RNA–Protein interactions for RNA: ENST00000477182.5

LSM2-212, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-212ENST00000477182 ERVH48-1M5A8F1 160 aa11.93□□□□□ -0.5
LSM2-212ENST00000477182 MSI1O43347 362 aaKnown RBP11.93□□□□□ -0.5
LSM2-212ENST00000477182 COCHO43405 550 aa11.93□□□□□ -0.5
LSM2-212ENST00000477182 PROSCO94903 275 aa11.93□□□□□ -0.5
LSM2-212ENST00000477182 TRUB2O95900 331 aaKnown RBP11.93□□□□□ -0.5
LSM2-212ENST00000477182 OAS1P00973 400 aaKnown RBP11.93□□□□□ -0.5
LSM2-212ENST00000477182 CYP17A1P05093 508 aa11.93□□□□□ -0.5
LSM2-212ENST00000477182 PFKLP17858 780 aa11.93□□□□□ -0.5
LSM2-212ENST00000477182 HDCP19113 662 aa11.93□□□□□ -0.5
LSM2-212ENST00000477182 PTPN9P43378 593 aa11.93□□□□□ -0.5
LSM2-212ENST00000477182 TUBP50607 506 aa11.93□□□□□ -0.5
LSM2-212ENST00000477182 PIGHQ14442 188 aaPredicted RBP11.93□□□□□ -0.5
LSM2-212ENST00000477182 RAB6CQ53S08 254 aa11.93□□□□□ -0.5
LSM2-212ENST00000477182 DBX2Q6ZNG2 339 aa11.93□□□□□ -0.5
LSM2-212ENST00000477182 ZSCAN30Q86W11 494 aa11.93□□□□□ -0.5
LSM2-212ENST00000477182 TMPRSS12Q86WS5 348 aa11.93□□□□□ -0.5
LSM2-212ENST00000477182 MARCH9Q86YJ5 346 aa11.93□□□□□ -0.5
LSM2-212ENST00000477182 ADGRG2Q8IZP9 1017 aa11.93□□□□□ -0.5
LSM2-212ENST00000477182 ZNF276Q8N554 614 aa11.93□□□□□ -0.5
LSM2-212ENST00000477182 FAM172AQ8WUF8 416 aa11.93□□□□□ -0.5
LSM2-212ENST00000477182 NT5C3BQ969T7 300 aa11.93□□□□□ -0.5
LSM2-212ENST00000477182 WBP1Q96G27 269 aa11.93□□□□□ -0.5
LSM2-212ENST00000477182 NACA2Q9H009 215 aa11.93□□□□□ -0.5
LSM2-212ENST00000477182 RNF38Q9H0F5 515 aa11.93□□□□□ -0.5
LSM2-212ENST00000477182 RAB6CQ9H0N0 254 aa11.93□□□□□ -0.5
LSM2-212ENST00000477182 GAREM1Q9H706 876 aa11.93□□□□□ -0.5
LSM2-212ENST00000477182 FAM204AQ9H8W3 233 aa11.93□□□□□ -0.5
LSM2-212ENST00000477182 OLA1Q9NTK5 396 aaKnown RBP11.93□□□□□ -0.5
LSM2-212ENST00000477182 DDIT4Q9NX09 232 aa11.93□□□□□ -0.5
LSM2-212ENST00000477182 RRN3Q9NYV6 651 aa11.93□□□□□ -0.5
LSM2-212ENST00000477182 MARCH2Q9P0N8 246 aa11.93□□□□□ -0.5
LSM2-212ENST00000477182 COX16Q9P0S2 106 aa11.93□□□□□ -0.5
LSM2-212ENST00000477182 HYOU1Q9Y4L1 999 aa11.93□□□□□ -0.5
LSM2-212ENST00000477182 UNC79Q9P2D8 2635 aa11.93□□□□□ -0.5
LSM2-212ENST00000477182 TNFSF14O43557 240 aa11.92□□□□□ -0.5
LSM2-212ENST00000477182 PALMO75781 387 aa11.92□□□□□ -0.5
LSM2-212ENST00000477182 RNF8O76064 485 aa11.92□□□□□ -0.5
LSM2-212ENST00000477182 ADH1CP00326 375 aa11.92□□□□□ -0.5
LSM2-212ENST00000477182 IGLV3-25P01717 112 aa11.92□□□□□ -0.5
LSM2-212ENST00000477182 DESP17661 470 aa11.92□□□□□ -0.5
LSM2-212ENST00000477182 ATP5C1P36542 298 aaKnown RBP11.92□□□□□ -0.5
LSM2-212ENST00000477182 SLC6A11P48066 632 aa11.92□□□□□ -0.5
LSM2-212ENST00000477182 DEUP1Q05D60 604 aa11.92□□□□□ -0.5
LSM2-212ENST00000477182 NME3Q13232 169 aa11.92□□□□□ -0.5
LSM2-212ENST00000477182 DHCR24Q15392 516 aa11.92□□□□□ -0.5
LSM2-212ENST00000477182 TAF1BQ53T94 588 aaPredicted RBP11.92□□□□□ -0.5
LSM2-212ENST00000477182 C6orf118Q5T5N4 469 aa11.92□□□□□ -0.5
LSM2-212ENST00000477182 C11orf63Q6NUN7 778 aa11.92□□□□□ -0.5
LSM2-212ENST00000477182 DAAM2Q86T65 1068 aa11.92□□□□□ -0.5
LSM2-212ENST00000477182 TADA2BQ86TJ2 420 aa11.92□□□□□ -0.5
LSM2-212ENST00000477182 MIB1Q86YT6 1006 aa11.92□□□□□ -0.5
LSM2-212ENST00000477182 SFTPA1Q8IWL2 248 aa11.92□□□□□ -0.5
LSM2-212ENST00000477182 ZNF513Q8N8E2 541 aaPredicted RBP11.92□□□□□ -0.5
LSM2-212ENST00000477182 NIPA2Q8N8Q9 360 aa11.92□□□□□ -0.5
LSM2-212ENST00000477182 LRRC57Q8N9N7 239 aa11.92□□□□□ -0.5
LSM2-212ENST00000477182 CENPIQ92674 756 aaPredicted RBP11.92□□□□□ -0.5
LSM2-212ENST00000477182 CALR3Q96L12 384 aaKnown RBP11.92□□□□□ -0.5
LSM2-212ENST00000477182 CDK5RAP1Q96SZ6 601 aaKnown RBP11.92□□□□□ -0.5
LSM2-212ENST00000477182 LCMT1Q9UIC8 334 aa11.92□□□□□ -0.5
LSM2-212ENST00000477182 DNMT3LQ9UJW3 386 aa11.92□□□□□ -0.5
LSM2-212ENST00000477182 CYP8B1Q9UNU6 501 aa11.92□□□□□ -0.5
LSM2-212ENST00000477182 ATMQ13315 3056 aa11.91□□□□□ -0.5
LSM2-212ENST00000477182 SLC12A8A0AV02 714 aa11.91□□□□□ -0.5
LSM2-212ENST00000477182 TBC1D3BA6NDS4 549 aa11.91□□□□□ -0.5
LSM2-212ENST00000477182 LEFTY2O00292 366 aa11.91□□□□□ -0.5
LSM2-212ENST00000477182 PLK4O00444 970 aa11.91□□□□□ -0.5
LSM2-212ENST00000477182 IRAK2O43187 625 aa11.91□□□□□ -0.5
LSM2-212ENST00000477182 KIF5CO60282 957 aa11.91□□□□□ -0.5
LSM2-212ENST00000477182 LRCH4O75427 683 aa11.91□□□□□ -0.5
LSM2-212ENST00000477182 WISP1O95388 367 aa11.91□□□□□ -0.5
LSM2-212ENST00000477182 FTCDO95954 541 aa11.91□□□□□ -0.5
LSM2-212ENST00000477182 NTRK1P04629 796 aa11.91□□□□□ -0.5
LSM2-212ENST00000477182 HMBSP08397 361 aa11.91□□□□□ -0.5
LSM2-212ENST00000477182 MBL2P11226 248 aaPredicted RBP11.91□□□□□ -0.5
LSM2-212ENST00000477182 HOXB2P14652 356 aa11.91□□□□□ -0.5
LSM2-212ENST00000477182 TCF4P15884 667 aa11.91□□□□□ -0.5
LSM2-212ENST00000477182 COMTP21964 271 aa11.91□□□□□ -0.5
LSM2-212ENST00000477182 MAN1A1P33908 653 aa11.91□□□□□ -0.5
LSM2-212ENST00000477182 HNF1BP35680 557 aa11.91□□□□□ -0.5
LSM2-212ENST00000477182 SSR1P43307 286 aaKnown RBP11.91□□□□□ -0.5
LSM2-212ENST00000477182 HDAC4P56524 1084 aa11.91□□□□□ -0.5
LSM2-212ENST00000477182 SDE2Q6IQ49 451 aa11.91□□□□□ -0.5
LSM2-212ENST00000477182 KLHDC10Q6PID8 442 aa11.91□□□□□ -0.5
LSM2-212ENST00000477182 STRADAQ7RTN6 431 aa11.91□□□□□ -0.5
LSM2-212ENST00000477182 BNIPLQ7Z465 357 aa11.91□□□□□ -0.5
LSM2-212ENST00000477182 ARFGAP1Q8N6T3 406 aa11.91□□□□□ -0.5
LSM2-212ENST00000477182 DNASE2BQ8WZ79 361 aa11.91□□□□□ -0.5
LSM2-212ENST00000477182 PGAP3Q96FM1 320 aaPredicted RBP11.91□□□□□ -0.5
LSM2-212ENST00000477182 SERPINB11Q96P15 392 aa11.91□□□□□ -0.5
LSM2-212ENST00000477182 ALS2CR12Q96Q35 445 aa11.91□□□□□ -0.5
LSM2-212ENST00000477182 ZDHHC4Q9NPG8 344 aa11.91□□□□□ -0.5
LSM2-212ENST00000477182 PIGVQ9NUD9 493 aa11.91□□□□□ -0.5
LSM2-212ENST00000477182 SMPD4Q9NXE4 827 aa11.91□□□□□ -0.5
LSM2-212ENST00000477182 ALG6Q9Y672 507 aa11.91□□□□□ -0.5
LSM2-212ENST00000477182 PIEZO2Q9H5I5 2752 aa11.9□□□□□ -0.5
LSM2-212ENST00000477182 MYOFQ9NZM1 2061 aa11.9□□□□□ -0.5
LSM2-212ENST00000477182 MEI4A8MW99 385 aa11.9□□□□□ -0.5
LSM2-212ENST00000477182 B8ZZF3 427 aa11.9□□□□□ -0.5
LSM2-212ENST00000477182 SPOPO43791 374 aa11.9□□□□□ -0.5
LSM2-212ENST00000477182 ENDOD1O94919 500 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms