RNA–Protein interactions for RNA: ENST00000476395.1

VAPB-205, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-205ENST00000476395 SLC10A6Q3KNW5 377 aa8.56□□□□□ -1.04
VAPB-205ENST00000476395 OTUD1Q5VV17 481 aaPredicted RBP8.56□□□□□ -1.04
VAPB-205ENST00000476395 STEAP4Q687X5 459 aa8.56□□□□□ -1.04
VAPB-205ENST00000476395 DPH6Q7L8W6 267 aa8.56□□□□□ -1.04
VAPB-205ENST00000476395 CLVS1Q8IUQ0 354 aaPredicted RBP8.56□□□□□ -1.04
VAPB-205ENST00000476395 TRIML2Q8N7C3 387 aa8.56□□□□□ -1.04
VAPB-205ENST00000476395 CLEC4CQ8WTT0 213 aa8.56□□□□□ -1.04
VAPB-205ENST00000476395 KLRG1Q96E93 195 aa8.56□□□□□ -1.04
VAPB-205ENST00000476395 SCYL1Q96KG9 808 aa8.56□□□□□ -1.04
VAPB-205ENST00000476395 WRNIP1Q96S55 665 aa8.56□□□□□ -1.04
VAPB-205ENST00000476395 MCMBPQ9BTE3 642 aa8.56□□□□□ -1.04
VAPB-205ENST00000476395 WWP1Q9H0M0 922 aa8.56□□□□□ -1.04
VAPB-205ENST00000476395 HESX1Q9UBX0 185 aa8.56□□□□□ -1.04
VAPB-205ENST00000476395 DNAJC16Q9Y2G8 782 aa8.56□□□□□ -1.04
VAPB-205ENST00000476395 ARHGAP10A1A4S6 786 aa8.55□□□□□ -1.04
VAPB-205ENST00000476395 ACKR2O00590 384 aa8.55□□□□□ -1.04
VAPB-205ENST00000476395 PPEF2O14830 753 aa8.55□□□□□ -1.04
VAPB-205ENST00000476395 CASQ2O14958 399 aaPredicted RBP8.55□□□□□ -1.04
VAPB-205ENST00000476395 AMHP03971 560 aa8.55□□□□□ -1.04
VAPB-205ENST00000476395 ITGB3P05106 788 aa8.55□□□□□ -1.04
VAPB-205ENST00000476395 AOC1P19801 751 aa8.55□□□□□ -1.04
VAPB-205ENST00000476395 GABRB3P28472 473 aa8.55□□□□□ -1.04
VAPB-205ENST00000476395 RPL10AP62906 217 aaKnown RBP8.55□□□□□ -1.04
VAPB-205ENST00000476395 MS4A2Q01362 244 aa8.55□□□□□ -1.04
VAPB-205ENST00000476395 METTL21CQ5VZV1 264 aa8.55□□□□□ -1.04
VAPB-205ENST00000476395 TIFABQ6ZNK6 161 aa8.55□□□□□ -1.04
VAPB-205ENST00000476395 NUDCD3Q8IVD9 361 aa8.55□□□□□ -1.04
VAPB-205ENST00000476395 Q8N9G6 341 aaPredicted RBP8.55□□□□□ -1.04
VAPB-205ENST00000476395 TSPAN14Q8NG11 270 aa8.55□□□□□ -1.04
VAPB-205ENST00000476395 FAM110BQ8TC76 370 aa8.55□□□□□ -1.04
VAPB-205ENST00000476395 BTBD9Q96Q07 612 aa8.55□□□□□ -1.04
VAPB-205ENST00000476395 GPATCH1Q9BRR8 931 aaKnown RBP8.55□□□□□ -1.04
VAPB-205ENST00000476395 OSBPL6Q9BZF3 934 aa8.55□□□□□ -1.04
VAPB-205ENST00000476395 C1orf21Q9H246 121 aa8.55□□□□□ -1.04
VAPB-205ENST00000476395 ZNF696Q9H7X3 374 aa8.55□□□□□ -1.04
VAPB-205ENST00000476395 SIAEQ9HAT2 523 aa8.55□□□□□ -1.04
VAPB-205ENST00000476395 TRPC7Q9HCX4 862 aa8.55□□□□□ -1.04
VAPB-205ENST00000476395 A0A1W2PPW3 197 aa8.55□□□□□ -1.04
VAPB-205ENST00000476395 KCNN4O15554 427 aa8.55□□□□□ -1.04
VAPB-205ENST00000476395 ZBTB14O43829 449 aa8.55□□□□□ -1.04
VAPB-205ENST00000476395 SERPINA6P08185 405 aa8.55□□□□□ -1.04
VAPB-205ENST00000476395 BCAP31P51572 246 aa8.55□□□□□ -1.04
VAPB-205ENST00000476395 ATF7IP2Q5U623 682 aa8.55□□□□□ -1.04
VAPB-205ENST00000476395 DARS2Q6PI48 645 aaKnown RBP8.55□□□□□ -1.04
VAPB-205ENST00000476395 KCNT2Q6UVM3 1135 aa8.55□□□□□ -1.04
VAPB-205ENST00000476395 BTLAQ7Z6A9 289 aa8.55□□□□□ -1.04
VAPB-205ENST00000476395 ERI1Q8IV48 349 aaKnown RBP8.55□□□□□ -1.04
VAPB-205ENST00000476395 NETO2Q8NC67 525 aa8.55□□□□□ -1.04
VAPB-205ENST00000476395 ZFRQ96KR1 1074 aaKnown RBP8.55□□□□□ -1.04
VAPB-205ENST00000476395 SNRNP25Q9BV90 132 aaKnown RBP8.55□□□□□ -1.04
VAPB-205ENST00000476395 B3GNT5Q9BYG0 378 aa8.55□□□□□ -1.04
VAPB-205ENST00000476395 MAFFQ9ULX9 164 aa8.55□□□□□ -1.04
VAPB-205ENST00000476395 MYO18AQ92614 2054 aaKnown RBP8.55□□□□□ -1.04
VAPB-205ENST00000476395 SCN4AP35499 1836 aa8.55□□□□□ -1.04
VAPB-205ENST00000476395 MCF2LO15068 1137 aa8.55□□□□□ -1.04
VAPB-205ENST00000476395 KLHL41O60662 606 aa8.55□□□□□ -1.04
VAPB-205ENST00000476395 CCDC159P0C7I6 412 aa8.55□□□□□ -1.04
VAPB-205ENST00000476395 GPD1P21695 349 aa8.55□□□□□ -1.04
VAPB-205ENST00000476395 NR4A1P22736 598 aa8.55□□□□□ -1.04
VAPB-205ENST00000476395 THOP1P52888 689 aa8.55□□□□□ -1.04
VAPB-205ENST00000476395 NR1H2P55055 460 aa8.55□□□□□ -1.04
VAPB-205ENST00000476395 BNIP3Q12983 259 aa8.55□□□□□ -1.04
VAPB-205ENST00000476395 HSP90AA5PQ58FG0 334 aa8.55□□□□□ -1.04
VAPB-205ENST00000476395 FGD3Q5JSP0 725 aa8.55□□□□□ -1.04
VAPB-205ENST00000476395 FAM102AQ5T9C2 384 aaPredicted RBP8.55□□□□□ -1.04
VAPB-205ENST00000476395 MROH9Q5TGP6 573 aa8.55□□□□□ -1.04
VAPB-205ENST00000476395 LCLAT1Q6UWP7 414 aa8.55□□□□□ -1.04
VAPB-205ENST00000476395 LBX2Q6XYB7 198 aa8.55□□□□□ -1.04
VAPB-205ENST00000476395 AHI1Q8N157 1196 aa8.55□□□□□ -1.04
VAPB-205ENST00000476395 MCUQ8NE86 351 aa8.55□□□□□ -1.04
VAPB-205ENST00000476395 CENPIQ92674 756 aaPredicted RBP8.55□□□□□ -1.04
VAPB-205ENST00000476395 PGBD4Q96DM1 585 aa8.55□□□□□ -1.04
VAPB-205ENST00000476395 COX4I2Q96KJ9 171 aa8.55□□□□□ -1.04
VAPB-205ENST00000476395 TCHPQ9BT92 498 aa8.55□□□□□ -1.04
VAPB-205ENST00000476395 CCDC68Q9H2F9 335 aa8.55□□□□□ -1.04
VAPB-205ENST00000476395 PDZD7Q9H5P4 517 aa8.55□□□□□ -1.04
VAPB-205ENST00000476395 SPON1Q9HCB6 807 aa8.55□□□□□ -1.04
VAPB-205ENST00000476395 ZC3H7BQ9UGR2 993 aaKnown RBP8.55□□□□□ -1.04
VAPB-205ENST00000476395 NOX1Q9Y5S8 564 aa8.55□□□□□ -1.04
VAPB-205ENST00000476395 M0QYV0 167 aa8.54□□□□□ -1.04
VAPB-205ENST00000476395 TRDMT1O14717 391 aaKnown RBP8.54□□□□□ -1.04
VAPB-205ENST00000476395 AIM2O14862 343 aa8.54□□□□□ -1.04
VAPB-205ENST00000476395 CFLARO15519 480 aa8.54□□□□□ -1.04
VAPB-205ENST00000476395 PAPSS1O43252 624 aaPredicted RBP8.54□□□□□ -1.04
VAPB-205ENST00000476395 INHBAP08476 426 aa8.54□□□□□ -1.04
VAPB-205ENST00000476395 SNRPAP09012 282 aaKnown RBP8.54□□□□□ -1.04
VAPB-205ENST00000476395 CD19P15391 556 aa8.54□□□□□ -1.04
VAPB-205ENST00000476395 EFNA5P52803 228 aa8.54□□□□□ -1.04
VAPB-205ENST00000476395 CRADDP78560 199 aa8.54□□□□□ -1.04
VAPB-205ENST00000476395 OLIG2Q13516 323 aa8.54□□□□□ -1.04
VAPB-205ENST00000476395 SURF1Q15526 300 aa8.54□□□□□ -1.04
VAPB-205ENST00000476395 LDLRAP1Q5SW96 308 aa8.54□□□□□ -1.04
VAPB-205ENST00000476395 PPP1R26Q5T8A7 1209 aaPredicted RBP8.54□□□□□ -1.04
VAPB-205ENST00000476395 IER5Q5VY09 327 aa8.54□□□□□ -1.04
VAPB-205ENST00000476395 SMYD5Q6GMV2 418 aa8.54□□□□□ -1.04
VAPB-205ENST00000476395 CCSAPQ6IQ19 270 aaPredicted RBP8.54□□□□□ -1.04
VAPB-205ENST00000476395 CRLF3Q8IUI8 442 aa8.54□□□□□ -1.04
VAPB-205ENST00000476395 TP53INP2Q8IXH6 220 aa8.54□□□□□ -1.04
VAPB-205ENST00000476395 MICALL2Q8IY33 904 aa8.54□□□□□ -1.04
VAPB-205ENST00000476395 COPS5Q92905 334 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms