ6P1N0 951 aaPredicted RBP4.78□□□□□ -1.64
NSMCE4A-208ENST00000477289 CRELD2Q6UXH1 353 aaPredicted RBP4.78□□□□□ -1.64
NSMCE4A-208ENST00000477289 GBP6Q6ZN66 633 aa4.78□□□□□ -1.64
NSMCE4A-208ENST00000477289 LRRC55Q6ZSA7 311 aa4.78□□□□□ -1.64
NSMCE4A-208ENST00000477289 CCDC149Q6ZUS6 474 aa4.78□□□□□ -1.64
NSMCE4A-208ENST00000477289 TMPRSS6Q8IU80 811 aa4.78□□□□□ -1.64
NSMCE4A-208ENST00000477289 ELMOD1Q8N336 334 aa4.78□□□□□ -1.64
NSMCE4A-208ENST00000477289 AOPEPQ8N6M6 819 aa4.78□□□□□ -1.64
NSMCE4A-208ENST00000477289 OR6B3Q8NGW1 331 aa4.78□□□□□ -1.64
NSMCE4A-208ENST00000477289 SPATA18Q8TC71 538 aa4.78□□□□□ -1.64
NSMCE4A-208ENST00000477289 HASPINQ8TF76 798 aa4.78□□□□□ -1.64
NSMCE4A-208ENST00000477289 GDPD5Q8WTR4 605 aa4.78□□□□□ -1.64
NSMCE4A-208ENST00000477289 RIN2Q8WYP3 895 aaPredicted RBP4.78□□□□□ -1.64
NSMCE4A-208ENST00000477289 RABGGTAQ92696 567 aa4.78□□□□□ -1.64
NSMCE4A-208ENST00000477289 C18orf25Q96B23 403 aaPredicted RBP4.78□□□□□ -1.64
NSMCE4A-208ENST00000477289 ZG16BQ96DA0 208 aa4.78□□□□□ -1.64
NSMCE4A-208ENST00000477289 MRPL38Q96DV4 380 aaKnown RBP4.78□□□□□ -1.64
NSMCE4A-208ENST00000477289 FAXDC2Q96IV6 333 aa4.78□□□□□ -1.64
NSMCE4A-208ENST00000477289 TNIP3Q96KP6 325 aa4.78□□□□□ -1.64
NSMCE4A-208ENST00000477289 SENP8Q96LD8 212 aa4.78□□□□□ -1.64
NSMCE4A-208ENST00000477289 NT5C1BQ96P26 610 aa4.78□□□□□ -1.64
NSMCE4A-208ENST00000477289 FOXB1Q99853 325 aa4.78□□□□□ -1.64
NSMCE4A-208ENST00000477289 BPIFA3Q9BQP9 254 aa4.78□□□□□ -1.64
NSMCE4A-208ENST00000477289 TUBGCP2Q9BSJ2 902 aa4.78□□□□□ -1.64
NSMCE4A-208ENST00000477289 HERC2P3Q9BVR0 1158 aa4.78□□□□□ -1.64
NSMCE4A-208ENST00000477289 HAPLN2Q9GZV7 340 aa4.78□□□□□ -1.64
NSMCE4A-208ENST00000477289 AURKAIP1Q9NWT8 199 aaPredicted RBP4.78□□□□□ -1.64
NSMCE4A-208ENST00000477289 RAB20Q9NX57 234 aa4.78□□□□□ -1.64
NSMCE4A-208ENST00000477289 MIOSQ9NXC5 875 aa4.78□□□□□ -1.64
NSMCE4A-208ENST00000477289 DNAJB4Q9UDY4 337 aa4.78□□□□□ -1.64
NSMCE4A-208ENST00000477289 TUBGCP4Q9UGJ1 667 aa4.78□□□□□ -1.64
NSMCE4A-208ENST00000477289 MAGEL2Q9UJ55 1249 aa4.78□□□□□ -1.64
NSMCE4A-208ENST00000477289 FAM50BQ9Y247 325 aa4.78□□□□□ -1.64
NSMCE4A-208ENST00000477289 VWA7Q9Y334 891 aa4.78□□□□□ -1.64
NSMCE4A-208ENST00000477289 SNX9Q9Y5X1 595 aa4.78□□□□□ -1.64
NSMCE4A-208ENST00000477289 SIP14410 1827 aa4.78□□□□□ -1.64
NSMCE4A-208ENST00000477289 C2orf78A6NCI8 922 aa4.77□□□□□ -1.65
NSMCE4A-208ENST00000477289 A8MXQ7 604 aa4.77□□□□□ -1.65
NSMCE4A-208ENST00000477289 PIRO00625 290 aa4.77□□□□□ -1.65
NSMCE4A-208ENST00000477289 PRRG1O14668 218 aa4.77□□□□□ -1.65
NSMCE4A-208ENST00000477289 FAM189A1O60320 539 aa4.77□□□□□ -1.65
NSMCE4A-208ENST00000477289 GLUD1P00367 558 aa4.77□□□□□ -1.65
NSMCE4A-208ENST00000477289 HLA-DRAP01903 254 aa4.77□□□□□ -1.65
NSMCE4A-208ENST00000477289 CCDC172P0C7W6 258 aa4.77□□□□□ -1.65
NSMCE4A-208ENST00000477289 TRIM49P0CI25 452 aa4.77□□□□□ -1.65
NSMCE4A-208ENST00000477289 TRIM49CP0CI26 452 aa4.77□□□□□ -1.65
NSMCE4A-208ENST00000477289 CTSAP10619 480 aa4.77□□□□□ -1.65
NSMCE4A-208ENST00000477289 ANXA13P27216 316 aa4.77□□□□□ -1.65
NSMCE4A-208ENST00000477289 PBX3P40426 434 aa4.77□□□□□ -1.65
NSMCE4A-208ENST00000477289 BRCC3P46736 316 aa4.77□□□□□ -1.65
NSMCE4A-208ENST00000477289 FMO5P49326 533 aa4.77□□□□□ -1.65
NSMCE4A-208ENST00000477289 NDUFV1P49821 464 aa4.77□□□□□ -1.65
NSMCE4A-208ENST00000477289 LILRA4P59901 499 aa4.77□□□□□ -1.65
NSMCE4A-208ENST00000477289 MYL6P60660 151 aa4.77□□□□□ -1.65
NSMCE4A-208ENST00000477289 DSG1Q02413 1049 aa4.77□□□□□ -1.65
NSMCE4A-208ENST00000477289 HHEXQ03014 270 aa4.77□□□□□ -1.65
NSMCE4A-208ENST00000477289 PLD1Q13393 1074 aa4.77□□□□□ -1.65
NSMCE4A-208ENST00000477289 VEPH1Q14D04 833 aa4.77□□□□□ -1.65
NSMCE4A-208ENST00000477289 SYCP1Q15431 976 aa4.77□□□□□ -1.65
NSMCE4A-208ENST00000477289 ZBTB6Q15916 424 aa4.77□□□□□ -1.65
NSMCE4A-208ENST00000477289 NFE2Q16621 373 aaPredicted RBP4.77□□□□□ -1.65
NSMCE4A-208ENST00000477289 EXOC3L4Q17RC7 722 aa4.77□□□□□ -1.65
NSMCE4A-208ENST00000477289 ZACNQ401N2 412 aa4.77□□□□□ -1.65
NSMCE4A-208ENST00000477289 TCP11X2Q5H9J9 407 aa4.77□□□□□ -1.65
NSMCE4A-208ENST00000477289 CES5AQ6NT32 575 aa4.77□□□□□ -1.65
NSMCE4A-208ENST00000477289 KLHDC10Q6PID8 442 aa4.77□□□□□ -1.65
NSMCE4A-208ENST00000477289 C4orf50Q6ZRC1 276 aa4.77□□□□□ -1.65
NSMCE4A-208ENST00000477289 ENOSF1Q7L5Y1 443 aa4.77□□□□□ -1.65
NSMCE4A-208ENST00000477289 LDLRAD3Q86YD5 345 aa4.77□□□□□ -1.65
NSMCE4A-208ENST00000477289 SPATA2LQ8IUW3 424 aaPredicted RBP4.77□□□□□ -1.65
NSMCE4A-208ENST00000477289 EFCAB13Q8IY85 973 aa4.77□□□□□ -1.65
NSMCE4A-208ENST00000477289 ADGRF2Q8IZF7 708 aa4.77□□□□□ -1.65
NSMCE4A-208ENST00000477289 PPM1KQ8N3J5 372 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms