RNA–Protein interactions for RNA: ENST00000476379.5

CCDC39-204, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 4,451 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-204ENST00000476379 KATNAL1Q9BW62 490 aa5.08□□□□□ -1.6
CCDC39-204ENST00000476379 ING2Q9H160 280 aa5.08□□□□□ -1.6
CCDC39-204ENST00000476379 MROH8Q9H579 483 aa5.08□□□□□ -1.6
CCDC39-204ENST00000476379 WDCPQ9H6R7 721 aa5.08□□□□□ -1.6
CCDC39-204ENST00000476379 NRDE2Q9H7Z3 1164 aa5.08□□□□□ -1.6
CCDC39-204ENST00000476379 SLC5A4Q9NY91 659 aa5.08□□□□□ -1.6
CCDC39-204ENST00000476379 SENP1Q9P0U3 644 aa5.08□□□□□ -1.6
CCDC39-204ENST00000476379 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.08□□□□□ -1.6
CCDC39-204ENST00000476379 KCNH4Q9UQ05 1017 aa5.08□□□□□ -1.6
CCDC39-204ENST00000476379 PTGDR2Q9Y5Y4 395 aa5.08□□□□□ -1.6
CCDC39-204ENST00000476379 NUMBLQ9Y6R0 609 aa5.08□□□□□ -1.6
CCDC39-204ENST00000476379 RP1P56715 2156 aa5.08□□□□□ -1.6
CCDC39-204ENST00000476379 SDR42E2A6NKP2 422 aa5.08□□□□□ -1.6
CCDC39-204ENST00000476379 PTGES3LE9PB15 166 aa5.08□□□□□ -1.6
CCDC39-204ENST00000476379 GLRA3O75311 464 aa5.08□□□□□ -1.6
CCDC39-204ENST00000476379 FARP2O94887 1054 aaPredicted RBP5.08□□□□□ -1.6
CCDC39-204ENST00000476379 CKMT2P17540 419 aa5.08□□□□□ -1.6
CCDC39-204ENST00000476379 CYP2C18P33260 490 aa5.08□□□□□ -1.6
CCDC39-204ENST00000476379 GATMP50440 423 aa5.08□□□□□ -1.6
CCDC39-204ENST00000476379 EFNA5P52803 228 aa5.08□□□□□ -1.6
CCDC39-204ENST00000476379 CASP9P55211 416 aa5.08□□□□□ -1.6
CCDC39-204ENST00000476379 MRPS35P82673 323 aaKnown RBP5.08□□□□□ -1.6
CCDC39-204ENST00000476379 TWF1Q12792 350 aa5.08□□□□□ -1.6
CCDC39-204ENST00000476379 MAP2K5Q13163 448 aa5.08□□□□□ -1.6
CCDC39-204ENST00000476379 PTK2BQ14289 1009 aa5.08□□□□□ -1.6
CCDC39-204ENST00000476379 MXD4Q14582 209 aaPredicted RBP5.08□□□□□ -1.6
CCDC39-204ENST00000476379 SOWAHAQ2M3V2 549 aa5.08□□□□□ -1.6
CCDC39-204ENST00000476379 SLC9B1Q4ZJI4 515 aa5.08□□□□□ -1.6
CCDC39-204ENST00000476379 SMYD5Q6GMV2 418 aa5.08□□□□□ -1.6
CCDC39-204ENST00000476379 PLEKHA7Q6IQ23 1121 aa5.08□□□□□ -1.6
CCDC39-204ENST00000476379 ABHD15Q6UXT9 468 aa5.08□□□□□ -1.6
CCDC39-204ENST00000476379 ZNF598Q86UK7 904 aaKnown RBP5.08□□□□□ -1.6
CCDC39-204ENST00000476379 RIOX2Q8IUF8 465 aa5.08□□□□□ -1.6
CCDC39-204ENST00000476379 WDR49Q8IV35 697 aa5.08□□□□□ -1.6
CCDC39-204ENST00000476379 CFAP52Q8N1V2 620 aa5.08□□□□□ -1.6
CCDC39-204ENST00000476379 P2RY11Q96G91 374 aa5.08□□□□□ -1.6
CCDC39-204ENST00000476379 SH3GL3Q99963 347 aa5.08□□□□□ -1.6
CCDC39-204ENST00000476379 C20orf27Q9GZN8 174 aa5.08□□□□□ -1.6
CCDC39-204ENST00000476379 TKTL2Q9H0I9 626 aa5.08□□□□□ -1.6
CCDC39-204ENST00000476379 FAM96AQ9H5X1 160 aa5.08□□□□□ -1.6
CCDC39-204ENST00000476379 ALG9Q9H6U8 611 aa5.08□□□□□ -1.6
CCDC39-204ENST00000476379 COG4Q9H9E3 785 aa5.08□□□□□ -1.6
CCDC39-204ENST00000476379 PCDH18Q9HCL0 1135 aa5.08□□□□□ -1.6
CCDC39-204ENST00000476379 SEMA4BQ9NPR2 832 aaPredicted RBP5.08□□□□□ -1.6
CCDC39-204ENST00000476379 ARHGEF3Q9NR81 526 aa5.08□□□□□ -1.6
CCDC39-204ENST00000476379 ARHGEF38Q9NXL2 777 aa5.08□□□□□ -1.6
CCDC39-204ENST00000476379 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP5.08□□□□□ -1.6
CCDC39-204ENST00000476379 ERAP1Q9NZ08 941 aa5.08□□□□□ -1.6
CCDC39-204ENST00000476379 GMPR2Q9P2T1 348 aaKnown RBP5.08□□□□□ -1.6
CCDC39-204ENST00000476379 XPR1Q9UBH6 696 aa5.08□□□□□ -1.6
CCDC39-204ENST00000476379 VPS4AQ9UN37 437 aa5.08□□□□□ -1.6
CCDC39-204ENST00000476379 SOX13Q9UN79 622 aa5.08□□□□□ -1.6
CCDC39-204ENST00000476379 STARD13Q9Y3M8 1113 aa5.08□□□□□ -1.6
CCDC39-204ENST00000476379 PPP2R3BQ9Y5P8 575 aa5.08□□□□□ -1.6
CCDC39-204ENST00000476379 NAV1Q8NEY1 1877 aa5.08□□□□□ -1.6
CCDC39-204ENST00000476379 SPAG17Q6Q759 2223 aa5.08□□□□□ -1.6
CCDC39-204ENST00000476379 FAM186AA6NE01 2351 aa5.08□□□□□ -1.6
CCDC39-204ENST00000476379 PDLIM1O00151 329 aa5.08□□□□□ -1.6
CCDC39-204ENST00000476379 NRP2O60462 931 aa5.08□□□□□ -1.6
CCDC39-204ENST00000476379 GMNNO75496 209 aa5.08□□□□□ -1.6
CCDC39-204ENST00000476379 TIPRLO75663 272 aa5.08□□□□□ -1.6
CCDC39-204ENST00000476379 ITGA2BP08514 1039 aa5.08□□□□□ -1.6
CCDC39-204ENST00000476379 TFPTP0C1Z6 253 aa5.08□□□□□ -1.6
CCDC39-204ENST00000476379 IQCF3P0C7M6 154 aa5.08□□□□□ -1.6
CCDC39-204ENST00000476379 ALDH4A1P30038 563 aa5.08□□□□□ -1.6
CCDC39-204ENST00000476379 WEE1P30291 646 aa5.08□□□□□ -1.6
CCDC39-204ENST00000476379 PSMD7P51665 324 aa5.08□□□□□ -1.6
CCDC39-204ENST00000476379 RTP1P59025 263 aa5.08□□□□□ -1.6
CCDC39-204ENST00000476379 EFEMP1Q12805 493 aa5.08□□□□□ -1.6
CCDC39-204ENST00000476379 ZNF268Q14587 947 aaPredicted RBP5.08□□□□□ -1.6
CCDC39-204ENST00000476379 C16orf72Q14CZ0 275 aa5.08□□□□□ -1.6
CCDC39-204ENST00000476379 UAP1L1Q3KQV9 507 aa5.08□□□□□ -1.6
CCDC39-204ENST00000476379 IER5Q5VY09 327 aa5.08□□□□□ -1.6
CCDC39-204ENST00000476379 BTBD8Q5XKL5 378 aa5.08□□□□□ -1.6
CCDC39-204ENST00000476379 ITPRIPL1Q6GPH6 555 aa5.08□□□□□ -1.6
CCDC39-204ENST00000476379 RBM44Q6ZP01 1051 aaKnown RBP5.08□□□□□ -1.6
CCDC39-204ENST00000476379 ZNF572Q7Z3I7 529 aaPredicted RBP5.08□□□□□ -1.6
CCDC39-204ENST00000476379 KCNMB4Q86W47 210 aa5.08□□□□□ -1.6
CCDC39-204ENST00000476379 HEATR4Q86WZ0 1026 aa5.08□□□□□ -1.6
CCDC39-204ENST00000476379 NT5DC4Q86YG4 428 aa5.08□□□□□ -1.6
CCDC39-204ENST00000476379 ADGRF2Q8IZF7 708 aa5.08□□□□□ -1.6
CCDC39-204ENST00000476379 SLC4A11Q8NBS3 891 aa5.08□□□□□ -1.6
CCDC39-204ENST00000476379 OR6Y1Q8NGX8 325 aa5.08□□□□□ -1.6
CCDC39-204ENST00000476379 PIWIL2Q8TC59 973 aaKnown RBP5.08□□□□□ -1.6
CCDC39-204ENST00000476379 CD101Q93033 1021 aa5.08□□□□□ -1.6
CCDC39-204ENST00000476379 SLC7A6OSQ96CW6 309 aaPredicted RBP5.08□□□□□ -1.6
CCDC39-204ENST00000476379 FEM1CQ96JP0 617 aa5.08□□□□□ -1.6
CCDC39-204ENST00000476379 EGFL8Q99944 293 aa5.08□□□□□ -1.6
CCDC39-204ENST00000476379 TMEM79Q9BSE2 394 aa5.08□□□□□ -1.6
CCDC39-204ENST00000476379 ROGDIQ9GZN7 287 aa5.08□□□□□ -1.6
CCDC39-204ENST00000476379 SP110Q9HB58 689 aa5.08□□□□□ -1.6
CCDC39-204ENST00000476379 NDFIP2Q9NV92 336 aa5.08□□□□□ -1.6
CCDC39-204ENST00000476379 DDX43Q9NXZ2 648 aaKnown RBP5.08□□□□□ -1.6
CCDC39-204ENST00000476379 EPS15L1Q9UBC2 864 aa5.08□□□□□ -1.6
CCDC39-204ENST00000476379 TIMM22Q9Y584 194 aa5.08□□□□□ -1.6
CCDC39-204ENST00000476379 C3orf70A6NLC5 250 aaPredicted RBP5.07□□□□□ -1.6
CCDC39-204ENST00000476379 IQCF5A8MTL0 148 aa5.07□□□□□ -1.6
CCDC39-204ENST00000476379 BTNL10A8MVZ5 291 aa5.07□□□□□ -1.6
CCDC39-204ENST00000476379 KCNU1A8MYU2 1149 aa5.07□□□□□ -1.6
CCDC39-204ENST00000476379 MYO1GB0I1T2 1018 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms