RNA–Protein interactions for RNA: ENST00000475973.1

UBR4-212, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 600 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-212ENST00000475973 PIDD1Q9HB75 910 aa7.03□□□□□ -1.28
UBR4-212ENST00000475973 RAB6BQ9NRW1 208 aa7.03□□□□□ -1.28
UBR4-212ENST00000475973 DLGAP2Q9P1A6 1054 aa7.03□□□□□ -1.28
UBR4-212ENST00000475973 ARMCX1Q9P291 453 aa7.03□□□□□ -1.28
UBR4-212ENST00000475973 IGSF9Q9P2J2 1179 aa7.03□□□□□ -1.28
UBR4-212ENST00000475973 HMGXB4Q9UGU5 601 aa7.03□□□□□ -1.28
UBR4-212ENST00000475973 DCDC2Q9UHG0 476 aa7.03□□□□□ -1.28
UBR4-212ENST00000475973 SCOCQ9UIL1 159 aa7.03□□□□□ -1.28
UBR4-212ENST00000475973 ADAM28Q9UKQ2 775 aa7.03□□□□□ -1.28
UBR4-212ENST00000475973 DERAQ9Y315 318 aa7.03□□□□□ -1.28
UBR4-212ENST00000475973 NME7Q9Y5B8 376 aa7.03□□□□□ -1.28
UBR4-212ENST00000475973 SEC23IPQ9Y6Y8 1000 aaKnown RBP7.03□□□□□ -1.28
UBR4-212ENST00000475973 LAMA2P24043 3122 aaKnown RBP7.03□□□□□ -1.28
UBR4-212ENST00000475973 NRCAMQ92823 1304 aa7.02□□□□□ -1.28
UBR4-212ENST00000475973 C2orf71A6NGG8 1288 aa7.02□□□□□ -1.29
UBR4-212ENST00000475973 LACTBL1A8MY62 500 aa7.02□□□□□ -1.29
UBR4-212ENST00000475973 TARM1B6A8C7 271 aa7.02□□□□□ -1.29
UBR4-212ENST00000475973 H0Y3Z8 333 aa7.02□□□□□ -1.29
UBR4-212ENST00000475973 I3L4J1 428 aa7.02□□□□□ -1.29
UBR4-212ENST00000475973 APOL1O14791 398 aa7.02□□□□□ -1.29
UBR4-212ENST00000475973 HGSO14964 777 aaPredicted RBP7.02□□□□□ -1.29
UBR4-212ENST00000475973 PAPSS1O43252 624 aaPredicted RBP7.02□□□□□ -1.29
UBR4-212ENST00000475973 ITM2AO43736 263 aa7.02□□□□□ -1.29
UBR4-212ENST00000475973 CACNG3O60359 315 aa7.02□□□□□ -1.29
UBR4-212ENST00000475973 NBNO60934 754 aa7.02□□□□□ -1.29
UBR4-212ENST00000475973 STK10O94804 968 aaKnown RBP7.02□□□□□ -1.29
UBR4-212ENST00000475973 GJB5O95377 273 aa7.02□□□□□ -1.29
UBR4-212ENST00000475973 C22orf31O95567 290 aa7.02□□□□□ -1.29
UBR4-212ENST00000475973 SERPINE1P05121 402 aa7.02□□□□□ -1.29
UBR4-212ENST00000475973 CTSHP09668 335 aa7.02□□□□□ -1.29
UBR4-212ENST00000475973 FAM163BP0C2L3 166 aa7.02□□□□□ -1.29
UBR4-212ENST00000475973 MYOGP15173 224 aa7.02□□□□□ -1.29
UBR4-212ENST00000475973 PDGFRAP16234 1089 aa7.02□□□□□ -1.29
UBR4-212ENST00000475973 TCF7P36402 384 aaPredicted RBP7.02□□□□□ -1.29
UBR4-212ENST00000475973 FDFT1P37268 417 aa7.02□□□□□ -1.29
UBR4-212ENST00000475973 GRM5P41594 1212 aa7.02□□□□□ -1.29
UBR4-212ENST00000475973 IDH3AP50213 366 aa7.02□□□□□ -1.29
UBR4-212ENST00000475973 HK2P52789 917 aa7.02□□□□□ -1.29
UBR4-212ENST00000475973 CDH8P55286 799 aa7.02□□□□□ -1.29
UBR4-212ENST00000475973 RAB15P59190 212 aa7.02□□□□□ -1.29
UBR4-212ENST00000475973 AP2B1P63010 937 aa7.02□□□□□ -1.29
UBR4-212ENST00000475973 DYNLT1P63172 113 aa7.02□□□□□ -1.29
UBR4-212ENST00000475973 BASP1P80723 227 aaKnown RBP7.02□□□□□ -1.29
UBR4-212ENST00000475973 PDE1BQ01064 536 aa7.02□□□□□ -1.29
UBR4-212ENST00000475973 SLC6A3Q01959 620 aa7.02□□□□□ -1.29
UBR4-212ENST00000475973 STX3Q13277 289 aa7.02□□□□□ -1.29
UBR4-212ENST00000475973 LSAMPQ13449 338 aa7.02□□□□□ -1.29
UBR4-212ENST00000475973 ITGA9Q13797 1035 aa7.02□□□□□ -1.29
UBR4-212ENST00000475973 PDE1CQ14123 709 aaPredicted RBP7.02□□□□□ -1.29
UBR4-212ENST00000475973 ADGRE1Q14246 886 aa7.02□□□□□ -1.29
UBR4-212ENST00000475973 PCLAFQ15004 111 aa7.02□□□□□ -1.29
UBR4-212ENST00000475973 ZRSR2Q15696 482 aaKnown RBP7.02□□□□□ -1.29
UBR4-212ENST00000475973 CHI3L2Q15782 390 aa7.02□□□□□ -1.29
UBR4-212ENST00000475973 CCDC85BQ15834 202 aaPredicted RBP7.02□□□□□ -1.29
UBR4-212ENST00000475973 SEPT7Q16181 437 aaKnown RBP7.02□□□□□ -1.29
UBR4-212ENST00000475973 CA9Q16790 459 aa7.02□□□□□ -1.29
UBR4-212ENST00000475973 TRIM71Q2Q1W2 868 aaKnown RBP7.02□□□□□ -1.29
UBR4-212ENST00000475973 MUM1Q2TAK8 710 aa7.02□□□□□ -1.29
UBR4-212ENST00000475973 LIN52Q52LA3 116 aa7.02□□□□□ -1.29
UBR4-212ENST00000475973 ZNF394Q53GI3 561 aa7.02□□□□□ -1.29
UBR4-212ENST00000475973 SH2D4BQ5SQS7 431 aa7.02□□□□□ -1.29
UBR4-212ENST00000475973 THEMIS2Q5TEJ8 643 aa7.02□□□□□ -1.29
UBR4-212ENST00000475973 EPGNQ6UW88 154 aa7.02□□□□□ -1.29
UBR4-212ENST00000475973 UGT2A3Q6UWM9 527 aa7.02□□□□□ -1.29
UBR4-212ENST00000475973 PACS1Q6VY07 963 aa7.02□□□□□ -1.29
UBR4-212ENST00000475973 CAPN12Q6ZSI9 719 aa7.02□□□□□ -1.29
UBR4-212ENST00000475973 STRADAQ7RTN6 431 aa7.02□□□□□ -1.29
UBR4-212ENST00000475973 LCA5Q86VQ0 697 aa7.02□□□□□ -1.29
UBR4-212ENST00000475973 UNC93AQ86WB7 457 aa7.02□□□□□ -1.29
UBR4-212ENST00000475973 TTC30AQ86WT1 665 aa7.02□□□□□ -1.29
UBR4-212ENST00000475973 ARID3BQ8IVW6 561 aaPredicted RBP7.02□□□□□ -1.29
UBR4-212ENST00000475973 TMEM192Q8IY95 271 aa7.02□□□□□ -1.29
UBR4-212ENST00000475973 CRYBG2Q8N1P7 616 aa7.02□□□□□ -1.29
UBR4-212ENST00000475973 MARVELD2Q8N4S9 558 aa7.02□□□□□ -1.29
UBR4-212ENST00000475973 CPSF7Q8N684 471 aaKnown RBP7.02□□□□□ -1.29
UBR4-212ENST00000475973 PPM1NQ8N819 430 aa7.02□□□□□ -1.29
UBR4-212ENST00000475973 RNF149Q8NC42 400 aa7.02□□□□□ -1.29
UBR4-212ENST00000475973 PIP4K2CQ8TBX8 421 aa7.02□□□□□ -1.29
UBR4-212ENST00000475973 IRGQQ8WZA9 623 aa7.02□□□□□ -1.29
UBR4-212ENST00000475973 VWCEQ96DN2 955 aa7.02□□□□□ -1.29
UBR4-212ENST00000475973 DUS3LQ96G46 650 aaKnown RBP7.02□□□□□ -1.29
UBR4-212ENST00000475973 RAD9AQ99638 391 aa7.02□□□□□ -1.29
UBR4-212ENST00000475973 EBF4Q9BQW3 602 aa7.02□□□□□ -1.29
UBR4-212ENST00000475973 ADPGKQ9BRR6 497 aa7.02□□□□□ -1.29
UBR4-212ENST00000475973 MECRQ9BV79 373 aa7.02□□□□□ -1.29
UBR4-212ENST00000475973 SPATA16Q9BXB7 569 aa7.02□□□□□ -1.29
UBR4-212ENST00000475973 YIPF3Q9GZM5 350 aa7.02□□□□□ -1.29
UBR4-212ENST00000475973 SMYD3Q9H7B4 428 aa7.02□□□□□ -1.29
UBR4-212ENST00000475973 MINDY3Q9H8M7 445 aa7.02□□□□□ -1.29
UBR4-212ENST00000475973 ZNF395Q9H8N7 513 aaPredicted RBP7.02□□□□□ -1.29
UBR4-212ENST00000475973 ALG13Q9NP73 1137 aaKnown RBP7.02□□□□□ -1.29
UBR4-212ENST00000475973 DMAP1Q9NPF5 467 aaPredicted RBP7.02□□□□□ -1.29
UBR4-212ENST00000475973 STAU2Q9NUL3 570 aaKnown RBP eCLIP7.02□□□□□ -1.29
UBR4-212ENST00000475973 PRMT7Q9NVM4 692 aaPredicted RBP7.02□□□□□ -1.29
UBR4-212ENST00000475973 PLK2Q9NYY3 685 aa7.02□□□□□ -1.29
UBR4-212ENST00000475973 ERAP1Q9NZ08 941 aa7.02□□□□□ -1.29
UBR4-212ENST00000475973 NDUFA13Q9P0J0 144 aa7.02□□□□□ -1.29
UBR4-212ENST00000475973 CAMSAP3Q9P1Y5 1249 aaPredicted RBP7.02□□□□□ -1.29
UBR4-212ENST00000475973 PCSK1NQ9UHG2 260 aa7.02□□□□□ -1.29
UBR4-212ENST00000475973 PPM1HQ9ULR3 514 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms